RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 MYH11P35749 1972 aa13.96□□□□□ -0.17
FOXN3-219ENST00000615335 DGAT1O75907 488 aa13.96□□□□□ -0.17
FOXN3-219ENST00000615335 FAM13AO94988 1023 aa13.96□□□□□ -0.17
FOXN3-219ENST00000615335 PGK1P00558 417 aa13.96□□□□□ -0.17
FOXN3-219ENST00000615335 HOXD8P13378 290 aaPredicted RBP13.96□□□□□ -0.17
FOXN3-219ENST00000615335 POLGP54098 1239 aaPredicted RBP13.96□□□□□ -0.17
FOXN3-219ENST00000615335 BYSLQ13895 437 aaKnown RBP13.96□□□□□ -0.17
FOXN3-219ENST00000615335 CFAP221Q4G0U5 840 aa13.96□□□□□ -0.17
FOXN3-219ENST00000615335 CMPK2Q5EBM0 449 aa13.96□□□□□ -0.17
FOXN3-219ENST00000615335 NUGGCQ68CJ6 796 aa13.96□□□□□ -0.17
FOXN3-219ENST00000615335 LMNTD2Q8IXW0 634 aa13.96□□□□□ -0.17
FOXN3-219ENST00000615335 CCDC97Q96F63 343 aaPredicted RBP13.96□□□□□ -0.17
FOXN3-219ENST00000615335 FGFBP2Q9BYJ0 223 aa13.96□□□□□ -0.17
FOXN3-219ENST00000615335 MMADHCQ9H3L0 296 aaPredicted RBP13.96□□□□□ -0.17
FOXN3-219ENST00000615335 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.96□□□□□ -0.171e-6■■■■■ 33.1
FOXN3-219ENST00000615335 RNF14Q9UBS8 474 aa13.96□□□□□ -0.17
FOXN3-219ENST00000615335 PTPN22Q9Y2R2 807 aa13.96□□□□□ -0.17
FOXN3-219ENST00000615335 ARID2Q68CP9 1835 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 HIP1RO75146 1068 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 MYL3P08590 195 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 GNASQ5JWF2 1037 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 FAM102BQ5T8I3 360 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 APBB1IPQ7Z5R6 666 aaPredicted RBP13.95□□□□□ -0.18
FOXN3-219ENST00000615335 TRIM59Q8IWR1 403 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 TRIM42Q8IWZ5 723 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 MYCT1Q8N699 235 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 SH3TC2Q8TF17 1288 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 XPNPEP3Q9NQH7 507 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 RBM12Q9NTZ6 932 aaKnown RBP13.95□□□□□ -0.18
FOXN3-219ENST00000615335 PCDHA2Q9Y5H9 948 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 HBP1O60381 514 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 ABL2P42684 1182 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 MARSP56192 900 aaKnown RBP13.95□□□□□ -0.18
FOXN3-219ENST00000615335 GJA9P57773 515 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 LMNB2Q03252 620 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 USP4Q13107 963 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 BIRC3Q13489 604 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 NAB2Q15742 525 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 ANKRD20A2Q5SQ80 823 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 PPP1R15BQ5SWA1 713 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 ANKRD20A1Q5TYW2 823 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 ANKRD20A3Q5VUR7 823 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 CPLX4Q7Z7G2 160 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 CCDC197Q8NCU1 140 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 SLC7A3Q8WY07 619 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 IQCGQ9H095 443 aaKnown RBP13.95□□□□□ -0.18
FOXN3-219ENST00000615335 PARVGQ9HBI0 331 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 TMBIM4Q9HC24 238 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 HMX1Q9NP08 348 aaPredicted RBP13.95□□□□□ -0.18
FOXN3-219ENST00000615335 SLC12A6Q9UHW9 1150 aa13.95□□□□□ -0.18
FOXN3-219ENST00000615335 MYADML2A6NDP7 307 aa13.94□□□□□ -0.18
FOXN3-219ENST00000615335 ATP2C2O75185 946 aa13.94□□□□□ -0.18
FOXN3-219ENST00000615335 PALMO75781 387 aa13.94□□□□□ -0.18
FOXN3-219ENST00000615335 ATP2A2P16615 1042 aaKnown RBP13.94□□□□□ -0.18
FOXN3-219ENST00000615335 RAPGEF1Q13905 1077 aa13.94□□□□□ -0.18
FOXN3-219ENST00000615335 QPCTQ16769 361 aa13.94□□□□□ -0.18
FOXN3-219ENST00000615335 WHAMMQ8TF30 809 aa13.94□□□□□ -0.18
FOXN3-219ENST00000615335 KAT6AQ92794 2004 aa13.94□□□□□ -0.18
FOXN3-219ENST00000615335 NAF1Q96HR8 494 aaKnown RBP13.94□□□□□ -0.18
FOXN3-219ENST00000615335 MS4A14Q96JA4 679 aa13.94□□□□□ -0.18
FOXN3-219ENST00000615335 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.94□□□□□ -0.185e-6■■■■□ 25.3
FOXN3-219ENST00000615335 PRDM16Q9HAZ2 1276 aa13.94□□□□□ -0.18
FOXN3-219ENST00000615335 GPRC5CQ9NQ84 441 aa13.94□□□□□ -0.18
FOXN3-219ENST00000615335 DPPA5A6NC42 116 aa13.94□□□□□ -0.18
FOXN3-219ENST00000615335 IGBP1P78318 339 aa13.94□□□□□ -0.18
FOXN3-219ENST00000615335 KLHL30Q0D2K2 578 aa13.94□□□□□ -0.18
FOXN3-219ENST00000615335 ITIH4Q14624 930 aa13.94□□□□□ -0.18
FOXN3-219ENST00000615335 TAF11Q15544 211 aa13.94□□□□□ -0.18
FOXN3-219ENST00000615335 TARBP2Q15633 366 aaKnown RBP13.94□□□□□ -0.18
FOXN3-219ENST00000615335 SLC18A3Q16572 532 aa13.94□□□□□ -0.18
FOXN3-219ENST00000615335 SFR1Q86XK3 245 aa13.94□□□□□ -0.18
FOXN3-219ENST00000615335 SCFD1Q8WVM8 642 aa13.94□□□□□ -0.18
FOXN3-219ENST00000615335 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.94□□□□□ -0.182e-6■■■■■ 48.3
FOXN3-219ENST00000615335 TIPINQ9BVW5 301 aa13.94□□□□□ -0.18
FOXN3-219ENST00000615335 KCTD10Q9H3F6 313 aa13.94□□□□□ -0.18
FOXN3-219ENST00000615335 C2CD2Q9Y426 696 aa13.94□□□□□ -0.18
FOXN3-219ENST00000615335 INSRRP14616 1297 aa13.93□□□□□ -0.18
FOXN3-219ENST00000615335 GAP43P17677 238 aa13.93□□□□□ -0.18
FOXN3-219ENST00000615335 KLRC1P26715 233 aa13.93□□□□□ -0.18
FOXN3-219ENST00000615335 CDC25CP30307 473 aa13.93□□□□□ -0.18
FOXN3-219ENST00000615335 SOX10P56693 466 aa13.93□□□□□ -0.18
FOXN3-219ENST00000615335 ADAM9Q13443 819 aa13.93□□□□□ -0.18
FOXN3-219ENST00000615335 EMC2Q15006 297 aa13.93□□□□□ -0.18
FOXN3-219ENST00000615335 ASIC2Q16515 512 aa13.93□□□□□ -0.18
FOXN3-219ENST00000615335 ODR4Q5SWX8 454 aa13.93□□□□□ -0.18
FOXN3-219ENST00000615335 DAW1Q8N136 415 aa13.93□□□□□ -0.18
FOXN3-219ENST00000615335 MCPH1Q8NEM0 835 aa13.93□□□□□ -0.18
FOXN3-219ENST00000615335 TRAPPC12Q8WVT3 735 aa13.93□□□□□ -0.18
FOXN3-219ENST00000615335 ZWILCHQ9H900 591 aa13.93□□□□□ -0.18
FOXN3-219ENST00000615335 DNAH12Q6ZR08 3092 aa13.93□□□□□ -0.18
FOXN3-219ENST00000615335 CETN3O15182 167 aa13.93□□□□□ -0.18
FOXN3-219ENST00000615335 FTCDO95954 541 aa13.93□□□□□ -0.18
FOXN3-219ENST00000615335 F2P00734 622 aa13.93□□□□□ -0.18
FOXN3-219ENST00000615335 MYCP01106 439 aaPredicted RBP13.93□□□□□ -0.18
FOXN3-219ENST00000615335 MYZAPP0CAP1 466 aa13.93□□□□□ -0.18
FOXN3-219ENST00000615335 RFC5P40937 340 aa13.93□□□□□ -0.18
FOXN3-219ENST00000615335 ARID5AQ03989 594 aa13.93□□□□□ -0.18
FOXN3-219ENST00000615335 MAPK7Q13164 816 aa13.93□□□□□ -0.18
FOXN3-219ENST00000615335 EDRF1Q3B7T1 1238 aa13.93□□□□□ -0.18
FOXN3-219ENST00000615335 PPP4R3CPQ6ZMV5 832 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms