RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 ZNF658Q5TYW1 1059 aaPredicted RBP16.18■□□□□ 0.18
UBXN1-218ENST00000616865 CDCA2Q69YH5 1023 aaPredicted RBP16.18■□□□□ 0.18
UBXN1-218ENST00000616865 SPATA31D4Q6ZUB0 917 aa16.18■□□□□ 0.18
UBXN1-218ENST00000616865 GET4Q7L5D6 327 aaPredicted RBP16.18■□□□□ 0.18
UBXN1-218ENST00000616865 PALB2Q86YC2 1186 aa16.18■□□□□ 0.18
UBXN1-218ENST00000616865 SLC44A3Q8N4M1 653 aa16.18■□□□□ 0.18
UBXN1-218ENST00000616865 NXPE3Q969Y0 559 aa16.18■□□□□ 0.18
UBXN1-218ENST00000616865 HVCN1Q96D96 273 aa16.18■□□□□ 0.18
UBXN1-218ENST00000616865 ACCSQ96QU6 501 aa16.18■□□□□ 0.18
UBXN1-218ENST00000616865 COLEC11Q9BWP8 271 aa16.18■□□□□ 0.18
UBXN1-218ENST00000616865 GPR62Q9BZJ7 368 aa16.18■□□□□ 0.18
UBXN1-218ENST00000616865 TMEM134Q9H6X4 195 aa16.18■□□□□ 0.18
UBXN1-218ENST00000616865 FNIP2Q9P278 1114 aa16.18■□□□□ 0.18
UBXN1-218ENST00000616865 ARHGAP28Q9P2N2 729 aa16.18■□□□□ 0.18
UBXN1-218ENST00000616865 ADAM28Q9UKQ2 775 aa16.18■□□□□ 0.18
UBXN1-218ENST00000616865 CA14Q9ULX7 337 aa16.18■□□□□ 0.18
UBXN1-218ENST00000616865 EIF3DO15371 548 aaKnown RBP eCLIP16.17■□□□□ 0.18
UBXN1-218ENST00000616865 B4GALT5O43286 388 aa16.17■□□□□ 0.18
UBXN1-218ENST00000616865 AKAP5P24588 427 aa16.17■□□□□ 0.18
UBXN1-218ENST00000616865 CREMQ03060 361 aa16.17■□□□□ 0.18
UBXN1-218ENST00000616865 EHHADHQ08426 723 aa16.17■□□□□ 0.18
UBXN1-218ENST00000616865 STK4Q13043 487 aa16.17■□□□□ 0.18
UBXN1-218ENST00000616865 PRPF4BQ13523 1007 aaKnown RBP16.17■□□□□ 0.18
UBXN1-218ENST00000616865 USP41Q3LFD5 358 aa16.17■□□□□ 0.18
UBXN1-218ENST00000616865 ZC2HC1CQ53FD0 456 aaPredicted RBP16.17■□□□□ 0.18
UBXN1-218ENST00000616865 SLC27A1Q6PCB7 646 aa16.17■□□□□ 0.18
UBXN1-218ENST00000616865 GLYCTKQ8IVS8 523 aa16.17■□□□□ 0.18
UBXN1-218ENST00000616865 ST6GALNAC4Q9H4F1 302 aa16.17■□□□□ 0.18
UBXN1-218ENST00000616865 TBC1D17Q9HA65 648 aa16.17■□□□□ 0.18
UBXN1-218ENST00000616865 PIDD1Q9HB75 910 aa16.17■□□□□ 0.18
UBXN1-218ENST00000616865 TBX20Q9UMR3 447 aa16.17■□□□□ 0.18
UBXN1-218ENST00000616865 GDAQ9Y2T3 454 aa16.17■□□□□ 0.18
UBXN1-218ENST00000616865 FAM186AA6NE01 2351 aa16.17■□□□□ 0.18
UBXN1-218ENST00000616865 UBE4BO95155 1302 aa16.17■□□□□ 0.18
UBXN1-218ENST00000616865 STK25O00506 426 aa16.16■□□□□ 0.18
UBXN1-218ENST00000616865 PRPF6O94906 941 aaKnown RBP16.16■□□□□ 0.18
UBXN1-218ENST00000616865 NPTXRO95502 500 aa16.16■□□□□ 0.18
UBXN1-218ENST00000616865 LAMP2P13473 410 aa16.16■□□□□ 0.18
UBXN1-218ENST00000616865 RFX1P22670 979 aa16.16■□□□□ 0.18
UBXN1-218ENST00000616865 PPP1R2P41236 205 aa16.16■□□□□ 0.18
UBXN1-218ENST00000616865 MATR3P43243 847 aaKnown RBP eCLIP16.16■□□□□ 0.18
UBXN1-218ENST00000616865 GTF2BQ00403 316 aa16.16■□□□□ 0.18
UBXN1-218ENST00000616865 MORC3Q14149 939 aa16.16■□□□□ 0.18
UBXN1-218ENST00000616865 LILRA6Q6PI73 481 aa16.16■□□□□ 0.18
UBXN1-218ENST00000616865 CDR2LQ86X02 465 aaPredicted RBP16.16■□□□□ 0.18
UBXN1-218ENST00000616865 NELFCDQ8IXH7 590 aa16.16■□□□□ 0.18
UBXN1-218ENST00000616865 GPR152Q8TDT2 470 aa16.16■□□□□ 0.18
UBXN1-218ENST00000616865 RIN2Q8WYP3 895 aaPredicted RBP16.16■□□□□ 0.18
UBXN1-218ENST00000616865 MRPL4Q9BYD3 311 aaKnown RBP16.16■□□□□ 0.18
UBXN1-218ENST00000616865 PRKD2Q9BZL6 878 aa16.16■□□□□ 0.18
UBXN1-218ENST00000616865 TMEM206Q9H813 350 aa16.16■□□□□ 0.18
UBXN1-218ENST00000616865 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.16■□□□□ 0.18
UBXN1-218ENST00000616865 DACH1Q9UI36 760 aa16.16■□□□□ 0.18
UBXN1-218ENST00000616865 MAPK8IP1Q9UQF2 711 aa16.16■□□□□ 0.18
UBXN1-218ENST00000616865 ANHXE9PGG2 379 aa16.15■□□□□ 0.18
UBXN1-218ENST00000616865 ACKR2O00590 384 aa16.15■□□□□ 0.18
UBXN1-218ENST00000616865 RPL17P18621 184 aaKnown RBP16.15■□□□□ 0.18
UBXN1-218ENST00000616865 LIG4P49917 911 aa16.15■□□□□ 0.18
UBXN1-218ENST00000616865 CASP5P51878 434 aa16.15■□□□□ 0.18
UBXN1-218ENST00000616865 NLRP12P59046 1061 aa16.15■□□□□ 0.18
UBXN1-218ENST00000616865 HTR4Q13639 388 aa16.15■□□□□ 0.18
UBXN1-218ENST00000616865 RTP2Q5QGT7 225 aa16.15■□□□□ 0.18
UBXN1-218ENST00000616865 RBM43Q6ZSC3 357 aaKnown RBP16.15■□□□□ 0.18
UBXN1-218ENST00000616865 ERMP1Q7Z2K6 904 aa16.15■□□□□ 0.18
UBXN1-218ENST00000616865 APBB1IPQ7Z5R6 666 aaPredicted RBP16.15■□□□□ 0.18
UBXN1-218ENST00000616865 SMYD4Q8IYR2 804 aaPredicted RBP16.15■□□□□ 0.18
UBXN1-218ENST00000616865 KIAA0895Q8NCT3 520 aa16.15■□□□□ 0.18
UBXN1-218ENST00000616865 GLIS3Q8NEA6 775 aa16.15■□□□□ 0.18
UBXN1-218ENST00000616865 PRIMPOLQ96LW4 560 aa16.15■□□□□ 0.18
UBXN1-218ENST00000616865 FIZ1Q96SL8 496 aa16.15■□□□□ 0.18
UBXN1-218ENST00000616865 FGFBP2Q9BYJ0 223 aa16.15■□□□□ 0.18
UBXN1-218ENST00000616865 CCDC113Q9H0I3 377 aa16.15■□□□□ 0.18
UBXN1-218ENST00000616865 GZF1Q9H116 711 aaPredicted RBP16.15■□□□□ 0.18
UBXN1-218ENST00000616865 FZD8Q9H461 694 aa16.15■□□□□ 0.18
UBXN1-218ENST00000616865 ARHGEF3Q9NR81 526 aa16.15■□□□□ 0.18
UBXN1-218ENST00000616865 KLK14Q9P0G3 267 aa16.15■□□□□ 0.18
UBXN1-218ENST00000616865 SF3B1O75533 1304 aaKnown RBP eCLIP16.15■□□□□ 0.18
UBXN1-218ENST00000616865 SPTBN4Q9H254 2564 aa16.15■□□□□ 0.18
UBXN1-218ENST00000616865 PTPRZ1P23471 2315 aaPredicted RBP16.14■□□□□ 0.18
UBXN1-218ENST00000616865 FANCMQ8IYD8 2048 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 MIA3Q5JRA6 1907 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 A0A1B0GUA9 196 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 SYCE3A1L190 88 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 PSMA7O14818 248 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 HNRNPDLO14979 420 aaKnown RBP16.14■□□□□ 0.17
UBXN1-218ENST00000616865 ZMYND10O75800 440 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 CCDC192P0DO97 292 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 ID4P47928 161 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 HSP90AA2PQ14568 343 aaPredicted RBP16.14■□□□□ 0.17
UBXN1-218ENST00000616865 STX1AQ16623 288 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 FAM187BQ17R55 369 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 ZSCAN23Q3MJ62 389 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 KLHL10Q6JEL2 608 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 PHLDB3Q6NSJ2 640 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 PRSS55Q6UWB4 352 aaPredicted RBP16.14■□□□□ 0.17
UBXN1-218ENST00000616865 PPP4R3CPQ6ZMV5 832 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 EPM2AIP1Q7L775 607 aaPredicted RBP16.14■□□□□ 0.17
UBXN1-218ENST00000616865 HS2ST1Q7LGA3 356 aa16.14■□□□□ 0.17
UBXN1-218ENST00000616865 GUF1Q8N442 669 aaKnown RBP16.14■□□□□ 0.17
UBXN1-218ENST00000616865 MLKLQ8NB16 471 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms