RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ALADP13716 330 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 KCNE1P15382 129 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 RPL9P32969 192 aaKnown RBP5.69□□□□□ -1.5
SHMT1-211ENST00000618902 CASP4P49662 377 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 CYP2J2P51589 502 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 YARSP54577 528 aaKnown RBP5.69□□□□□ -1.5
SHMT1-211ENST00000618902 BCAR1P56945 870 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 GRIK3Q13003 919 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 PSMD2Q13200 908 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 ADAM15Q13444 863 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 IQCB1Q15051 598 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 SKIV2LQ15477 1246 aaKnown RBP5.69□□□□□ -1.5
SHMT1-211ENST00000618902 ZBTB6Q15916 424 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 KNOP1Q1ED39 458 aaKnown RBP5.69□□□□□ -1.5
SHMT1-211ENST00000618902 ANO6Q4KMQ2 910 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 C1orf220Q5T0J3 134 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 SLFN12LQ6IEE8 588 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 C15orf39Q6ZRI6 1047 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 STXBP4Q6ZWJ1 553 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 CCDC186Q7Z3E2 898 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 NT5DC4Q86YG4 428 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 CBWD2Q8IUF1 395 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 LRRC8AQ8IWT6 810 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 EFCAB13Q8IY85 973 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 COLGALT2Q8IYK4 626 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 SYCP3Q8IZU3 236 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 ADSSL1Q8N142 457 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 SLC39A11Q8N1S5 342 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 GUF1Q8N442 669 aaKnown RBP5.69□□□□□ -1.5
SHMT1-211ENST00000618902 CCDC150Q8NCX0 1101 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 C3orf58Q8NDZ4 430 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 GDPD5Q8WTR4 605 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 CASP10Q92851 521 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 SMARCE1Q969G3 411 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 IGSF21Q96ID5 467 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 FBXL18Q96ME1 805 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 ACAP3Q96P50 834 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 DUSP9Q99956 384 aaKnown RBP5.69□□□□□ -1.5
SHMT1-211ENST00000618902 TCHPQ9BT92 498 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 C1QTNF1Q9BXJ1 281 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 GBP3Q9H0R5 595 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 PLEKHA4Q9H4M7 779 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 GOLGA2P5Q9HBQ8 144 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 HSPBP1Q9NZL4 362 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 CNTN3Q9P232 1028 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 KIAA1468Q9P260 1216 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 FNIP2Q9P278 1114 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 CGNQ9P2M7 1197 aaKnown RBP5.69□□□□□ -1.5
SHMT1-211ENST00000618902 TUBGCP4Q9UGJ1 667 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 DACH1Q9UI36 760 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 AGO2Q9UKV8 859 aaKnown RBP5.69□□□□□ -1.5
SHMT1-211ENST00000618902 FAN1Q9Y2M0 1017 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 DMDP11532 3685 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 ATG2AQ2TAZ0 1938 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 UBE4BO95155 1302 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 PTPRJQ12913 1337 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 ZDBF2Q9HCK1 2354 aa5.69□□□□□ -1.5
SHMT1-211ENST00000618902 PDCD11Q14690 1871 aaKnown RBP5.68□□□□□ -1.5
SHMT1-211ENST00000618902 TRIM49BA6NDI0 452 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 GRXCR2A6NFK2 248 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 CASTOR2A6NHX0 329 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 DLL1O00548 723 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 NRP1O14786 923 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 EXTL3O43909 919 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 ZC3H11AO75152 810 aaKnown RBP eCLIP5.68□□□□□ -1.5
SHMT1-211ENST00000618902 SMC2O95347 1197 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 SOD2P04179 222 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 THP07101 528 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 ADH1AP07327 375 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 NFICP08651 508 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 POU2F2P09086 479 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 CYP3A5P20815 502 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 GARTP22102 1010 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 IRS1P35568 1242 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 MATR3P43243 847 aaKnown RBP eCLIP5.68□□□□□ -1.5
SHMT1-211ENST00000618902 NLRP12P59046 1061 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 TUSC3Q13454 348 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 SMAD4Q13485 552 aaKnown RBP5.68□□□□□ -1.5
SHMT1-211ENST00000618902 TUBB2AQ13885 445 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 KCNC3Q14003 757 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 PTPN14Q15678 1187 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 SMAD2Q15796 467 aaKnown RBP5.68□□□□□ -1.5
SHMT1-211ENST00000618902 DUSP6Q16828 381 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 USP41Q3LFD5 358 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 COBLL1Q53SF7 1204 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 TCEAL5Q5H9L2 206 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 ZNF658Q5TYW1 1059 aaPredicted RBP5.68□□□□□ -1.5
SHMT1-211ENST00000618902 LMBRD2Q68DH5 695 aaPredicted RBP5.68□□□□□ -1.5
SHMT1-211ENST00000618902 CENPPQ6IPU0 288 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 CES5AQ6NT32 575 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 TAS1R1Q7RTX1 841 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 TMC7Q7Z402 723 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 BRSK2Q8IWQ3 736 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 C12orf56Q8IXR9 622 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 ZC3H3Q8IXZ2 948 aaKnown RBP5.68□□□□□ -1.5
SHMT1-211ENST00000618902 TRIML1Q8N9V2 468 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 SMRP1Q8NCR6 262 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 CMASQ8NFW8 434 aaPredicted RBP5.68□□□□□ -1.5
SHMT1-211ENST00000618902 OR5B17Q8NGF7 314 aa5.68□□□□□ -1.5
SHMT1-211ENST00000618902 KIF18AQ8NI77 898 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms