RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 IQCEQ6IPM2 695 aa10.89□□□□□ -0.67
FOXCUT-201ENST00000628509 CEP120Q8N960 986 aa10.89□□□□□ -0.67
FOXCUT-201ENST00000628509 PPP1R13LQ8WUF5 828 aa10.89□□□□□ -0.67
FOXCUT-201ENST00000628509 FAM193BQ96PV7 902 aaPredicted RBP10.89□□□□□ -0.67
FOXCUT-201ENST00000628509 HTATIP2Q9BUP3 242 aa10.89□□□□□ -0.67
FOXCUT-201ENST00000628509 EIF2AQ9BY44 585 aaKnown RBP10.89□□□□□ -0.67
FOXCUT-201ENST00000628509 MRPL9Q9BYD2 267 aaKnown RBP10.89□□□□□ -0.67
FOXCUT-201ENST00000628509 PDCL3Q9H2J4 239 aa10.89□□□□□ -0.67
FOXCUT-201ENST00000628509 NXF3Q9H4D5 531 aaKnown RBP10.89□□□□□ -0.67
FOXCUT-201ENST00000628509 CEP83Q9Y592 693 aa10.89□□□□□ -0.67
FOXCUT-201ENST00000628509 PCDHB7Q9Y5E2 793 aa10.89□□□□□ -0.67
FOXCUT-201ENST00000628509 FHOD1Q9Y613 1164 aa10.89□□□□□ -0.67
FOXCUT-201ENST00000628509 ATP8B3O60423 1300 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 EIF3CLB5ME19 914 aaKnown RBP10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 KRT86O43790 486 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 NOL4O94818 638 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 ITGB3P05106 788 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 NFICP08651 508 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 KRT5P13647 590 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 TNFAIP3P21580 790 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 TAF6P49848 677 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 KLK7P49862 253 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 JAM2P57087 298 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 CCZ1BP86790 482 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 CCZ1P86791 482 aaPredicted RBP10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 TLE2Q04725 743 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 CUL2Q13617 745 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 DSC3Q14574 896 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 STILQ15468 1287 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 IFI16Q16666 785 aaKnown RBP10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 ARHGAP44Q17R89 818 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 TRIM60Q495X7 471 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 ARHGAP29Q52LW3 1261 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 PLEKHG4Q58EX7 1191 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 ZBTB41Q5SVQ8 909 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 UBXN11Q5T124 520 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 PHLDB3Q6NSJ2 640 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 CNKSR3Q6P9H4 555 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 ALKAL1Q6UXT8 129 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 TRIM72Q6ZMU5 477 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 DPH6Q7L8W6 267 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 KIAA1328Q86T90 577 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 MSANTD4Q8NCY6 345 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 ZSWIM2Q8NEG5 633 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 LMO3Q8TAP4 145 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 SPATA18Q8TC71 538 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 PLEKHO2Q8TD55 490 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 UBE2Q2Q8WVN8 375 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 BAP1Q92560 729 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 HPDLQ96IR7 371 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 PAWRQ96IZ0 340 aaKnown RBP10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 EIF3CQ99613 913 aaKnown RBP10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 MCOLN1Q9GZU1 580 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 NHEJ1Q9H9Q4 299 aaPredicted RBP10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 SIX2Q9NPC8 291 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 KCND1Q9NSA2 647 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 TMEM161AQ9NX61 479 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 KIAA1257Q9ULG3 409 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 AGAP1Q9UPQ3 857 aa10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 EPN1Q9Y6I3 576 aaPredicted RBP10.88□□□□□ -0.67
FOXCUT-201ENST00000628509 SMIM28A0A1B0GU29 152 aa10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 ABHD14A-ACY1A0A1B0GW23 586 aa10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 TRAPPC3O43617 180 aa10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 NDUFA10O95299 355 aa10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 RAG1P15918 1043 aa10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 AKAP5P24588 427 aa10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 KIF5AQ12840 1032 aa10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 LRMPQ12912 555 aa10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 WDR72Q3MJ13 1102 aa10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 LMBRD2Q68DH5 695 aaPredicted RBP10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 ECHDC2Q86YB7 292 aa10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 EFCAB13Q8IY85 973 aa10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 SMG8Q8ND04 991 aaKnown RBP10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 OR5B17Q8NGF7 314 aa10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 KIAA1524Q8TCG1 905 aa10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 SHC3Q92529 594 aa10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 ZNF516Q92618 1163 aa10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 WNT8BQ93098 351 aa10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 TRIM11Q96F44 468 aa10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 MIS12Q9H081 205 aa10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 MTIF3Q9H2K0 278 aaKnown RBP10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 HAUS4Q9H6D7 363 aa10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 AGO3Q9H9G7 860 aaKnown RBP10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 DSEQ9UL01 958 aa10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 PCDHB4Q9Y5E5 795 aa10.87□□□□□ -0.67
FOXCUT-201ENST00000628509 EVI5O60447 810 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 HUS1O60921 280 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 BAIAP3O94812 1187 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 CXCL10P02778 98 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 PAEPP09466 180 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 LRPAP1P30533 357 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 POLR2BP30876 1174 aaKnown RBP10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 KIF11P52732 1056 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 MYL6P60660 151 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 ARID5AQ03989 594 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 RNASELQ05823 741 aaKnown RBP10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 FAAP100Q0VG06 881 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 TUSC3Q13454 348 aa10.86□□□□□ -0.67
FOXCUT-201ENST00000628509 ZBTB6Q15916 424 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms