RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 HSPA2P54652 639 aa16.52■□□□□ 0.23
GPN1-212ENST00000616939 CDC42EP5Q6NZY7 148 aa16.52■□□□□ 0.23
GPN1-212ENST00000616939 DRICH1Q6PGQ1 229 aaPredicted RBP16.52■□□□□ 0.23
GPN1-212ENST00000616939 SMIM5Q71RC9 77 aa16.52■□□□□ 0.23
GPN1-212ENST00000616939 ENOSF1Q7L5Y1 443 aa16.52■□□□□ 0.23
GPN1-212ENST00000616939 NLRP9Q7RTR0 991 aa16.52■□□□□ 0.23
GPN1-212ENST00000616939 ZNF677Q86XU0 584 aa16.52■□□□□ 0.23
GPN1-212ENST00000616939 KIAA0825Q8IV33 1275 aa16.52■□□□□ 0.23
GPN1-212ENST00000616939 KATNAL2Q8IYT4 538 aa16.52■□□□□ 0.23
GPN1-212ENST00000616939 RDH13Q8NBN7 331 aa16.52■□□□□ 0.23
GPN1-212ENST00000616939 ZBTB10Q96DT7 871 aa16.52■□□□□ 0.23
GPN1-212ENST00000616939 C9orf72Q96LT7 481 aa16.52■□□□□ 0.23
GPN1-212ENST00000616939 IWS1Q96ST2 819 aa16.52■□□□□ 0.23
GPN1-212ENST00000616939 COA1Q9GZY4 146 aa16.52■□□□□ 0.23
GPN1-212ENST00000616939 GSTTP1A0A1W2PQM5 241 aa16.51■□□□□ 0.23
GPN1-212ENST00000616939 PROSCO94903 275 aa16.51■□□□□ 0.23
GPN1-212ENST00000616939 GNAT1P11488 350 aa16.51■□□□□ 0.23
GPN1-212ENST00000616939 GTF2H1P32780 548 aa16.51■□□□□ 0.23
GPN1-212ENST00000616939 GTF2IP78347 998 aa16.51■□□□□ 0.23
GPN1-212ENST00000616939 BIRC2Q13490 618 aa16.51■□□□□ 0.23
GPN1-212ENST00000616939 TRIP13Q15645 432 aaPredicted RBP16.51■□□□□ 0.23
GPN1-212ENST00000616939 CTC1Q2NKJ3 1217 aa16.51■□□□□ 0.23
GPN1-212ENST00000616939 MCOLN2Q8IZK6 566 aa16.51■□□□□ 0.23
GPN1-212ENST00000616939 SLC17A8Q8NDX2 589 aa16.51■□□□□ 0.23
GPN1-212ENST00000616939 TTC8Q8TAM2 541 aa16.51■□□□□ 0.23
GPN1-212ENST00000616939 NT5C1BQ96P26 610 aa16.51■□□□□ 0.23
GPN1-212ENST00000616939 SYT15Q9BQS2 421 aa16.51■□□□□ 0.23
GPN1-212ENST00000616939 TIPINQ9BVW5 301 aa16.51■□□□□ 0.23
GPN1-212ENST00000616939 MMADHCQ9H3L0 296 aaPredicted RBP16.51■□□□□ 0.23
GPN1-212ENST00000616939 TMEM8AQ9HCN3 771 aa16.51■□□□□ 0.23
GPN1-212ENST00000616939 PAPOLBQ9NRJ5 636 aaKnown RBP16.51■□□□□ 0.23
GPN1-212ENST00000616939 POLLQ9UGP5 575 aa16.51■□□□□ 0.23
GPN1-212ENST00000616939 TROVE2P10155 538 aaKnown RBP eCLIP16.5■□□□□ 0.23
GPN1-212ENST00000616939 UNGP13051 313 aaPredicted RBP16.5■□□□□ 0.23
GPN1-212ENST00000616939 GTF2BQ00403 316 aa16.5■□□□□ 0.23
GPN1-212ENST00000616939 MUM1Q2TAK8 710 aa16.5■□□□□ 0.23
GPN1-212ENST00000616939 USH1GQ495M9 461 aa16.5■□□□□ 0.23
GPN1-212ENST00000616939 GRIPAP1Q4V328 841 aa16.5■□□□□ 0.23
GPN1-212ENST00000616939 HHATQ5VTY9 493 aa16.5■□□□□ 0.23
GPN1-212ENST00000616939 FAM91A1Q658Y4 838 aa16.5■□□□□ 0.23
GPN1-212ENST00000616939 KRT39Q6A163 491 aa16.5■□□□□ 0.23
GPN1-212ENST00000616939 TMEM154Q6P9G4 183 aa16.5■□□□□ 0.23
GPN1-212ENST00000616939 TMEM179Q6ZVK1 233 aa16.5■□□□□ 0.23
GPN1-212ENST00000616939 OTOAQ7RTW8 1153 aa16.5■□□□□ 0.23
GPN1-212ENST00000616939 SIAH1Q8IUQ4 282 aa16.5■□□□□ 0.23
GPN1-212ENST00000616939 PPM1KQ8N3J5 372 aa16.5■□□□□ 0.23
GPN1-212ENST00000616939 SUPT20HQ8NEM7 779 aa16.5■□□□□ 0.23
GPN1-212ENST00000616939 EXD1Q8NHP7 514 aa16.5■□□□□ 0.23
GPN1-212ENST00000616939 DHX38Q92620 1227 aaKnown RBP16.5■□□□□ 0.23
GPN1-212ENST00000616939 PAIP2Q9BPZ3 127 aaKnown RBP16.5■□□□□ 0.23
GPN1-212ENST00000616939 CBWD1Q9BRT8 395 aa16.5■□□□□ 0.23
GPN1-212ENST00000616939 TEKT3Q9BXF9 490 aa16.5■□□□□ 0.23
GPN1-212ENST00000616939 UNC45AQ9H3U1 944 aa16.5■□□□□ 0.23
GPN1-212ENST00000616939 NMRK1Q9NWW6 199 aa16.5■□□□□ 0.23
GPN1-212ENST00000616939 WRAP73Q9P2S5 460 aaPredicted RBP16.5■□□□□ 0.23
GPN1-212ENST00000616939 GRID1Q9ULK0 1009 aa16.5■□□□□ 0.23
GPN1-212ENST00000616939 UMODL1Q5DID0 1318 aa16.5■□□□□ 0.23
GPN1-212ENST00000616939 SPDYE5A6NIY4 337 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 ZBTB39O15060 712 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 TOM1O60784 492 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 CCDC22O60826 627 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 DNAJC6O75061 913 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 SMIM24O75264 130 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 SPAG7O75391 227 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 SKIP12755 728 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 HOXA10P31260 410 aaPredicted RBP16.49■□□□□ 0.23
GPN1-212ENST00000616939 CERKLQ49MI3 558 aaPredicted RBP16.49■□□□□ 0.23
GPN1-212ENST00000616939 TAF1BQ53T94 588 aaPredicted RBP16.49■□□□□ 0.23
GPN1-212ENST00000616939 EFHC2Q5JST6 749 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 THEMIS2Q5TEJ8 643 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 OR52E8Q6IFG1 317 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 PRR5LQ6MZQ0 368 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 TATDN1Q6P1N9 297 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 MTHFD1LQ6UB35 978 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 RHOT1Q8IXI2 618 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 TMC2Q8TDI7 906 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 ZNF75CPQ92670 426 aaPredicted RBP16.49■□□□□ 0.23
GPN1-212ENST00000616939 PWWP2AQ96N64 755 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 LXNQ9BS40 222 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 CCDC28BQ9BUN5 200 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 PCIF1Q9H4Z3 704 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 SAYSD1Q9NPB0 183 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 SLCO1B3Q9NPD5 702 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 ANKFY1Q9P2R3 1169 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 PSMC3IPQ9P2W1 217 aaPredicted RBP16.49■□□□□ 0.23
GPN1-212ENST00000616939 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.49■□□□□ 0.23
GPN1-212ENST00000616939 NRXN2Q9P2S2 1712 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 FAM170AA1A519 330 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 HGSO14964 777 aaPredicted RBP16.49■□□□□ 0.23
GPN1-212ENST00000616939 CHMP2AO43633 222 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 ZC3H11AO75152 810 aaKnown RBP eCLIP16.49■□□□□ 0.23
GPN1-212ENST00000616939 NDUFB10O96000 172 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 ADRB2P07550 413 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 RALAP11233 206 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 PLS3P13797 630 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 HOXA13P31271 388 aaPredicted RBP16.49■□□□□ 0.23
GPN1-212ENST00000616939 TUBP50607 506 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 SLC1A5Q15758 541 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 PKN2Q16513 984 aaKnown RBP16.49■□□□□ 0.23
GPN1-212ENST00000616939 NBPF20Q3BBV1 942 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms