RNA–Protein interactions for RNA: ENST00000628397.2

CCDC163-205, Transcript of coiled-coil domain containing 163, humanhuman

TSL 3

Gene CCDC163, Length 885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-205ENST00000628397 WDR44Q5JSH3 913 aa13.16□□□□□ -0.3
CCDC163-205ENST00000628397 SPOUT1Q5T280 376 aaKnown RBP13.16□□□□□ -0.3
CCDC163-205ENST00000628397 C9orf57Q5W0N0 161 aa13.16□□□□□ -0.3
CCDC163-205ENST00000628397 TRIM65Q6PJ69 517 aa13.16□□□□□ -0.3
CCDC163-205ENST00000628397 ZNF280BQ86YH2 543 aa13.16□□□□□ -0.3
CCDC163-205ENST00000628397 HERC6Q8IVU3 1022 aa13.16□□□□□ -0.3
CCDC163-205ENST00000628397 LRRC52Q8N7C0 313 aa13.16□□□□□ -0.3
CCDC163-205ENST00000628397 EHBP1Q8NDI1 1231 aa13.16□□□□□ -0.3
CCDC163-205ENST00000628397 NEK11Q8NG66 645 aa13.16□□□□□ -0.3
CCDC163-205ENST00000628397 SEMA4DQ92854 862 aa13.16□□□□□ -0.3
CCDC163-205ENST00000628397 ZNF689Q96CS4 500 aaPredicted RBP13.16□□□□□ -0.3
CCDC163-205ENST00000628397 DDX27Q96GQ7 796 aaKnown RBP13.16□□□□□ -0.3
CCDC163-205ENST00000628397 NT5C1BQ96P26 610 aa13.16□□□□□ -0.3
CCDC163-205ENST00000628397 GDF15Q99988 308 aa13.16□□□□□ -0.3
CCDC163-205ENST00000628397 PI4K2AQ9BTU6 479 aa13.16□□□□□ -0.3
CCDC163-205ENST00000628397 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.16□□□□□ -0.3
CCDC163-205ENST00000628397 CACNG4Q9UBN1 327 aa13.16□□□□□ -0.3
CCDC163-205ENST00000628397 SIX4Q9UIU6 781 aa13.16□□□□□ -0.3
CCDC163-205ENST00000628397 SIK3Q9Y2K2 1263 aa13.16□□□□□ -0.3
CCDC163-205ENST00000628397 NLRC5Q86WI3 1866 aa13.16□□□□□ -0.3
CCDC163-205ENST00000628397 ANO9A1A5B4 782 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 TLL1O43897 1013 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 DDHD2O94830 711 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 CST3P01034 146 aaPredicted RBP13.15□□□□□ -0.3
CCDC163-205ENST00000628397 TRIM21P19474 475 aaKnown RBP13.15□□□□□ -0.3
CCDC163-205ENST00000628397 PON1P27169 355 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 ATICP31939 592 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 OR1G1P47890 313 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 TAF6P49848 677 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 KLK7P49862 253 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 CLCNKBP51801 687 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 KCNMA1Q12791 1236 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 LRMPQ12912 555 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 SGSM1Q2NKQ1 1148 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 SV2CQ496J9 727 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 ZNF667Q5HYK9 610 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 RASIP1Q5U651 963 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 VSTM4Q8IW00 320 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 DRC7Q8IY82 874 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 COLGALT2Q8IYK4 626 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 TAF4BQ92750 862 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 HPDLQ96IR7 371 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 TMEM175Q9BSA9 504 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 NRDE2Q9H7Z3 1164 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 RC3H2Q9HBD1 1191 aaKnown RBP13.15□□□□□ -0.3
CCDC163-205ENST00000628397 FAM207AQ9NSI2 230 aaPredicted RBP13.15□□□□□ -0.3
CCDC163-205ENST00000628397 HCSTQ9UBK5 93 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 DNAJB4Q9UDY4 337 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 INSL6Q9Y581 213 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 NUB1Q9Y5A7 615 aa13.15□□□□□ -0.3
CCDC163-205ENST00000628397 ITIH6Q6UXX5 1313 aa13.14□□□□□ -0.31
CCDC163-205ENST00000628397 PIRO00625 290 aa13.14□□□□□ -0.31
CCDC163-205ENST00000628397 PPEF2O14830 753 aa13.14□□□□□ -0.31
CCDC163-205ENST00000628397 B4GALT3O60512 393 aa13.14□□□□□ -0.31
CCDC163-205ENST00000628397 LRRN2O75325 713 aa13.14□□□□□ -0.31
CCDC163-205ENST00000628397 ASS1P00966 412 aaKnown RBP13.14□□□□□ -0.31
CCDC163-205ENST00000628397 P4HA1P13674 534 aa13.14□□□□□ -0.31
CCDC163-205ENST00000628397 CDC25BP30305 580 aa13.14□□□□□ -0.31
CCDC163-205ENST00000628397 PBX1P40424 430 aa13.14□□□□□ -0.31
CCDC163-205ENST00000628397 TNNC1P63316 161 aa13.14□□□□□ -0.31
CCDC163-205ENST00000628397 HTRA4P83105 476 aaPredicted RBP13.14□□□□□ -0.31
CCDC163-205ENST00000628397 MLLT1Q03111 559 aaPredicted RBP13.14□□□□□ -0.31
CCDC163-205ENST00000628397 UPP1Q16831 310 aa13.14□□□□□ -0.31
CCDC163-205ENST00000628397 SPECC1LQ69YQ0 1117 aa13.14□□□□□ -0.31
CCDC163-205ENST00000628397 SPOPLQ6IQ16 392 aa13.14□□□□□ -0.31
CCDC163-205ENST00000628397 TMC6Q7Z403 805 aa13.14□□□□□ -0.31
CCDC163-205ENST00000628397 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.14□□□□□ -0.31
CCDC163-205ENST00000628397 PPM1KQ8N3J5 372 aa13.14□□□□□ -0.31
CCDC163-205ENST00000628397 LMO3Q8TAP4 145 aa13.14□□□□□ -0.31
CCDC163-205ENST00000628397 CXorf38Q8TB03 319 aa13.14□□□□□ -0.31
CCDC163-205ENST00000628397 RABGGTAQ92696 567 aa13.14□□□□□ -0.31
CCDC163-205ENST00000628397 PAAF1Q9BRP4 392 aa13.14□□□□□ -0.31
CCDC163-205ENST00000628397 NUP58Q9BVL2 599 aa13.14□□□□□ -0.31
CCDC163-205ENST00000628397 APEX2Q9UBZ4 518 aa13.14□□□□□ -0.31
CCDC163-205ENST00000628397 PRG3Q9Y2Y8 225 aaPredicted RBP13.14□□□□□ -0.31
CCDC163-205ENST00000628397 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.14□□□□□ -0.31
CCDC163-205ENST00000628397 MRPL42Q9Y6G3 142 aaKnown RBP13.14□□□□□ -0.31
CCDC163-205ENST00000628397 TSC2P49815 1807 aa13.13□□□□□ -0.31
CCDC163-205ENST00000628397 GOLGA6L6A8MZA4 724 aa13.13□□□□□ -0.31
CCDC163-205ENST00000628397 B3GAT3O94766 335 aa13.13□□□□□ -0.31
CCDC163-205ENST00000628397 STAU1O95793 577 aaKnown RBP13.13□□□□□ -0.31
CCDC163-205ENST00000628397 TPM1P09493 284 aa13.13□□□□□ -0.31
CCDC163-205ENST00000628397 LAG3P18627 525 aa13.13□□□□□ -0.31
CCDC163-205ENST00000628397 RFX1P22670 979 aa13.13□□□□□ -0.31
CCDC163-205ENST00000628397 TBXAS1P24557 533 aaPredicted RBP13.13□□□□□ -0.31
CCDC163-205ENST00000628397 SLC11A1P49279 550 aa13.13□□□□□ -0.31
CCDC163-205ENST00000628397 APBA1Q02410 837 aa13.13□□□□□ -0.31
CCDC163-205ENST00000628397 TRIM14Q14142 442 aa13.13□□□□□ -0.31
CCDC163-205ENST00000628397 WDR72Q3MJ13 1102 aa13.13□□□□□ -0.31
CCDC163-205ENST00000628397 SCARA3Q6AZY7 606 aa13.13□□□□□ -0.31
CCDC163-205ENST00000628397 DCLRE1AQ6PJP8 1040 aa13.13□□□□□ -0.31
CCDC163-205ENST00000628397 SCARA5Q6ZMJ2 495 aa13.13□□□□□ -0.31
CCDC163-205ENST00000628397 ARHGEF19Q8IW93 802 aa13.13□□□□□ -0.31
CCDC163-205ENST00000628397 FIBCD1Q8N539 461 aa13.13□□□□□ -0.31
CCDC163-205ENST00000628397 HASPINQ8TF76 798 aa13.13□□□□□ -0.31
CCDC163-205ENST00000628397 ELMO3Q96BJ8 720 aa13.13□□□□□ -0.31
CCDC163-205ENST00000628397 IQCDQ96DY2 449 aa13.13□□□□□ -0.31
CCDC163-205ENST00000628397 FAM81BQ96LP2 452 aa13.13□□□□□ -0.31
CCDC163-205ENST00000628397 ZNF558Q96NG5 402 aa13.13□□□□□ -0.31
CCDC163-205ENST00000628397 RAD9AQ99638 391 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms