RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 NOP14P78316 857 aaKnown RBP12.53□□□□□ -0.4
TARDBP-217ENST00000616545 ZBED6P86452 979 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 RNASELQ05823 741 aaKnown RBP12.53□□□□□ -0.4
TARDBP-217ENST00000616545 DSC1Q08554 894 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 TBX2Q13207 712 aaPredicted RBP12.53□□□□□ -0.4
TARDBP-217ENST00000616545 NAB2Q15742 525 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 ZNF699Q32M78 642 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 SV2CQ496J9 727 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 ZNF667Q5HYK9 610 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 GLRA4Q5JXX5 417 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 DCLRE1AQ6PJP8 1040 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.53□□□□□ -0.41e-28■■■■■ 32.6
TARDBP-217ENST00000616545 C16orf59Q7L2K0 433 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 DPH6Q7L8W6 267 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 CACNA2D4Q7Z3S7 1137 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 CMTR2Q8IYT2 770 aaKnown RBP12.53□□□□□ -0.4
TARDBP-217ENST00000616545 SPATA18Q8TC71 538 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 SEMA4DQ92854 862 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 HPDLQ96IR7 371 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 CASD1Q96PB1 797 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 PPP1R9BQ96SB3 815 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 STK33Q9BYT3 514 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 TTYH3Q9C0H2 523 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 DNAI2Q9GZS0 605 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 NIF3L1Q9GZT8 377 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 XYLT2Q9H1B5 865 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 GANQ9H2C0 597 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 CYP3A43Q9HB55 503 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 FAM207AQ9NSI2 230 aaPredicted RBP12.53□□□□□ -0.4
TARDBP-217ENST00000616545 TBC1D13Q9NVG8 400 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 MIOSQ9NXC5 875 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 ZMYND8Q9ULU4 1186 aaPredicted RBP12.53□□□□□ -0.4
TARDBP-217ENST00000616545 AGAP1Q9UPQ3 857 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 INPP5FQ9Y2H2 1132 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 LUC7L2Q9Y383 392 aaKnown RBP12.53□□□□□ -0.4
TARDBP-217ENST00000616545 MICAL3Q7RTP6 2002 aa12.53□□□□□ -0.4
TARDBP-217ENST00000616545 TMEM189-UBE2V1I3L0A0 370 aa12.52□□□□□ -0.41
TARDBP-217ENST00000616545 NOL4O94818 638 aa12.52□□□□□ -0.41
TARDBP-217ENST00000616545 POMCP01189 267 aa12.52□□□□□ -0.41
TARDBP-217ENST00000616545 POLR2BP30876 1174 aaKnown RBP12.52□□□□□ -0.41
TARDBP-217ENST00000616545 TAF6P49848 677 aa12.52□□□□□ -0.41
TARDBP-217ENST00000616545 ARID5BQ14865 1188 aa12.52□□□□□ -0.41
TARDBP-217ENST00000616545 UPP1Q16831 310 aa12.52□□□□□ -0.41
TARDBP-217ENST00000616545 TSR1Q2NL82 804 aaKnown RBP12.52□□□□□ -0.41
TARDBP-217ENST00000616545 DPY19L2P1Q6NXN4 242 aa12.52□□□□□ -0.41
TARDBP-217ENST00000616545 OTOP2Q7RTS6 562 aa12.52□□□□□ -0.41
TARDBP-217ENST00000616545 SYN2Q92777 582 aaPredicted RBP12.52□□□□□ -0.41
TARDBP-217ENST00000616545 C18orf25Q96B23 403 aaPredicted RBP12.52□□□□□ -0.41
TARDBP-217ENST00000616545 ZNF689Q96CS4 500 aaPredicted RBP12.52□□□□□ -0.41
TARDBP-217ENST00000616545 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.52□□□□□ -0.411e-11■■□□□ 11.7
TARDBP-217ENST00000616545 SIX2Q9NPC8 291 aa12.52□□□□□ -0.41
TARDBP-217ENST00000616545 GDAP2Q9NXN4 497 aa12.52□□□□□ -0.41
TARDBP-217ENST00000616545 TUBGCP4Q9UGJ1 667 aa12.52□□□□□ -0.41
TARDBP-217ENST00000616545 DNAJC12Q9UKB3 198 aa12.52□□□□□ -0.41
TARDBP-217ENST00000616545 SLC4A7Q9Y6M7 1214 aa12.52□□□□□ -0.41
TARDBP-217ENST00000616545 TBKBP1A7MCY6 615 aa12.51□□□□□ -0.41
TARDBP-217ENST00000616545 ZBBXA8MT70 800 aa12.51□□□□□ -0.41
TARDBP-217ENST00000616545 AKR1B15C9JRZ8 316 aaPredicted RBP12.51□□□□□ -0.41
TARDBP-217ENST00000616545 PODXLO00592 558 aa12.51□□□□□ -0.41
TARDBP-217ENST00000616545 NRDCO43847 1150 aa12.51□□□□□ -0.41
TARDBP-217ENST00000616545 GJB5O95377 273 aa12.51□□□□□ -0.41
TARDBP-217ENST00000616545 GYPCP04921 128 aa12.51□□□□□ -0.41
TARDBP-217ENST00000616545 ALDH2P05091 517 aa12.51□□□□□ -0.41
TARDBP-217ENST00000616545 RGS19P49795 217 aa12.51□□□□□ -0.41
TARDBP-217ENST00000616545 POLR2FP61218 127 aaKnown RBP12.51□□□□□ -0.41
TARDBP-217ENST00000616545 TNNC1P63316 161 aa12.51□□□□□ -0.41
TARDBP-217ENST00000616545 WDR72Q3MJ13 1102 aa12.51□□□□□ -0.41
TARDBP-217ENST00000616545 RASIP1Q5U651 963 aa12.51□□□□□ -0.41
TARDBP-217ENST00000616545 PHLDB3Q6NSJ2 640 aa12.51□□□□□ -0.41
TARDBP-217ENST00000616545 COLGALT2Q8IYK4 626 aa12.51□□□□□ -0.41
TARDBP-217ENST00000616545 PPM1KQ8N3J5 372 aa12.51□□□□□ -0.41
TARDBP-217ENST00000616545 OR8K1Q8NGG5 319 aa12.51□□□□□ -0.41
TARDBP-217ENST00000616545 SPAG5Q96R06 1193 aa12.51□□□□□ -0.41
TARDBP-217ENST00000616545 COLEC11Q9BWP8 271 aa12.51□□□□□ -0.41
TARDBP-217ENST00000616545 NAA15Q9BXJ9 866 aaKnown RBP12.51□□□□□ -0.41
TARDBP-217ENST00000616545 CXCL16Q9H2A7 254 aa12.51□□□□□ -0.41
TARDBP-217ENST00000616545 UBE2TQ9NPD8 197 aaPredicted RBP12.51□□□□□ -0.41
TARDBP-217ENST00000616545 ZNHIT6Q9NWK9 470 aaKnown RBP12.51□□□□□ -0.41
TARDBP-217ENST00000616545 STK39Q9UEW8 545 aa12.51□□□□□ -0.41
TARDBP-217ENST00000616545 PLAGL2Q9UPG8 496 aa12.51□□□□□ -0.41
TARDBP-217ENST00000616545 INSL6Q9Y581 213 aa12.51□□□□□ -0.41
TARDBP-217ENST00000616545 PDCD11Q14690 1871 aaKnown RBP12.51□□□□□ -0.41
TARDBP-217ENST00000616545 KPNA7A9QM74 516 aa12.5□□□□□ -0.41
TARDBP-217ENST00000616545 TRAPPC3O43617 180 aa12.5□□□□□ -0.41
TARDBP-217ENST00000616545 MFAP3LO75121 409 aa12.5□□□□□ -0.41
TARDBP-217ENST00000616545 UPP2O95045 317 aa12.5□□□□□ -0.41
TARDBP-217ENST00000616545 IBSPP21815 317 aaPredicted RBP12.5□□□□□ -0.41
TARDBP-217ENST00000616545 HNRNPH3P31942 346 aaKnown RBP12.5□□□□□ -0.41
TARDBP-217ENST00000616545 CASP14P31944 242 aa12.5□□□□□ -0.41
TARDBP-217ENST00000616545 KRT9P35527 623 aa12.5□□□□□ -0.41
TARDBP-217ENST00000616545 STAT1P42224 750 aa12.5□□□□□ -0.41
TARDBP-217ENST00000616545 AARSP49588 968 aaKnown RBP eCLIP12.5□□□□□ -0.41
TARDBP-217ENST00000616545 KLK7P49862 253 aa12.5□□□□□ -0.41
TARDBP-217ENST00000616545 AFF1P51825 1210 aaKnown RBP12.5□□□□□ -0.41
TARDBP-217ENST00000616545 LILRA4P59901 499 aa12.5□□□□□ -0.41
TARDBP-217ENST00000616545 DEFB103AP81534 67 aa12.5□□□□□ -0.41
TARDBP-217ENST00000616545 HTRA4P83105 476 aaPredicted RBP12.5□□□□□ -0.41
TARDBP-217ENST00000616545 SOX4Q06945 474 aaPredicted RBP12.5□□□□□ -0.41
TARDBP-217ENST00000616545 ELAVL2Q12926 359 aaKnown RBP12.5□□□□□ -0.41
TARDBP-217ENST00000616545 CUL2Q13617 745 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms