RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 BEST2Q8NFU1 509 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 ARNTL2Q8WYA1 636 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 ZNF558Q96NG5 402 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 SLC28A3Q9HAS3 691 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 SLC38A7Q9NVC3 462 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 FAN1Q9Y2M0 1017 aa14.73□□□□□ -0.05
NEK3-210ENST00000620675 PIRO00625 290 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 B3GAT3O94766 335 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 ALDH2P05091 517 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 KRT19P08727 400 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 CYP3A5P20815 502 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 DNAJB1P25685 340 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 ALDH7A1P49419 539 aaKnown RBP14.72□□□□□ -0.05
NEK3-210ENST00000620675 HSP90AA2PQ14568 343 aaPredicted RBP14.72□□□□□ -0.05
NEK3-210ENST00000620675 KRT31Q15323 416 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 SURF1Q15526 300 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 ZACNQ401N2 412 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 MIIPQ5JXC2 388 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 FAM200AQ8TCP9 573 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 TAS1R2Q8TE23 839 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 SEMA4DQ92854 862 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 ANKRD36BP1Q96IX9 119 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 GPR62Q9BZJ7 368 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 TAB2Q9NYJ8 693 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 AGAP1Q9UPQ3 857 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 LAG3P18627 525 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 MTIF2P46199 727 aaKnown RBP14.72□□□□□ -0.05
NEK3-210ENST00000620675 ERVK-21P61565 698 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 KCNH2Q12809 1159 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 BIRC3Q13489 604 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 APTXQ7Z2E3 356 aaKnown RBP14.72□□□□□ -0.05
NEK3-210ENST00000620675 GDPD5Q8WTR4 605 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 IGSF21Q96ID5 467 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 FAM161BQ96MY7 647 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 TGS1Q96RS0 853 aaKnown RBP14.72□□□□□ -0.05
NEK3-210ENST00000620675 TMEM175Q9BSA9 504 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 PI4K2AQ9BTU6 479 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 METTL14Q9HCE5 456 aaKnown RBP14.72□□□□□ -0.05
NEK3-210ENST00000620675 PCDHGC5Q9Y5F6 944 aa14.72□□□□□ -0.05
NEK3-210ENST00000620675 FGF18O76093 207 aa14.71□□□□□ -0.05
NEK3-210ENST00000620675 FGFR1OPO95684 399 aaKnown RBP14.71□□□□□ -0.05
NEK3-210ENST00000620675 GNA14O95837 355 aa14.71□□□□□ -0.05
NEK3-210ENST00000620675 TNNC2P02585 160 aa14.71□□□□□ -0.05
NEK3-210ENST00000620675 MYL6P60660 151 aa14.71□□□□□ -0.05
NEK3-210ENST00000620675 PTPN21Q16825 1174 aa14.71□□□□□ -0.05
NEK3-210ENST00000620675 HABP4Q5JVS0 413 aaKnown RBP14.71□□□□□ -0.05
NEK3-210ENST00000620675 SPOPLQ6IQ16 392 aa14.71□□□□□ -0.05
NEK3-210ENST00000620675 NT5DC4Q86YG4 428 aa14.71□□□□□ -0.05
NEK3-210ENST00000620675 TUBGCP2Q9BSJ2 902 aa14.71□□□□□ -0.05
NEK3-210ENST00000620675 RBSNQ9H1K0 784 aa14.71□□□□□ -0.05
NEK3-210ENST00000620675 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.71□□□□□ -0.05
NEK3-210ENST00000620675 BECN2A8MW95 431 aa14.7□□□□□ -0.06
NEK3-210ENST00000620675 GRM6O15303 877 aa14.7□□□□□ -0.06
NEK3-210ENST00000620675 HLA-DRAP01903 254 aa14.7□□□□□ -0.06
NEK3-210ENST00000620675 FMO5P49326 533 aa14.7□□□□□ -0.06
NEK3-210ENST00000620675 LILRA4P59901 499 aa14.7□□□□□ -0.06
NEK3-210ENST00000620675 CAMK1Q14012 370 aa14.7□□□□□ -0.06
NEK3-210ENST00000620675 TIGD5Q53EQ6 642 aa14.7□□□□□ -0.06
NEK3-210ENST00000620675 CACTINQ8WUQ7 758 aaKnown RBP14.7□□□□□ -0.06
NEK3-210ENST00000620675 XYLT2Q9H1B5 865 aa14.7□□□□□ -0.06
NEK3-210ENST00000620675 VPS16Q9H269 839 aa14.7□□□□□ -0.06
NEK3-210ENST00000620675 ZNF576Q9H609 170 aa14.7□□□□□ -0.06
NEK3-210ENST00000620675 TMEM8AQ9HCN3 771 aa14.7□□□□□ -0.06
NEK3-210ENST00000620675 SPG21Q9NZD8 308 aa14.7□□□□□ -0.06
NEK3-210ENST00000620675 ADAM28Q9UKQ2 775 aa14.7□□□□□ -0.06
NEK3-210ENST00000620675 EFEMP2O95967 443 aa14.7□□□□□ -0.06
NEK3-210ENST00000620675 PRKCSHP14314 528 aaPredicted RBP14.7□□□□□ -0.06
NEK3-210ENST00000620675 MXI1P50539 228 aa14.7□□□□□ -0.06
NEK3-210ENST00000620675 APBA1Q02410 837 aa14.7□□□□□ -0.06
NEK3-210ENST00000620675 NCOA4Q13772 614 aa14.7□□□□□ -0.06
NEK3-210ENST00000620675 Q7L0L9 218 aa14.7□□□□□ -0.06
NEK3-210ENST00000620675 RSPH1Q8WYR4 309 aa14.7□□□□□ -0.06
NEK3-210ENST00000620675 CRACR2AQ9BSW2 395 aa14.7□□□□□ -0.06
NEK3-210ENST00000620675 ITGA11Q9UKX5 1188 aa14.7□□□□□ -0.06
NEK3-210ENST00000620675 PCDHB12Q9Y5F1 795 aa14.7□□□□□ -0.06
NEK3-210ENST00000620675 SMTNL1A8MU46 457 aa14.69□□□□□ -0.06
NEK3-210ENST00000620675 C5orf67F2Z3F1 127 aa14.69□□□□□ -0.06
NEK3-210ENST00000620675 XPOTO43592 962 aaKnown RBP14.69□□□□□ -0.06
NEK3-210ENST00000620675 PHACTR2O75167 634 aa14.69□□□□□ -0.06
NEK3-210ENST00000620675 TADA2AO75478 443 aa14.69□□□□□ -0.06
NEK3-210ENST00000620675 RPL9P32969 192 aaKnown RBP14.69□□□□□ -0.06
NEK3-210ENST00000620675 KRT39Q6A163 491 aa14.69□□□□□ -0.06
NEK3-210ENST00000620675 FUT10Q6P4F1 479 aa14.69□□□□□ -0.06
NEK3-210ENST00000620675 DCLRE1AQ6PJP8 1040 aa14.69□□□□□ -0.06
NEK3-210ENST00000620675 FBXO22Q8NEZ5 403 aa14.69□□□□□ -0.06
NEK3-210ENST00000620675 SPPL3Q8TCT6 385 aa14.69□□□□□ -0.06
NEK3-210ENST00000620675 AUTS2Q8WXX7 1259 aa14.69□□□□□ -0.06
NEK3-210ENST00000620675 TSPAN18Q96SJ8 248 aa14.69□□□□□ -0.06
NEK3-210ENST00000620675 APOBEC3GQ9HC16 384 aaKnown RBP14.69□□□□□ -0.06
NEK3-210ENST00000620675 MAGEC2Q9UBF1 373 aaPredicted RBP14.69□□□□□ -0.06
NEK3-210ENST00000620675 TIMM13Q9Y5L4 95 aaPredicted RBP14.69□□□□□ -0.06
NEK3-210ENST00000620675 LPXNO60711 386 aa14.69□□□□□ -0.06
NEK3-210ENST00000620675 AFPP02771 609 aaKnown RBP14.69□□□□□ -0.06
NEK3-210ENST00000620675 EEF1GP26641 437 aaKnown RBP14.69□□□□□ -0.06
NEK3-210ENST00000620675 RBP5P82980 135 aa14.69□□□□□ -0.06
NEK3-210ENST00000620675 GRIN2CQ14957 1233 aa14.69□□□□□ -0.06
NEK3-210ENST00000620675 FAM114A1Q8IWE2 563 aa14.69□□□□□ -0.06
NEK3-210ENST00000620675 DDX27Q96GQ7 796 aaKnown RBP14.69□□□□□ -0.06
NEK3-210ENST00000620675 TMEM169Q96HH4 297 aa14.69□□□□□ -0.06
NEK3-210ENST00000620675 HPDLQ96IR7 371 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 164.3 ms