RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 BEST2Q8NFU1 509 aa16.79■□□□□ 0.28
SRGAP2C-205ENST00000617209 FAM212AQ96EL1 285 aa16.79■□□□□ 0.28
SRGAP2C-205ENST00000617209 MAN1C1Q9NR34 630 aa16.79■□□□□ 0.28
SRGAP2C-205ENST00000617209 ANO9A1A5B4 782 aa16.78■□□□□ 0.28
SRGAP2C-205ENST00000617209 M0QZQ0 153 aa16.78■□□□□ 0.28
SRGAP2C-205ENST00000617209 PIRO00625 290 aa16.78■□□□□ 0.28
SRGAP2C-205ENST00000617209 EXTL3O43909 919 aa16.78■□□□□ 0.28
SRGAP2C-205ENST00000617209 TBC1D4O60343 1298 aa16.78■□□□□ 0.28
SRGAP2C-205ENST00000617209 TKTP29401 623 aaKnown RBP16.78■□□□□ 0.28
SRGAP2C-205ENST00000617209 SSTR3P32745 418 aaPredicted RBP16.78■□□□□ 0.28
SRGAP2C-205ENST00000617209 AARSP49588 968 aaKnown RBP eCLIP16.78■□□□□ 0.28
SRGAP2C-205ENST00000617209 TMEM132DQ14C87 1099 aa16.78■□□□□ 0.28
SRGAP2C-205ENST00000617209 RARS2Q5T160 578 aaKnown RBP16.78■□□□□ 0.28
SRGAP2C-205ENST00000617209 RTL10Q7L3V2 364 aa16.78■□□□□ 0.28
SRGAP2C-205ENST00000617209 BRSK2Q8IWQ3 736 aa16.78■□□□□ 0.28
SRGAP2C-205ENST00000617209 APPL2Q8NEU8 664 aa16.78■□□□□ 0.28
SRGAP2C-205ENST00000617209 SCFD1Q8WVM8 642 aa16.78■□□□□ 0.28
SRGAP2C-205ENST00000617209 CBWD1Q9BRT8 395 aa16.78■□□□□ 0.28
SRGAP2C-205ENST00000617209 FAM213AQ9BRX8 229 aa16.78■□□□□ 0.28
SRGAP2C-205ENST00000617209 GDPD2Q9HCC8 539 aa16.78■□□□□ 0.28
SRGAP2C-205ENST00000617209 KIAA1586Q9HCI6 787 aa16.78■□□□□ 0.28
SRGAP2C-205ENST00000617209 CGNQ9P2M7 1197 aaKnown RBP16.78■□□□□ 0.28
SRGAP2C-205ENST00000617209 CIZ1Q9ULV3 898 aaPredicted RBP16.78■□□□□ 0.28
SRGAP2C-205ENST00000617209 C2orf16Q68DN1 1984 aa16.77■□□□□ 0.28
SRGAP2C-205ENST00000617209 H7C4K7 107 aa16.77■□□□□ 0.28
SRGAP2C-205ENST00000617209 I3L4J1 428 aa16.77■□□□□ 0.28
SRGAP2C-205ENST00000617209 TGFB1I1O43294 461 aa16.77■□□□□ 0.28
SRGAP2C-205ENST00000617209 ZNF202O95125 648 aa16.77■□□□□ 0.28
SRGAP2C-205ENST00000617209 NFICP08651 508 aa16.77■□□□□ 0.28
SRGAP2C-205ENST00000617209 OR1D2P34982 312 aa16.77■□□□□ 0.28
SRGAP2C-205ENST00000617209 VARS2Q5ST30 1063 aaKnown RBP16.77■□□□□ 0.28
SRGAP2C-205ENST00000617209 SLC8B1Q6J4K2 584 aa16.77■□□□□ 0.28
SRGAP2C-205ENST00000617209 ARMCX5Q6P1M9 558 aa16.77■□□□□ 0.28
SRGAP2C-205ENST00000617209 TMC5Q6UXY8 1006 aa16.77■□□□□ 0.28
SRGAP2C-205ENST00000617209 KRBA2Q6ZNG9 492 aa16.77■□□□□ 0.28
SRGAP2C-205ENST00000617209 GRAMD1CQ8IYS0 662 aa16.77■□□□□ 0.28
SRGAP2C-205ENST00000617209 GPD1LQ8N335 351 aa16.77■□□□□ 0.28
SRGAP2C-205ENST00000617209 FSIP1Q8NA03 581 aa16.77■□□□□ 0.28
SRGAP2C-205ENST00000617209 KREMEN2Q8NCW0 462 aa16.77■□□□□ 0.28
SRGAP2C-205ENST00000617209 APOL5Q9BWW9 433 aa16.77■□□□□ 0.28
SRGAP2C-205ENST00000617209 OXCT2Q9BYC2 517 aaPredicted RBP16.77■□□□□ 0.28
SRGAP2C-205ENST00000617209 ZDHHC7Q9NXF8 308 aa16.77■□□□□ 0.28
SRGAP2C-205ENST00000617209 PCDHB8Q9UN66 801 aa16.77■□□□□ 0.28
SRGAP2C-205ENST00000617209 SCN1AP35498 2009 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 CCDC195A0A1B0GUA6 201 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 PI4K2BG5E9Z4 385 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 ZMYND10O75800 440 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 SPATA31D3P0C874 917 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 MCM4P33991 863 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 LILRA4P59901 499 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 UVSSAQ2YD98 709 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 C9orf57Q5W0N0 161 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 KANK3Q6NY19 840 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 RSPO2Q6UXX9 243 aaPredicted RBP16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 SPATA31D4Q6ZUB0 917 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 C12orf56Q8IXR9 622 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 ZNF461Q8TAF7 563 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 TMEM174Q8WUU8 243 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 SAAL1Q96ER3 474 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 GOLPH3LQ9H4A5 285 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 PCIF1Q9H4Z3 704 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 POMKQ9H5K3 350 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 SLC39A2Q9NP94 309 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 AGPAT3Q9NRZ7 376 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 RBAKQ9NYW8 714 aaPredicted RBP16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 FBXW11Q9UKB1 542 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 USTQ9Y2C2 406 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 CDY1Q9Y6F8 540 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 DENND4AQ7Z401 1863 aa16.76■□□□□ 0.27
SRGAP2C-205ENST00000617209 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 ZNF233A6NK53 670 aa16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 SPDYE4A6NLX3 237 aa16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 ADAM12O43184 909 aa16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 ABLIM3O94929 683 aa16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 OAZ2O95190 189 aa16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 RPN1P04843 607 aaKnown RBP16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 ALADP13716 330 aa16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 DPYDQ12882 1025 aa16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 STK4Q13043 487 aa16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 SURF1Q15526 300 aa16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 KNOP1Q1ED39 458 aaKnown RBP16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 KMT5BQ4FZB7 885 aa16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 HS2ST1Q7LGA3 356 aa16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 GLYCTKQ8IVS8 523 aa16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 EFCAB13Q8IY85 973 aa16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 ZSWIM2Q8NEG5 633 aa16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 CACTINQ8WUQ7 758 aaKnown RBP16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 CCDC34Q96HJ3 373 aa16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 PRKD2Q9BZL6 878 aa16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 EXOC1Q9NV70 894 aa16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 DPP3Q9NY33 737 aa16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 HSPBP1Q9NZL4 362 aa16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 NR2E1Q9Y466 385 aa16.75■□□□□ 0.27
SRGAP2C-205ENST00000617209 MYO10Q9HD67 2058 aa16.74■□□□□ 0.27
SRGAP2C-205ENST00000617209 ARHGEF37A1IGU5 675 aa16.74■□□□□ 0.27
SRGAP2C-205ENST00000617209 GOLGA8IPA6NC78 632 aa16.74■□□□□ 0.27
SRGAP2C-205ENST00000617209 GOLGA6L4A6NEF3 574 aa16.74■□□□□ 0.27
SRGAP2C-205ENST00000617209 GOLGA8JA6NMD2 632 aa16.74■□□□□ 0.27
SRGAP2C-205ENST00000617209 HNRNPA1P09651 372 aaKnown RBP eCLIP16.74■□□□□ 0.27
SRGAP2C-205ENST00000617209 TYMPP19971 482 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 240.3 ms