RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 ATXN1P54253 815 aaKnown RBP12.1□□□□□ -0.47
DDX41-218ENST00000625286 PDIA5Q14554 519 aa12.1□□□□□ -0.47
DDX41-218ENST00000625286 ZNF568Q3ZCX4 644 aa12.1□□□□□ -0.47
DDX41-218ENST00000625286 RINT1Q6NUQ1 792 aa12.1□□□□□ -0.47
DDX41-218ENST00000625286 RNF19BQ6ZMZ0 732 aa12.1□□□□□ -0.47
DDX41-218ENST00000625286 ATRIPQ8WXE1 791 aa12.1□□□□□ -0.47
DDX41-218ENST00000625286 C8orf76Q96K31 380 aa12.1□□□□□ -0.47
DDX41-218ENST00000625286 SUSD3Q96L08 255 aa12.1□□□□□ -0.47
DDX41-218ENST00000625286 NELL2Q99435 816 aa12.1□□□□□ -0.47
DDX41-218ENST00000625286 CCDC94Q9BW85 323 aaPredicted RBP12.1□□□□□ -0.47
DDX41-218ENST00000625286 LRRC3Q9BY71 257 aa12.1□□□□□ -0.47
DDX41-218ENST00000625286 CRISPLD1Q9H336 500 aa12.1□□□□□ -0.47
DDX41-218ENST00000625286 ZNF334Q9HCZ1 680 aaPredicted RBP12.1□□□□□ -0.47
DDX41-218ENST00000625286 NDRG2Q9UN36 371 aaKnown RBP12.1□□□□□ -0.47
DDX41-218ENST00000625286 SMG5Q9UPR3 1016 aaKnown RBP12.1□□□□□ -0.47
DDX41-218ENST00000625286 CHD8Q9HCK8 2581 aa12.1□□□□□ -0.47
DDX41-218ENST00000625286 PHLPP2Q6ZVD8 1323 aa12.1□□□□□ -0.47
DDX41-218ENST00000625286 SYN3O14994 580 aa12.09□□□□□ -0.47
DDX41-218ENST00000625286 SLC16A4O15374 487 aa12.09□□□□□ -0.47
DDX41-218ENST00000625286 LRG1P02750 347 aa12.09□□□□□ -0.47
DDX41-218ENST00000625286 MCF2P10911 925 aa12.09□□□□□ -0.47
DDX41-218ENST00000625286 MAGEA9P43362 315 aa12.09□□□□□ -0.47
DDX41-218ENST00000625286 YARSP54577 528 aaKnown RBP12.09□□□□□ -0.47
DDX41-218ENST00000625286 EPHA5P54756 1037 aa12.09□□□□□ -0.47
DDX41-218ENST00000625286 SPAG1Q07617 926 aa12.09□□□□□ -0.47
DDX41-218ENST00000625286 DMWDQ09019 674 aa12.09□□□□□ -0.47
DDX41-218ENST00000625286 TWF1Q12792 350 aa12.09□□□□□ -0.47
DDX41-218ENST00000625286 PTGDRQ13258 359 aa12.09□□□□□ -0.47
DDX41-218ENST00000625286 ORC2Q13416 577 aaPredicted RBP12.09□□□□□ -0.47
DDX41-218ENST00000625286 SAFBQ15424 915 aaKnown RBP eCLIP12.09□□□□□ -0.47
DDX41-218ENST00000625286 CTXN3Q4LDR2 81 aa12.09□□□□□ -0.47
DDX41-218ENST00000625286 GPIHBP1Q8IV16 184 aa12.09□□□□□ -0.47
DDX41-218ENST00000625286 DDX12PQ92771 950 aa12.09□□□□□ -0.47
DDX41-218ENST00000625286 DNASE1L2Q92874 299 aa12.09□□□□□ -0.47
DDX41-218ENST00000625286 TBC1D32Q96NH3 1257 aa12.09□□□□□ -0.47
DDX41-218ENST00000625286 ACAP3Q96P50 834 aa12.09□□□□□ -0.47
DDX41-218ENST00000625286 LRRC3BQ96PB8 259 aa12.09□□□□□ -0.47
DDX41-218ENST00000625286 NTPCRQ9BSD7 190 aaKnown RBP12.09□□□□□ -0.47
DDX41-218ENST00000625286 TRMT61BQ9BVS5 477 aaKnown RBP12.09□□□□□ -0.47
DDX41-218ENST00000625286 MRPL4Q9BYD3 311 aaKnown RBP12.09□□□□□ -0.47
DDX41-218ENST00000625286 CHRDQ9H2X0 955 aa12.09□□□□□ -0.47
DDX41-218ENST00000625286 ZFP14Q9HCL3 533 aa12.09□□□□□ -0.47
DDX41-218ENST00000625286 C2orf42Q9NWW7 574 aa12.09□□□□□ -0.47
DDX41-218ENST00000625286 TUBGCP4Q9UGJ1 667 aa12.09□□□□□ -0.47
DDX41-218ENST00000625286 TIMM13Q9Y5L4 95 aaPredicted RBP12.09□□□□□ -0.47
DDX41-218ENST00000625286 OR4Q2P0C623 313 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 CHRNB1P11230 501 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 HARSP12081 509 aaKnown RBP12.08□□□□□ -0.48
DDX41-218ENST00000625286 U2AF2P26368 475 aaKnown RBP eCLIP12.08□□□□□ -0.48
DDX41-218ENST00000625286 GDI1P31150 447 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 ELF1P32519 619 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 RPL9P32969 192 aaKnown RBP12.08□□□□□ -0.48
DDX41-218ENST00000625286 TEAD2Q15562 447 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 ZBTB6Q15916 424 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 LPAL2Q16609 132 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 TPGS2Q68CL5 300 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 HAUS3Q68CZ6 603 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 MPZL3Q6UWV2 235 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 MAMSTRQ6ZN01 415 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 PDZD4Q76G19 769 aaPredicted RBP12.08□□□□□ -0.48
DDX41-218ENST00000625286 TMEM161BQ8NDZ6 487 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 BEST2Q8NFU1 509 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 SHKBP1Q8TBC3 707 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 SNX29Q8TEQ0 813 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 SMARCD2Q92925 531 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 BORCS6Q96GS4 357 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 CNTNAP3BQ96NU0 1288 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 PNMA5Q96PV4 448 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 KIF2CQ99661 725 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 CNTNAP3Q9BZ76 1288 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 DNAJC25Q9H1X3 360 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 BRD9Q9H8M2 597 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 LMAN1LQ9HAT1 526 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 TRPV4Q9HBA0 871 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 KMT5AQ9NQR1 393 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 TOPORSQ9NS56 1045 aaPredicted RBP12.08□□□□□ -0.48
DDX41-218ENST00000625286 SLC38A7Q9NVC3 462 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 NCDNQ9UBB6 729 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 AFF4Q9UHB7 1163 aaKnown RBP12.08□□□□□ -0.48
DDX41-218ENST00000625286 LIMCH1Q9UPQ0 1083 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 DNM3Q9UQ16 869 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 ZFHX4Q86UP3 3567 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 MYH11P35749 1972 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 ANK1P16157 1881 aa12.08□□□□□ -0.48
DDX41-218ENST00000625286 MAP1BP46821 2468 aaKnown RBP12.08□□□□□ -0.48
DDX41-218ENST00000625286 NPHP3-ACAD11A0A0J9YXS1 232 aa12.07□□□□□ -0.48
DDX41-218ENST00000625286 DCDC2BA2VCK2 349 aa12.07□□□□□ -0.48
DDX41-218ENST00000625286 H7C4K7 107 aa12.07□□□□□ -0.48
DDX41-218ENST00000625286 M0QZQ0 153 aa12.07□□□□□ -0.48
DDX41-218ENST00000625286 ZNF197O14709 1029 aa12.07□□□□□ -0.48
DDX41-218ENST00000625286 PPEF2O14830 753 aa12.07□□□□□ -0.48
DDX41-218ENST00000625286 OAZ2O95190 189 aa12.07□□□□□ -0.48
DDX41-218ENST00000625286 MYL4P12829 197 aa12.07□□□□□ -0.48
DDX41-218ENST00000625286 PSMC3P17980 439 aa12.07□□□□□ -0.48
DDX41-218ENST00000625286 TNFSF9P41273 254 aa12.07□□□□□ -0.48
DDX41-218ENST00000625286 SOX9P48436 509 aa12.07□□□□□ -0.48
DDX41-218ENST00000625286 TRAPPC10P48553 1259 aa12.07□□□□□ -0.48
DDX41-218ENST00000625286 GUCY2FP51841 1108 aa12.07□□□□□ -0.48
DDX41-218ENST00000625286 SATB1Q01826 763 aa12.07□□□□□ -0.48
DDX41-218ENST00000625286 RAD51AP2Q09MP3 1159 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms