RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 LRRC4CQ9HCJ2 640 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 MRPL47Q9HD33 250 aaKnown RBP8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 ADAM22Q9P0K1 906 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 PPME1Q9Y570 386 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 NUB1Q9Y5A7 615 aa8.87□□□□□ -0.99
SND1-IT1-201ENST00000623342 A0A0G2JMZ2 1700 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 CAND2O75155 1236 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 FAM107AO95990 144 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 CFHP08603 1231 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 HARSP12081 509 aaKnown RBP8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 RARGP13631 454 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 TCF7P36402 384 aaPredicted RBP8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 CDR1P51861 262 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 EFNA5P52803 228 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 CALCOCO2Q13137 446 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 NCOA4Q13772 614 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 C2CD6Q53TS8 623 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 LLGL2Q6P1M3 1020 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 METTL7BQ6UX53 244 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 SYDE1Q6ZW31 735 aaPredicted RBP8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 PASD1Q8IV76 773 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 PRPF31Q8WWY3 499 aaKnown RBP8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 SEPT1Q8WYJ6 367 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 PGM2Q96G03 612 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 DDX27Q96GQ7 796 aaKnown RBP8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 FAM167AQ96KS9 214 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 PAGR1Q9BTK6 254 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 IMPG2Q9BZV3 1241 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 SPATC1LQ9H0A9 340 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 SEMA4AQ9H3S1 761 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 CNOT10Q9H9A5 744 aaKnown RBP8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 PPANQ9NQ55 473 aaKnown RBP8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 WHRNQ9P202 907 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 SCINQ9Y6U3 715 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 LAMA2P24043 3122 aaKnown RBP8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 ATXN2Q99700 1313 aaKnown RBP8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 GMNCA6NCL1 334 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 THAP12O43422 761 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 PSTPIP1O43586 416 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 PAEPP09466 180 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 TMOD1P28289 359 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 KRT17Q04695 432 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 C1QBPQ07021 282 aaKnown RBP8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 ADCY2Q08462 1091 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 GRM1Q13255 1194 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 MAMLD1Q13495 774 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 SNX1Q13596 522 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 LLGL1Q15334 1064 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 SEZ6Q53EL9 994 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 C6orf118Q5T5N4 469 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 IER5Q5VY09 327 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 PLEKHA7Q6IQ23 1121 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 WDR49Q8IV35 697 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 BRSK2Q8IWQ3 736 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 RHOT1Q8IXI2 618 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 C3orf20Q8ND61 904 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 GRK7Q8WTQ7 553 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 TMEM109Q9BVC6 243 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 MRPL4Q9BYD3 311 aaKnown RBP8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 FHDC1Q9C0D6 1143 aaPredicted RBP8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 AZI2Q9H6S1 392 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 CHST7Q9NS84 486 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 CSADQ9Y600 493 aa8.86□□□□□ -0.99
SND1-IT1-201ENST00000623342 UMODL1Q5DID0 1318 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 PTPRFP10586 1907 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 A0A087WUV0 522 aaPredicted RBP8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 RIPK2O43353 540 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 TRAPPC3O43617 180 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 MSCO60682 206 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 TOM1L1O75674 476 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 DDNO94850 711 aaPredicted RBP8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 ITIH2P19823 946 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 FGFR4P22455 802 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 DRP2Q13474 957 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 GADL1Q6ZQY3 521 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 MMS22LQ6ZRQ5 1243 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 MICALCLQ6ZW33 695 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 TCP11Q8WWU5 503 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 BBXQ8WY36 941 aaPredicted RBP8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 PPM1EQ8WY54 764 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 TCHPQ9BT92 498 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 DCLK3Q9C098 648 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 CCDC113Q9H0I3 377 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 HOMER3Q9NSC5 361 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 TLDC2A0PJX2 215 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 RGS16O15492 202 aaPredicted RBP8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 FAM189A1O60320 539 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 GAS8O95995 478 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 ASS1P00966 412 aaKnown RBP8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 SSTR3P32745 418 aaPredicted RBP8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 TNFSF9P41273 254 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 ZNF132P52740 706 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 IRX3P78415 501 aaPredicted RBP8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 PTK6Q13882 451 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 LY6KQ17RY6 165 aa8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 CDCA2Q69YH5 1023 aaPredicted RBP8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 TRMT10CQ7L0Y3 403 aaKnown RBP8.85□□□□□ -0.99
SND1-IT1-201ENST00000623342 EEPD1Q7L9B9 569 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms