RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 RASA4BC9J798 803 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 RASA4O43374 803 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 ADRB2P07550 413 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 TMEM132DQ14C87 1099 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 CCL15Q16663 113 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 POTEAQ6S8J7 498 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 ARMCX2Q7L311 632 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 SLC9A9Q8IVB4 645 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 ATP8B4Q8TF62 1192 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 LENG9Q96B70 501 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 C9orf72Q96LT7 481 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 MBOAT7Q96N66 472 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 DDX56Q9NY93 547 aaKnown RBP13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 HUS1O60921 280 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 RGS7P49802 495 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 CDH6P55285 790 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 ARL4CP56559 192 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 TAP1Q03518 808 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 VGLL4Q14135 290 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 C9orf131Q5VYM1 1079 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 NLRP14Q86W24 1093 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 TRPM4Q8TD43 1214 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 ATG4AQ8WYN0 398 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 WDR91A4D1P6 747 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 MDH1P40925 334 aaKnown RBP13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 RBP5P82980 135 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 LRRC14Q15048 493 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 CYP4A22Q5TCH4 519 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 LRIG3Q6UXM1 1119 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 ANO5Q75V66 913 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 RCOR2Q8IZ40 523 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 GPC2Q8N158 579 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 LNX1Q8TBB1 728 aaPredicted RBP13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 ATP2A3Q93084 1043 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 FAF2Q96CS3 445 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 PSD3Q9NYI0 1048 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 GPRC5DQ9NZD1 345 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 LCMT1Q9UIC8 334 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 MT-ND3P03897 115 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 BRAFP15056 766 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 ADORA2BP29275 332 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 DSTYKQ6XUX3 929 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 ZC3H18Q86VM9 953 aaKnown RBP13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 CGRRF1Q99675 332 aa13.97□□□□□ -0.17
PPP4R3B-206ENST00000616407 MYH3P11055 1940 aa13.96□□□□□ -0.17
PPP4R3B-206ENST00000616407 MAP2K7O14733 419 aa13.96□□□□□ -0.17
PPP4R3B-206ENST00000616407 CPP00450 1065 aa13.96□□□□□ -0.17
PPP4R3B-206ENST00000616407 FAM153BP0C7A2 387 aa13.96□□□□□ -0.17
PPP4R3B-206ENST00000616407 MYL6P60660 151 aa13.96□□□□□ -0.17
PPP4R3B-206ENST00000616407 ORC1Q13415 861 aa13.96□□□□□ -0.17
PPP4R3B-206ENST00000616407 BYSLQ13895 437 aaKnown RBP13.96□□□□□ -0.17
PPP4R3B-206ENST00000616407 SLC29A2Q14542 456 aa13.96□□□□□ -0.17
PPP4R3B-206ENST00000616407 FAM153CQ494X1 144 aa13.96□□□□□ -0.17
PPP4R3B-206ENST00000616407 ZBED8Q8IZ13 594 aa13.96□□□□□ -0.17
PPP4R3B-206ENST00000616407 ACSF2Q96CM8 615 aaPredicted RBP13.96□□□□□ -0.17
PPP4R3B-206ENST00000616407 FAM153AQ9UHL3 310 aa13.96□□□□□ -0.17
PPP4R3B-206ENST00000616407 ITGB3P05106 788 aa13.96□□□□□ -0.17
PPP4R3B-206ENST00000616407 CLTAP09496 248 aa13.96□□□□□ -0.17
PPP4R3B-206ENST00000616407 TGFB3P10600 412 aa13.96□□□□□ -0.17
PPP4R3B-206ENST00000616407 ITIH2P19823 946 aa13.96□□□□□ -0.17
PPP4R3B-206ENST00000616407 PDIA2Q13087 525 aaKnown RBP13.96□□□□□ -0.17
PPP4R3B-206ENST00000616407 LAMC2Q13753 1193 aa13.96□□□□□ -0.17
PPP4R3B-206ENST00000616407 FBXO25Q8TCJ0 367 aa13.96□□□□□ -0.17
PPP4R3B-206ENST00000616407 TRAPPC12Q8WVT3 735 aa13.96□□□□□ -0.17
PPP4R3B-206ENST00000616407 CAMKK2Q96RR4 588 aa13.96□□□□□ -0.17
PPP4R3B-206ENST00000616407 ATRNL1Q5VV63 1379 aa13.96□□□□□ -0.18
PPP4R3B-206ENST00000616407 CICQ96RK0 1608 aaPredicted RBP13.96□□□□□ -0.18
PPP4R3B-206ENST00000616407 ITGB4P16144 1822 aa13.96□□□□□ -0.18
PPP4R3B-206ENST00000616407 GAS2O43903 313 aaKnown RBP13.96□□□□□ -0.18
PPP4R3B-206ENST00000616407 GRAP2O75791 330 aa13.96□□□□□ -0.18
PPP4R3B-206ENST00000616407 CCNE2O96020 404 aa13.96□□□□□ -0.18
PPP4R3B-206ENST00000616407 TRAIPQ9BWF2 469 aa13.96□□□□□ -0.18
PPP4R3B-206ENST00000616407 ASCC2Q9H1I8 757 aaPredicted RBP13.96□□□□□ -0.18
PPP4R3B-206ENST00000616407 EIF3HO15372 352 aaKnown RBP eCLIP13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 CALCAP01258 141 aa13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 MYBL2P10244 700 aa13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 PDGFRAP16234 1089 aa13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 FECHP22830 423 aa13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 BCAR1P56945 870 aa13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 ERVK-9P63128 1117 aa13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 LAMTOR4Q0VGL1 99 aa13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 KYNUQ16719 465 aa13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 SMTNL2Q2TAL5 461 aa13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 P3H1Q32P28 736 aa13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 CFAP36Q96G28 342 aa13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 FAM84AQ96KN4 292 aa13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 SALL4Q9UJQ4 1053 aa13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 PIN4Q9Y237 131 aaKnown RBP13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 PIGHQ14442 188 aaPredicted RBP13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 EPS8L1Q8TE68 723 aa13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 RILPQ96NA2 401 aa13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 MAGED2Q9UNF1 606 aaPredicted RBP13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 IL18RAPO95256 599 aa13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 SEC24CP53992 1094 aa13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 SPIRE1Q08AE8 756 aa13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 LONRF1Q17RB8 773 aa13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 CLEC16AQ2KHT3 1053 aa13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 FAM133BQ5BKY9 247 aaKnown RBP13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 UBA3Q8TBC4 463 aa13.95□□□□□ -0.18
PPP4R3B-206ENST00000616407 OPTNQ96CV9 577 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms