RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 EIF1ADQ8N9N8 165 aaKnown RBP12.94□□□□□ -0.34
MATR3-227ENST00000618441 EIF2AQ9BY44 585 aaKnown RBP12.94□□□□□ -0.34
MATR3-227ENST00000618441 RNF26Q9BY78 433 aaPredicted RBP12.94□□□□□ -0.34
MATR3-227ENST00000618441 TRIM55Q9BYV6 548 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 MYH1P12882 1939 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 RGPD2P0DJD1 1756 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 C15orf38-AP3S2A0A0A6YYH1 394 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 TRMUO75648 421 aaKnown RBP12.94□□□□□ -0.34
MATR3-227ENST00000618441 POTEIP0CG38 1075 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 OTOAQ7RTW8 1153 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 ARPINQ7Z6K5 226 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 GDPD5Q8WTR4 605 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 GAB3Q8WWW8 586 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 GPCPD1Q9NPB8 672 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 KCNQ5Q9NR82 932 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.94□□□□□ -0.34
MATR3-227ENST00000618441 PXDNLA1KZ92 1463 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 FAM187AA6NFU0 413 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 PORP16435 677 aaPredicted RBP12.94□□□□□ -0.34
MATR3-227ENST00000618441 VCLP18206 1134 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 MARCKSL1P49006 195 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 MAPK10P53779 464 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 PSMD6Q15008 389 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 SFT2D3Q587I9 215 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 ZNF362Q5T0B9 420 aaPredicted RBP12.94□□□□□ -0.34
MATR3-227ENST00000618441 BTNL9Q6UXG8 535 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 LDHAL6AQ6ZMR3 332 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 TMTC3Q6ZXV5 915 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 NT5DC3Q86UY8 548 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 FBXL16Q8N461 479 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 PHF20Q9BVI0 1012 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 CEP44Q9C0F1 390 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 LRP2BPQ9P2M1 347 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 TUBGCP6Q96RT7 1819 aa12.94□□□□□ -0.34
MATR3-227ENST00000618441 MCF2LO15068 1137 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 HOXB7P09629 217 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 PEX2P28328 305 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 ARL1P40616 181 aaPredicted RBP12.93□□□□□ -0.34
MATR3-227ENST00000618441 WASHC5Q12768 1159 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 KRT81Q14533 505 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 GSTCDQ8NEC7 633 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 GIPC2Q8TF65 315 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 ATG4AQ8WYN0 398 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 SHISA4Q96DD7 197 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 RETREG1Q9H6L5 497 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 VPS51Q9UID3 782 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 ANAPC5Q9UJX4 755 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 CROTQ9UKG9 612 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 PLS3P13797 630 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 RPA3P35244 121 aaPredicted RBP12.93□□□□□ -0.34
MATR3-227ENST00000618441 CHN2P52757 468 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 ALDH18A1P54886 795 aaKnown RBP12.93□□□□□ -0.34
MATR3-227ENST00000618441 ANKDD1AQ495B1 522 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 FAM47AQ5JRC9 791 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 FAM186BQ8IYM0 893 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 RBM15Q96T37 977 aaKnown RBP eCLIP12.93□□□□□ -0.34
MATR3-227ENST00000618441 C6orf203Q9P0P8 240 aaPredicted RBP12.93□□□□□ -0.34
MATR3-227ENST00000618441 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.93□□□□□ -0.34
MATR3-227ENST00000618441 MYH15Q9Y2K3 1946 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 CAPN8A6NHC0 703 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 LRRN2O75325 713 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 TNFAIP3P21580 790 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 MCAMP43121 646 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 FASTKD5Q7L8L6 764 aaKnown RBP12.93□□□□□ -0.34
MATR3-227ENST00000618441 SERPINB12Q96P63 405 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 CSRNP1Q96S65 589 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 RRN3Q9NYV6 651 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 TTC7AQ9ULT0 858 aaPredicted RBP12.93□□□□□ -0.34
MATR3-227ENST00000618441 SPO11Q9Y5K1 396 aa12.93□□□□□ -0.34
MATR3-227ENST00000618441 RSPH10B2B2RC85 870 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 NFAT5O94916 1531 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 RSPH10BP0C881 870 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 FLT1P17948 1338 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 RPL5P46777 297 aaKnown RBP12.92□□□□□ -0.34
MATR3-227ENST00000618441 METTL21CQ5VZV1 264 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 ZNF746Q6NUN9 644 aaPredicted RBP12.92□□□□□ -0.34
MATR3-227ENST00000618441 UBL4BQ8N7F7 174 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 ZFP28Q8NHY6 868 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 FNDC8Q8TC99 324 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 CRNKL1Q9BZJ0 848 aaKnown RBP12.92□□□□□ -0.34
MATR3-227ENST00000618441 CYLDQ9NQC7 956 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 TBC1D23Q9NUY8 699 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 CNOT7Q9UIV1 285 aaKnown RBP12.92□□□□□ -0.34
MATR3-227ENST00000618441 COQ6Q9Y2Z9 468 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 TMED5Q9Y3A6 229 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 TCRBV7S2A1N4TA0A589 114 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 TBC1D12O60347 775 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 DDHD2O94830 711 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 YWHAGP61981 247 aaKnown RBP eCLIP12.92□□□□□ -0.34
MATR3-227ENST00000618441 ZNF200P98182 395 aaPredicted RBP12.92□□□□□ -0.34
MATR3-227ENST00000618441 RELAQ04206 551 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 KRT17Q04695 432 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 CNGA3Q16281 694 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 MYOCDQ8IZQ8 938 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 DDHD1Q8NEL9 900 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 PLBD2Q8NHP8 589 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 KRT35Q92764 455 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 THAP11Q96EK4 314 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 KLHL25Q9H0H3 589 aa12.92□□□□□ -0.34
MATR3-227ENST00000618441 USP29Q9HBJ7 922 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms