RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 ZSWIM1Q9BR11 485 aa17.02■□□□□ 0.32
GABRB3-215ENST00000622697 MRPL46Q9H2W6 279 aaKnown RBP17.02■□□□□ 0.32
GABRB3-215ENST00000622697 KIF9Q9HAQ2 790 aa17.02■□□□□ 0.32
GABRB3-215ENST00000622697 TAP1Q03518 808 aa17.02■□□□□ 0.32
GABRB3-215ENST00000622697 NSUN2Q08J23 767 aaKnown RBP eCLIP17.02■□□□□ 0.32
GABRB3-215ENST00000622697 SLC10A5Q5PT55 438 aa17.02■□□□□ 0.32
GABRB3-215ENST00000622697 C3orf62Q6ZUJ4 267 aa17.02■□□□□ 0.32
GABRB3-215ENST00000622697 SYDE1Q6ZW31 735 aaPredicted RBP17.02■□□□□ 0.32
GABRB3-215ENST00000622697 APOBEC3FQ8IUX4 373 aaKnown RBP17.02■□□□□ 0.32
GABRB3-215ENST00000622697 CDKL3Q8IVW4 592 aaPredicted RBP17.02■□□□□ 0.32
GABRB3-215ENST00000622697 ZNF280CQ8ND82 737 aa17.02■□□□□ 0.32
GABRB3-215ENST00000622697 ACAP3Q96P50 834 aa17.02■□□□□ 0.32
GABRB3-215ENST00000622697 RAPGEF5Q92565 580 aa17.02■□□□□ 0.31
GABRB3-215ENST00000622697 VPS39Q96JC1 886 aa17.02■□□□□ 0.31
GABRB3-215ENST00000622697 EFHD1Q9BUP0 239 aa17.02■□□□□ 0.31
GABRB3-215ENST00000622697 RIOX1Q9H6W3 641 aa17.02■□□□□ 0.31
GABRB3-215ENST00000622697 FAM49BQ9NUQ9 324 aa17.02■□□□□ 0.31
GABRB3-215ENST00000622697 LRFN2Q9ULH4 789 aa17.02■□□□□ 0.31
GABRB3-215ENST00000622697 FAM47DPA6NHR8 397 aa17.02■□□□□ 0.31
GABRB3-215ENST00000622697 CST8O60676 142 aa17.02■□□□□ 0.31
GABRB3-215ENST00000622697 MAPK7Q13164 816 aa17.02■□□□□ 0.31
GABRB3-215ENST00000622697 KIAA1841Q6NSI8 718 aa17.02■□□□□ 0.31
GABRB3-215ENST00000622697 INTS13Q9NVM9 706 aa17.02■□□□□ 0.31
GABRB3-215ENST00000622697 AP3M2P53677 418 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 TMTC4Q5T4D3 741 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 GRAMD1AQ96CP6 724 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 PGBD4Q96DM1 585 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 CARD9Q9H257 536 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 ITGA4P13612 1032 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 EEF1B2P24534 225 aaKnown RBP17.01■□□□□ 0.31
GABRB3-215ENST00000622697 HSP90AA5PQ58FG0 334 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 LRRC34Q8IZ02 419 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 SLC26A7Q8TE54 656 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 PDCD6IPQ8WUM4 868 aaKnown RBP17.01■□□□□ 0.31
GABRB3-215ENST00000622697 STAP1Q9ULZ2 295 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 SHPRHQ149N8 1683 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 SLC26A4O43511 780 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 CORO7P57737 925 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 EFHC2Q5JST6 749 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 SAMD7Q7Z3H4 446 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 C1orf131Q8NDD1 294 aaKnown RBP17.01■□□□□ 0.31
GABRB3-215ENST00000622697 CDC26Q8NHZ8 85 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 CLMNQ96JQ2 1002 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 TSR3Q9UJK0 312 aaKnown RBP17.01■□□□□ 0.31
GABRB3-215ENST00000622697 FDX1P10109 184 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 CDK17Q00537 523 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 SGSM1Q2NKQ1 1148 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 GLIS3Q8NEA6 775 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 KPNA7A9QM74 516 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 CAND2O75155 1236 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 SOX10P56693 466 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 MEI1Q5TIA1 1274 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 KCNK18Q7Z418 384 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 LONP2Q86WA8 852 aa17.01■□□□□ 0.31
GABRB3-215ENST00000622697 MAP3K6O95382 1288 aa17■□□□□ 0.31
GABRB3-215ENST00000622697 GYS1P13807 737 aa17■□□□□ 0.31
GABRB3-215ENST00000622697 CACNB2Q08289 660 aaPredicted RBP17■□□□□ 0.31
GABRB3-215ENST00000622697 TSC22D3Q99576 134 aa17■□□□□ 0.31
GABRB3-215ENST00000622697 TSSK1BQ9BXA7 367 aa17■□□□□ 0.31
GABRB3-215ENST00000622697 ZNF446Q9NWS9 450 aa17■□□□□ 0.31
GABRB3-215ENST00000622697 BFARQ9NZS9 450 aa17■□□□□ 0.31
GABRB3-215ENST00000622697 ZC3H7BQ9UGR2 993 aaKnown RBP17■□□□□ 0.31
GABRB3-215ENST00000622697 ATP8B3O60423 1300 aa17■□□□□ 0.31
GABRB3-215ENST00000622697 SREBF1P36956 1147 aa17■□□□□ 0.31
GABRB3-215ENST00000622697 TKFCQ3LXA3 575 aa17■□□□□ 0.31
GABRB3-215ENST00000622697 FSCBQ5H9T9 825 aa17■□□□□ 0.31
GABRB3-215ENST00000622697 ACAD10Q6JQN1 1059 aa17■□□□□ 0.31
GABRB3-215ENST00000622697 SPATA18Q8TC71 538 aa17■□□□□ 0.31
GABRB3-215ENST00000622697 DHX38Q92620 1227 aaKnown RBP17■□□□□ 0.31
GABRB3-215ENST00000622697 GSTA4O15217 222 aa17■□□□□ 0.31
GABRB3-215ENST00000622697 ANGEL2Q5VTE6 544 aaKnown RBP17■□□□□ 0.31
GABRB3-215ENST00000622697 KDM7AQ6ZMT4 941 aa17■□□□□ 0.31
GABRB3-215ENST00000622697 ACAD11Q709F0 780 aa17■□□□□ 0.31
GABRB3-215ENST00000622697 SLC47A2Q86VL8 602 aa17■□□□□ 0.31
GABRB3-215ENST00000622697 PSMC3IPQ9P2W1 217 aaPredicted RBP17■□□□□ 0.31
GABRB3-215ENST00000622697 EXTL3O43909 919 aa17■□□□□ 0.31
GABRB3-215ENST00000622697 FBXO25Q8TCJ0 367 aa17■□□□□ 0.31
GABRB3-215ENST00000622697 FGD4Q96M96 766 aa17■□□□□ 0.31
GABRB3-215ENST00000622697 ZFATQ9P243 1243 aa17■□□□□ 0.31
GABRB3-215ENST00000622697 NEURL4Q96JN8 1562 aa17■□□□□ 0.31
GABRB3-215ENST00000622697 F8VZ95 297 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 KRT10P13645 584 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 PRLRP16471 622 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 PGM1P36871 562 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 DNAJC3Q13217 504 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 FAM71DQ8N9W8 422 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 MYCBPAPQ8TBZ2 947 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 SEPT1Q8WYJ6 367 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 ALKBH8Q96BT7 664 aaKnown RBP16.99■□□□□ 0.31
GABRB3-215ENST00000622697 SUDS3Q9H7L9 328 aaPredicted RBP16.99■□□□□ 0.31
GABRB3-215ENST00000622697 PCMTD2Q9NV79 361 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 GOLGA8CPA6NN73 597 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 DFFAO00273 331 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 FAM153BP0C7A2 387 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 TAC1P20366 129 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 PIGHQ14442 188 aaPredicted RBP16.99■□□□□ 0.31
GABRB3-215ENST00000622697 FAM153CQ494X1 144 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 LVRNQ6Q4G3 990 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 FEZF2Q8TBJ5 459 aa16.99■□□□□ 0.31
GABRB3-215ENST00000622697 GCOM2Q9BZD3 368 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms