RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 C11orf57Q6ZUT1 292 aaPredicted RBP12.87□□□□□ -0.35
SRRT-216ENST00000618262 FNBP1Q96RU3 617 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 FAM117AQ9C073 453 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 SMARCAD1Q9H4L7 1026 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 TRMT13Q9NUP7 481 aaKnown RBP12.87□□□□□ -0.35
SRRT-216ENST00000618262 KBTBD4Q9NVX7 518 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 STK39Q9UEW8 545 aa12.87□□□□□ -0.35
SRRT-216ENST00000618262 A6NJR5 290 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 TREHO43280 583 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 RNASEH2AO75792 299 aaKnown RBP12.86□□□□□ -0.35
SRRT-216ENST00000618262 PENKP01210 267 aaPredicted RBP12.86□□□□□ -0.35
SRRT-216ENST00000618262 RPN1P04843 607 aaKnown RBP12.86□□□□□ -0.35
SRRT-216ENST00000618262 FGFR4P22455 802 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 KLRC1P26715 233 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 PMS2P54278 862 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 PPFIA1Q13136 1202 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 PTPN21Q16825 1174 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 WHAMMP3Q1A5X7 153 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 CAPN12Q6ZSI9 719 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 SFR1Q86XK3 245 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 RHPN2Q8IUC4 686 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 C7orf31Q8N865 590 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 PXYLP1Q8TE99 480 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 NSMCE1Q8WV22 266 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 SLC40A1Q9NP59 571 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 PANK4Q9NVE7 773 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 MAN1B1Q9UKM7 699 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 DAAM1Q9Y4D1 1078 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 TARSL2A2RTX5 802 aaKnown RBP12.86□□□□□ -0.35
SRRT-216ENST00000618262 N4BP1O75113 896 aaKnown RBP12.86□□□□□ -0.35
SRRT-216ENST00000618262 STBD1O95210 358 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 ATG7O95352 703 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 EYA4O95677 639 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 NFKBIAP25963 317 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 CDC25CP30307 473 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 CPT1AP50416 773 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 PURAQ00577 322 aaKnown RBP12.86□□□□□ -0.35
SRRT-216ENST00000618262 DPYDQ12882 1025 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 MFSD10Q14728 455 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 TAF11Q15544 211 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 ANO6Q4KMQ2 910 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 BOLA3Q53S33 107 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 C7orf57Q8NEG2 295 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 TEKT4Q8WW24 435 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 MCOLN1Q9GZU1 580 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 EFR3BQ9Y2G0 817 aa12.86□□□□□ -0.35
SRRT-216ENST00000618262 TISP43B9A030 160 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 MEFVO15553 781 aaPredicted RBP12.85□□□□□ -0.35
SRRT-216ENST00000618262 ADAMTS4O75173 837 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 IDO1P14902 403 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 BTF3P20290 206 aaKnown RBP12.85□□□□□ -0.35
SRRT-216ENST00000618262 MLH1P40692 756 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 CDK17Q00537 523 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 GIT2Q14161 759 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 XKR3Q5GH77 459 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 ODR4Q5SWX8 454 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 MAP3K21Q5TCX8 1036 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 SYT2Q8N9I0 419 aaPredicted RBP12.85□□□□□ -0.35
SRRT-216ENST00000618262 SVIPQ8NHG7 77 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 BSNDQ8WZ55 320 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 SGCDQ92629 289 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 RABEP2Q9H5N1 569 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 AKT3Q9Y243 479 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 SQORQ9Y6N5 450 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 A6NHS1 94 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 LRRIQ4A6NIV6 560 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 ZBTB42B2RXF5 422 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 SLC16A4O15374 487 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 IGHA2P01877 340 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 SMIM10L2AP0DMW4 78 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 SMIM10L2BP0DMW5 78 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 MAN1A1P33908 653 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 TYRO3Q06418 890 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 BRDTQ58F21 947 aaPredicted RBP12.85□□□□□ -0.35
SRRT-216ENST00000618262 COL13A1Q5TAT6 717 aaPredicted RBP12.85□□□□□ -0.35
SRRT-216ENST00000618262 EFCAB12Q6NXP0 572 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 PDXDC1Q6P996 788 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 FAM228AQ86W67 206 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 APLFQ8IW19 511 aaPredicted RBP12.85□□□□□ -0.35
SRRT-216ENST00000618262 LRRC8AQ8IWT6 810 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 C4orf19Q8IY42 314 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 MAIP1Q8WWC4 291 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 SLC7A3Q8WY07 619 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 SH3KBP1Q96B97 665 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 C8orf48Q96LL4 319 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 CCT7Q99832 543 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 MRPL44Q9H9J2 332 aaKnown RBP12.85□□□□□ -0.35
SRRT-216ENST00000618262 ANO10Q9NW15 660 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 LRRC37A2A6NM11 1700 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 IGSF9BQ9UPX0 1349 aa12.85□□□□□ -0.35
SRRT-216ENST00000618262 TRIM43BA6NCK2 446 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 TRIM49BA6NDI0 452 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 TTI1O43156 1089 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 PRPF6O94906 941 aaKnown RBP12.84□□□□□ -0.35
SRRT-216ENST00000618262 FAM13AO94988 1023 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 MYBP10242 640 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 CD44P16070 742 aaKnown RBP12.84□□□□□ -0.35
SRRT-216ENST00000618262 CENPAP49450 140 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 HSD17B7P56937 341 aa12.84□□□□□ -0.35
SRRT-216ENST00000618262 GRIK4Q16099 956 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms