RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 FAM186BQ8IYM0 893 aa15.93■□□□□ 0.14
PNKP-221ENST00000627317 RNF168Q8IYW5 571 aaPredicted RBP15.93■□□□□ 0.14
PNKP-221ENST00000627317 CSGALNACT2Q8N6G5 542 aa15.93■□□□□ 0.14
PNKP-221ENST00000627317 BEST2Q8NFU1 509 aa15.93■□□□□ 0.14
PNKP-221ENST00000627317 MICAL1Q8TDZ2 1067 aa15.93■□□□□ 0.14
PNKP-221ENST00000627317 C18orf25Q96B23 403 aaPredicted RBP15.93■□□□□ 0.14
PNKP-221ENST00000627317 EEF2KMTQ96G04 330 aa15.93■□□□□ 0.14
PNKP-221ENST00000627317 TMEM169Q96HH4 297 aa15.93■□□□□ 0.14
PNKP-221ENST00000627317 FNBP1Q96RU3 617 aa15.93■□□□□ 0.14
PNKP-221ENST00000627317 PDE11AQ9HCR9 933 aa15.93■□□□□ 0.14
PNKP-221ENST00000627317 BARX2Q9UMQ3 279 aaPredicted RBP15.93■□□□□ 0.14
PNKP-221ENST00000627317 UBQLN1Q9UMX0 589 aaKnown RBP15.93■□□□□ 0.14
PNKP-221ENST00000627317 PRG3Q9Y2Y8 225 aaPredicted RBP15.93■□□□□ 0.14
PNKP-221ENST00000627317 DERAQ9Y315 318 aa15.93■□□□□ 0.14
PNKP-221ENST00000627317 C2CD2Q9Y426 696 aa15.93■□□□□ 0.14
PNKP-221ENST00000627317 ANK1P16157 1881 aa15.93■□□□□ 0.14
PNKP-221ENST00000627317 PDCD11Q14690 1871 aaKnown RBP15.93■□□□□ 0.14
PNKP-221ENST00000627317 SYCE3A1L190 88 aa15.92■□□□□ 0.14
PNKP-221ENST00000627317 FSD2A1L4K1 749 aa15.92■□□□□ 0.14
PNKP-221ENST00000627317 MAPK13O15264 365 aa15.92■□□□□ 0.14
PNKP-221ENST00000627317 SLC16A3O15427 465 aaKnown RBP15.92■□□□□ 0.14
PNKP-221ENST00000627317 MBTPS2O43462 519 aa15.92■□□□□ 0.14
PNKP-221ENST00000627317 AKAP3O75969 853 aa15.92■□□□□ 0.14
PNKP-221ENST00000627317 FGFR1OPO95684 399 aaKnown RBP15.92■□□□□ 0.14
PNKP-221ENST00000627317 CCDC192P0DO97 292 aa15.92■□□□□ 0.14
PNKP-221ENST00000627317 DLATP10515 647 aaKnown RBP15.92■□□□□ 0.14
PNKP-221ENST00000627317 CTSAP10619 480 aa15.92■□□□□ 0.14
PNKP-221ENST00000627317 KRT13P13646 458 aa15.92■□□□□ 0.14
PNKP-221ENST00000627317 PSMC2P35998 433 aaKnown RBP15.92■□□□□ 0.14
PNKP-221ENST00000627317 TFAMQ00059 246 aaKnown RBP15.92■□□□□ 0.14
PNKP-221ENST00000627317 SMC1AQ14683 1233 aaKnown RBP15.92■□□□□ 0.14
PNKP-221ENST00000627317 PSMD6Q15008 389 aa15.92■□□□□ 0.14
PNKP-221ENST00000627317 NAB2Q15742 525 aa15.92■□□□□ 0.14
PNKP-221ENST00000627317 TPD52L1Q16890 204 aaPredicted RBP15.92■□□□□ 0.14
PNKP-221ENST00000627317 CT47A1Q5JQC4 288 aaPredicted RBP15.92■□□□□ 0.14
PNKP-221ENST00000627317 NT5DC4Q86YG4 428 aa15.92■□□□□ 0.14
PNKP-221ENST00000627317 ZC3H3Q8IXZ2 948 aaKnown RBP15.92■□□□□ 0.14
PNKP-221ENST00000627317 VPS52Q8N1B4 723 aa15.92■□□□□ 0.14
PNKP-221ENST00000627317 CCDC127Q96BQ5 260 aa15.92■□□□□ 0.14
PNKP-221ENST00000627317 CEP63Q96MT8 703 aa15.92■□□□□ 0.14
PNKP-221ENST00000627317 DUSP9Q99956 384 aaKnown RBP15.92■□□□□ 0.14
PNKP-221ENST00000627317 MKNK1Q9BUB5 465 aa15.92■□□□□ 0.14
PNKP-221ENST00000627317 TUBGCP4Q9UGJ1 667 aa15.92■□□□□ 0.14
PNKP-221ENST00000627317 CD207Q9UJ71 328 aa15.92■□□□□ 0.14
PNKP-221ENST00000627317 FAN1Q9Y2M0 1017 aa15.92■□□□□ 0.14
PNKP-221ENST00000627317 F8W810 466 aa15.91■□□□□ 0.14
PNKP-221ENST00000627317 NRP1O14786 923 aa15.91■□□□□ 0.14
PNKP-221ENST00000627317 LILRB3O75022 631 aa15.91■□□□□ 0.14
PNKP-221ENST00000627317 TMEM191BP0C7N4 346 aa15.91■□□□□ 0.14
PNKP-221ENST00000627317 ERCC5P28715 1186 aaPredicted RBP15.91■□□□□ 0.14
PNKP-221ENST00000627317 NDUFV1P49821 464 aa15.91■□□□□ 0.14
PNKP-221ENST00000627317 WNT7BP56706 349 aa15.91■□□□□ 0.14
PNKP-221ENST00000627317 ZP2Q05996 745 aa15.91■□□□□ 0.14
PNKP-221ENST00000627317 SOX4Q06945 474 aaPredicted RBP15.91■□□□□ 0.14
PNKP-221ENST00000627317 PTPN14Q15678 1187 aa15.91■□□□□ 0.14
PNKP-221ENST00000627317 CLUL1Q15846 466 aa15.91■□□□□ 0.14
PNKP-221ENST00000627317 ZSCAN23Q3MJ62 389 aa15.91■□□□□ 0.14
PNKP-221ENST00000627317 EP400NLQ6ZTU2 488 aa15.91■□□□□ 0.14
PNKP-221ENST00000627317 INTS8Q75QN2 995 aaKnown RBP15.91■□□□□ 0.14
PNKP-221ENST00000627317 TMC7Q7Z402 723 aa15.91■□□□□ 0.14
PNKP-221ENST00000627317 USP37Q86T82 979 aa15.91■□□□□ 0.14
PNKP-221ENST00000627317 EFCAB13Q8IY85 973 aa15.91■□□□□ 0.14
PNKP-221ENST00000627317 CACTINQ8WUQ7 758 aaKnown RBP15.91■□□□□ 0.14
PNKP-221ENST00000627317 AUTS2Q8WXX7 1259 aa15.91■□□□□ 0.14
PNKP-221ENST00000627317 MFSD14AQ96MC6 490 aa15.91■□□□□ 0.14
PNKP-221ENST00000627317 UROC1Q96N76 676 aa15.91■□□□□ 0.14
PNKP-221ENST00000627317 CGRRF1Q99675 332 aa15.91■□□□□ 0.14
PNKP-221ENST00000627317 GOLGA2P5Q9HBQ8 144 aa15.91■□□□□ 0.14
PNKP-221ENST00000627317 CACNG4Q9UBN1 327 aa15.91■□□□□ 0.14
PNKP-221ENST00000627317 TCF20Q9UGU0 1960 aaKnown RBP15.91■□□□□ 0.14
PNKP-221ENST00000627317 C19orf67A6NJJ6 358 aa15.9■□□□□ 0.14
PNKP-221ENST00000627317 CLASP2O75122 1294 aaKnown RBP15.9■□□□□ 0.14
PNKP-221ENST00000627317 ALDH2P05091 517 aa15.9■□□□□ 0.14
PNKP-221ENST00000627317 TNNI1P19237 187 aa15.9■□□□□ 0.14
PNKP-221ENST00000627317 CYP3A5P20815 502 aa15.9■□□□□ 0.14
PNKP-221ENST00000627317 CCDC40Q4G0X9 1142 aa15.9■□□□□ 0.14
PNKP-221ENST00000627317 SPATA1Q5VX52 437 aa15.9■□□□□ 0.14
PNKP-221ENST00000627317 LMBRD2Q68DH5 695 aaPredicted RBP15.9■□□□□ 0.14
PNKP-221ENST00000627317 C11orf57Q6ZUT1 292 aaPredicted RBP15.9■□□□□ 0.14
PNKP-221ENST00000627317 WDR49Q8IV35 697 aa15.9■□□□□ 0.14
PNKP-221ENST00000627317 SUSD6Q92537 303 aa15.9■□□□□ 0.14
PNKP-221ENST00000627317 RABGGTAQ92696 567 aa15.9■□□□□ 0.14
PNKP-221ENST00000627317 KHSRPQ92945 711 aaKnown RBP eCLIP15.9■□□□□ 0.14
PNKP-221ENST00000627317 DDX27Q96GQ7 796 aaKnown RBP15.9■□□□□ 0.14
PNKP-221ENST00000627317 ANKRD36BP1Q96IX9 119 aa15.9■□□□□ 0.14
PNKP-221ENST00000627317 COLEC11Q9BWP8 271 aa15.9■□□□□ 0.14
PNKP-221ENST00000627317 NAT10Q9H0A0 1025 aaKnown RBP15.9■□□□□ 0.14
PNKP-221ENST00000627317 DNAJC25Q9H1X3 360 aa15.9■□□□□ 0.14
PNKP-221ENST00000627317 S1PR5Q9H228 398 aa15.9■□□□□ 0.14
PNKP-221ENST00000627317 STK39Q9UEW8 545 aa15.9■□□□□ 0.14
PNKP-221ENST00000627317 PRKAG3Q9UGI9 489 aa15.9■□□□□ 0.14
PNKP-221ENST00000627317 PODXLO00592 558 aa15.89■□□□□ 0.13
PNKP-221ENST00000627317 TNNC2P02585 160 aa15.89■□□□□ 0.13
PNKP-221ENST00000627317 RPL9P32969 192 aaKnown RBP15.89■□□□□ 0.13
PNKP-221ENST00000627317 VAMP7P51809 220 aa15.89■□□□□ 0.13
PNKP-221ENST00000627317 GUCY2FP51841 1108 aa15.89■□□□□ 0.13
PNKP-221ENST00000627317 BFSP1Q12934 665 aa15.89■□□□□ 0.13
PNKP-221ENST00000627317 ZBTB6Q15916 424 aa15.89■□□□□ 0.13
PNKP-221ENST00000627317 ANO6Q4KMQ2 910 aa15.89■□□□□ 0.13
PNKP-221ENST00000627317 SYCE2Q6PIF2 218 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms