RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 AFF4Q9UHB7 1163 aaKnown RBP12.99□□□□□ -0.33
UPF3B-204ENST00000619445 PCDHB8Q9UN66 801 aa12.99□□□□□ -0.33
UPF3B-204ENST00000619445 NOTCH4Q99466 2003 aa12.99□□□□□ -0.33
UPF3B-204ENST00000619445 ZNF292O60281 2723 aa12.99□□□□□ -0.33
UPF3B-204ENST00000619445 WDR87Q6ZQQ6 2873 aa12.98□□□□□ -0.33
UPF3B-204ENST00000619445 KANSL1LA0AUZ9 987 aa12.98□□□□□ -0.33
UPF3B-204ENST00000619445 WDR27A2RRH5 827 aa12.98□□□□□ -0.33
UPF3B-204ENST00000619445 HNRNPDLO14979 420 aaKnown RBP12.98□□□□□ -0.33
UPF3B-204ENST00000619445 NCAM2O15394 837 aa12.98□□□□□ -0.33
UPF3B-204ENST00000619445 FAM13AO94988 1023 aa12.98□□□□□ -0.33
UPF3B-204ENST00000619445 PIGRP01833 764 aa12.98□□□□□ -0.33
UPF3B-204ENST00000619445 LRPAP1P30533 357 aa12.98□□□□□ -0.33
UPF3B-204ENST00000619445 GPC5P78333 572 aa12.98□□□□□ -0.33
UPF3B-204ENST00000619445 NTHL1P78549 312 aa12.98□□□□□ -0.33
UPF3B-204ENST00000619445 FOXK2Q01167 660 aa12.98□□□□□ -0.33
UPF3B-204ENST00000619445 RAD51AP2Q09MP3 1159 aa12.98□□□□□ -0.33
UPF3B-204ENST00000619445 PLD1Q13393 1074 aa12.98□□□□□ -0.33
UPF3B-204ENST00000619445 MLF2Q15773 248 aaPredicted RBP12.98□□□□□ -0.33
UPF3B-204ENST00000619445 CYP4A22Q5TCH4 519 aa12.98□□□□□ -0.33
UPF3B-204ENST00000619445 FRMD5Q7Z6J6 570 aa12.98□□□□□ -0.33
UPF3B-204ENST00000619445 ITFG1Q8TB96 612 aa12.98□□□□□ -0.33
UPF3B-204ENST00000619445 TBC1D32Q96NH3 1257 aa12.98□□□□□ -0.33
UPF3B-204ENST00000619445 BCO2Q9BYV7 579 aa12.98□□□□□ -0.33
UPF3B-204ENST00000619445 CYP4F11Q9HBI6 524 aa12.98□□□□□ -0.33
UPF3B-204ENST00000619445 FBXL5Q9UKA1 691 aa12.98□□□□□ -0.33
UPF3B-204ENST00000619445 MRPS17Q9Y2R5 130 aaKnown RBP12.98□□□□□ -0.33
UPF3B-204ENST00000619445 CACNA1IQ9P0X4 2223 aa12.98□□□□□ -0.33
UPF3B-204ENST00000619445 F5P12259 2224 aa12.98□□□□□ -0.33
UPF3B-204ENST00000619445 TTC26A0AVF1 554 aa12.97□□□□□ -0.33
UPF3B-204ENST00000619445 I3L4J1 428 aa12.97□□□□□ -0.33
UPF3B-204ENST00000619445 M0QZQ0 153 aa12.97□□□□□ -0.33
UPF3B-204ENST00000619445 OGTO15294 1046 aa12.97□□□□□ -0.33
UPF3B-204ENST00000619445 TBCAO75347 108 aaKnown RBP12.97□□□□□ -0.33
UPF3B-204ENST00000619445 KRT18P05783 430 aaKnown RBP12.97□□□□□ -0.33
UPF3B-204ENST00000619445 ZNF131P52739 623 aa12.97□□□□□ -0.33
UPF3B-204ENST00000619445 POU5F1Q01860 360 aaKnown RBP12.97□□□□□ -0.33
UPF3B-204ENST00000619445 YWHAHQ04917 246 aaPredicted RBP12.97□□□□□ -0.33
UPF3B-204ENST00000619445 SLC44A4Q53GD3 710 aa12.97□□□□□ -0.33
UPF3B-204ENST00000619445 PDZD4Q76G19 769 aaPredicted RBP12.97□□□□□ -0.33
UPF3B-204ENST00000619445 ASCL5Q7RTU5 278 aa12.97□□□□□ -0.33
UPF3B-204ENST00000619445 USP37Q86T82 979 aa12.97□□□□□ -0.33
UPF3B-204ENST00000619445 GPBP1Q86WP2 473 aa12.97□□□□□ -0.33
UPF3B-204ENST00000619445 DDX12PQ92771 950 aa12.97□□□□□ -0.33
UPF3B-204ENST00000619445 DNASE1L2Q92874 299 aa12.97□□□□□ -0.33
UPF3B-204ENST00000619445 C18orf25Q96B23 403 aaPredicted RBP12.97□□□□□ -0.33
UPF3B-204ENST00000619445 ELSPBP1Q96BH3 223 aa12.97□□□□□ -0.33
UPF3B-204ENST00000619445 KIF12Q96FN5 646 aa12.97□□□□□ -0.33
UPF3B-204ENST00000619445 ZBTB45Q96K62 511 aaPredicted RBP12.97□□□□□ -0.33
UPF3B-204ENST00000619445 ZNF512Q96ME7 567 aaPredicted RBP12.97□□□□□ -0.33
UPF3B-204ENST00000619445 DDX23Q9BUQ8 820 aaKnown RBP12.97□□□□□ -0.33
UPF3B-204ENST00000619445 GPR88Q9GZN0 384 aa12.97□□□□□ -0.33
UPF3B-204ENST00000619445 RPF1Q9H9Y2 349 aaKnown RBP12.97□□□□□ -0.33
UPF3B-204ENST00000619445 TBX20Q9UMR3 447 aa12.97□□□□□ -0.33
UPF3B-204ENST00000619445 INSL5Q9Y5Q6 135 aa12.97□□□□□ -0.33
UPF3B-204ENST00000619445 CFAP54Q96N23 3096 aa12.97□□□□□ -0.33
UPF3B-204ENST00000619445 OR6C75A6NL08 312 aa12.96□□□□□ -0.33
UPF3B-204ENST00000619445 K7ENM7 598 aa12.96□□□□□ -0.33
UPF3B-204ENST00000619445 OAZ2O95190 189 aa12.96□□□□□ -0.33
UPF3B-204ENST00000619445 CXCL8P10145 99 aa12.96□□□□□ -0.33
UPF3B-204ENST00000619445 CPB1P15086 417 aa12.96□□□□□ -0.33
UPF3B-204ENST00000619445 ARPP19P56211 112 aa12.96□□□□□ -0.33
UPF3B-204ENST00000619445 ARSHQ5FYA8 562 aa12.96□□□□□ -0.33
UPF3B-204ENST00000619445 SLFN12LQ6IEE8 588 aa12.96□□□□□ -0.33
UPF3B-204ENST00000619445 C1orf210Q8IVY1 113 aa12.96□□□□□ -0.33
UPF3B-204ENST00000619445 MYCT1Q8N699 235 aa12.96□□□□□ -0.33
UPF3B-204ENST00000619445 BEST2Q8NFU1 509 aa12.96□□□□□ -0.33
UPF3B-204ENST00000619445 E2F7Q96AV8 911 aa12.96□□□□□ -0.33
UPF3B-204ENST00000619445 PLIN2Q99541 437 aa12.96□□□□□ -0.33
UPF3B-204ENST00000619445 CORO1BQ9BR76 489 aa12.96□□□□□ -0.33
UPF3B-204ENST00000619445 REEP2Q9BRK0 252 aa12.96□□□□□ -0.33
UPF3B-204ENST00000619445 ZFP14Q9HCL3 533 aa12.96□□□□□ -0.33
UPF3B-204ENST00000619445 HCFC1R1Q9NWW0 138 aa12.96□□□□□ -0.33
UPF3B-204ENST00000619445 DLGAP2Q9P1A6 1054 aa12.96□□□□□ -0.33
UPF3B-204ENST00000619445 DERAQ9Y315 318 aa12.96□□□□□ -0.33
UPF3B-204ENST00000619445 FANCMQ8IYD8 2048 aa12.96□□□□□ -0.33
UPF3B-204ENST00000619445 MAN2B1O00754 1011 aa12.95□□□□□ -0.34
UPF3B-204ENST00000619445 TRAK2O60296 914 aa12.95□□□□□ -0.34
UPF3B-204ENST00000619445 LMNAP02545 664 aaKnown RBP12.95□□□□□ -0.34
UPF3B-204ENST00000619445 ADRB2P07550 413 aa12.95□□□□□ -0.34
UPF3B-204ENST00000619445 TYMPP19971 482 aa12.95□□□□□ -0.34
UPF3B-204ENST00000619445 TXLNAP40222 546 aa12.95□□□□□ -0.34
UPF3B-204ENST00000619445 AARSP49588 968 aaKnown RBP eCLIP12.95□□□□□ -0.34
UPF3B-204ENST00000619445 ADCY1Q08828 1119 aa12.95□□□□□ -0.34
UPF3B-204ENST00000619445 ZBTB6Q15916 424 aa12.95□□□□□ -0.34
UPF3B-204ENST00000619445 ZNF528Q3MIS6 628 aa12.95□□□□□ -0.34
UPF3B-204ENST00000619445 ZNF852Q6ZMS4 543 aa12.95□□□□□ -0.34
UPF3B-204ENST00000619445 KRI1Q8N9T8 703 aaKnown RBP12.95□□□□□ -0.34
UPF3B-204ENST00000619445 LARP4BQ92615 738 aaKnown RBP12.95□□□□□ -0.34
UPF3B-204ENST00000619445 RAD54LQ92698 747 aa12.95□□□□□ -0.34
UPF3B-204ENST00000619445 HVCN1Q96D96 273 aa12.95□□□□□ -0.34
UPF3B-204ENST00000619445 IER2Q9BTL4 223 aa12.95□□□□□ -0.34
UPF3B-204ENST00000619445 RPP25Q9BUL9 199 aaKnown RBP12.95□□□□□ -0.34
UPF3B-204ENST00000619445 CCSER1Q9C0I3 900 aa12.95□□□□□ -0.34
UPF3B-204ENST00000619445 ST6GALNAC4Q9H4F1 302 aa12.95□□□□□ -0.34
UPF3B-204ENST00000619445 ASAH2Q9NR71 780 aa12.95□□□□□ -0.34
UPF3B-204ENST00000619445 HSFX1Q9UBD0 423 aa12.95□□□□□ -0.34
UPF3B-204ENST00000619445 CCDC39Q9UFE4 941 aa12.95□□□□□ -0.34
UPF3B-204ENST00000619445 FBXO4Q9UKT5 387 aa12.95□□□□□ -0.34
UPF3B-204ENST00000619445 ASB3Q9Y575 518 aa12.95□□□□□ -0.34
UPF3B-204ENST00000619445 VPS13AQ96RL7 3174 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms