RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 UBXN2AP68543 259 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 GRIK5Q16478 980 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 USH1GQ495M9 461 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 ERFEQ4G0M1 354 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 ST13P4Q8IZP2 240 aaPredicted RBP16.07■□□□□ 0.16
PMS1-221ENST00000624204 ERMNQ8TAM6 284 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 GRK7Q8WTQ7 553 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 CFAP57Q96MR6 1250 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 ZMYM2Q9UBW7 1377 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 HNRNPCL1O60812 293 aaKnown RBP16.07■□□□□ 0.16
PMS1-221ENST00000624204 IFNB1P01574 187 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 EEF2P13639 858 aaKnown RBP16.07■□□□□ 0.16
PMS1-221ENST00000624204 MUTP22033 750 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 ARFIP2P53365 341 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 PTK6Q13882 451 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 KIF22Q14807 665 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 PCNX4Q63HM2 1172 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 NEDD1Q8NHV4 660 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 CD101Q93033 1021 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 HERPUD2Q9BSE4 406 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 TRIM55Q9BYV6 548 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 SMG5Q9UPR3 1016 aaKnown RBP16.07■□□□□ 0.16
PMS1-221ENST00000624204 CHMP2BQ9UQN3 213 aa16.07■□□□□ 0.16
PMS1-221ENST00000624204 BANF1O75531 89 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 IMPDH2P12268 514 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 POLD1P28340 1107 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 CAV1Q03135 178 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 FASTKD3Q14CZ7 662 aaKnown RBP16.06■□□□□ 0.16
PMS1-221ENST00000624204 GSTA3Q16772 222 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 ARHGEF19Q8IW93 802 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 C12orf50Q8NA57 414 aaPredicted RBP16.06■□□□□ 0.16
PMS1-221ENST00000624204 NR1H4Q96RI1 486 aaPredicted RBP16.06■□□□□ 0.16
PMS1-221ENST00000624204 CLIC5Q9NZA1 410 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 ROBO3Q96MS0 1386 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 H3BRJ5 948 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 ATP6V1G1O75348 118 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 MAP7Q14244 749 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 DBN1Q16643 649 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 P3H1Q32P28 736 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 PABPC1LQ4VXU2 614 aaKnown RBP16.06■□□□□ 0.16
PMS1-221ENST00000624204 ZNF804AQ7Z570 1209 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 PLEKHG4BQ96PX9 1271 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 NDE1Q9NXR1 346 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 PPP1R11O60927 126 aaPredicted RBP16.06■□□□□ 0.16
PMS1-221ENST00000624204 HADHBP55084 474 aaKnown RBP16.06■□□□□ 0.16
PMS1-221ENST00000624204 INHBCP55103 352 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 NR1H3Q13133 447 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 SPATA24Q86W54 205 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 LRRC6Q86X45 466 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 ADGRF4Q8IZF3 695 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 AZIN2Q96A70 460 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 CLPTM1LQ96KA5 538 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 DNAJC1Q96KC8 554 aaKnown RBP16.06■□□□□ 0.16
PMS1-221ENST00000624204 ANAPC7Q9UJX3 599 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 FRMPD4Q14CM0 1322 aa16.06■□□□□ 0.16
PMS1-221ENST00000624204 FSCN2O14926 492 aa16.05■□□□□ 0.16
PMS1-221ENST00000624204 KITP10721 976 aa16.05■□□□□ 0.16
PMS1-221ENST00000624204 CDK7P50613 346 aa16.05■□□□□ 0.16
PMS1-221ENST00000624204 MARK2Q7KZI7 788 aaKnown RBP16.05■□□□□ 0.16
PMS1-221ENST00000624204 ANKMY2Q8IV38 441 aa16.05■□□□□ 0.16
PMS1-221ENST00000624204 COMMD3-BMI1R4GMX3 469 aa16.05■□□□□ 0.16
PMS1-221ENST00000624204 UMODL1Q5DID0 1318 aa16.05■□□□□ 0.16
PMS1-221ENST00000624204 B2RBV5 119 aa16.05■□□□□ 0.16
PMS1-221ENST00000624204 TISP43B9A030 160 aa16.05■□□□□ 0.16
PMS1-221ENST00000624204 CYP26A1O43174 497 aa16.05■□□□□ 0.16
PMS1-221ENST00000624204 SORBS3O60504 671 aa16.05■□□□□ 0.16
PMS1-221ENST00000624204 GYS1P13807 737 aa16.05■□□□□ 0.16
PMS1-221ENST00000624204 PLCB3Q01970 1234 aa16.05■□□□□ 0.16
PMS1-221ENST00000624204 C6orf163Q5TEZ5 329 aa16.05■□□□□ 0.16
PMS1-221ENST00000624204 PPM1KQ8N3J5 372 aa16.05■□□□□ 0.16
PMS1-221ENST00000624204 CCDC89Q8N998 374 aa16.05■□□□□ 0.16
PMS1-221ENST00000624204 PHF12Q96QT6 1004 aa16.05■□□□□ 0.16
PMS1-221ENST00000624204 ECSITQ9BQ95 431 aa16.05■□□□□ 0.16
PMS1-221ENST00000624204 SHCBP1LQ9BZQ2 653 aa16.05■□□□□ 0.16
PMS1-221ENST00000624204 DCLK3Q9C098 648 aa16.05■□□□□ 0.16
PMS1-221ENST00000624204 JMJD4Q9H9V9 463 aa16.05■□□□□ 0.16
PMS1-221ENST00000624204 hCG_1984214I3L0E3 225 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 PRPF4O43172 522 aaKnown RBP eCLIP16.04■□□□□ 0.162e-7■■■□□ 15.6
PMS1-221ENST00000624204 RNASEH1O60930 286 aaKnown RBP16.04■□□□□ 0.16
PMS1-221ENST00000624204 RXRBP28702 533 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 GCLMP48507 274 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 SMAD1Q15797 465 aaKnown RBP16.04■□□□□ 0.16
PMS1-221ENST00000624204 ARHGAP24Q8N264 748 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 ZNF713Q8N859 430 aaPredicted RBP16.04■□□□□ 0.16
PMS1-221ENST00000624204 DDX27Q96GQ7 796 aaKnown RBP16.04■□□□□ 0.16
PMS1-221ENST00000624204 MPP4Q96JB8 637 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 MAK16Q9BXY0 300 aaKnown RBP16.04■□□□□ 0.16
PMS1-221ENST00000624204 KANSL3Q9P2N6 904 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 RABGAP1Q9Y3P9 1069 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 NUP98P52948 1817 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 PNMA6FA0A0J9YX94 578 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 ENO1P06733 434 aaKnown RBP16.04■□□□□ 0.16
PMS1-221ENST00000624204 ANPEPP15144 967 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 MAPK4P31152 587 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 ZNF76P36508 570 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 NOP9Q86U38 636 aaKnown RBP16.04■□□□□ 0.16
PMS1-221ENST00000624204 TPH2Q8IWU9 490 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 PTCD3Q96EY7 689 aaKnown RBP16.04■□□□□ 0.16
PMS1-221ENST00000624204 OLFM3Q96PB7 478 aa16.04■□□□□ 0.16
PMS1-221ENST00000624204 TMEM120AQ9BXJ8 343 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms