RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 CYP3A4P08684 503 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 VDRP11473 427 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 RENBPP51606 427 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 DEUP1Q05D60 604 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 ZNF394Q53GI3 561 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 ACBD5Q5T8D3 534 aaPredicted RBP10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 C11orf70Q9BRQ4 267 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 MAP3K13O43283 966 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 MT-ND3P03897 115 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 SETSIPP0DME0 302 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 GUCY2CP25092 1073 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 HPDP32754 393 aaPredicted RBP10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 EPHB4P54760 987 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 TMEM62Q0P6H9 643 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 SARM1Q6SZW1 724 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 DSG4Q86SJ6 1040 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 FBXO22Q8NEZ5 403 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 CFAP36Q96G28 342 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 ZNF518BQ9C0D4 1074 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 BFARQ9NZS9 450 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 NFAT5O94916 1531 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 KRT38O76015 456 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 MAP4P27816 1152 aaKnown RBP10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 NMT1P30419 496 aaKnown RBP10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 AVPR1AP37288 418 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 ARHGAP25P42331 645 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 PEX6Q13608 980 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 CDH18Q13634 790 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 PHLDB2Q86SQ0 1253 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 ILDR1Q86SU0 546 aaPredicted RBP10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 WHAMMQ8TF30 809 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 TRIM15Q9C019 465 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 DHX35Q9H5Z1 703 aaKnown RBP10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 KLHL14Q9P2G3 628 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 SLIT2O94813 1529 aa10.28□□□□□ -0.76
TNFRSF9-204ENST00000615230 RASGRF2O14827 1237 aa10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 CASP7P55210 303 aa10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 MRPS6P82932 125 aaKnown RBP10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 PABPC1LQ4VXU2 614 aaKnown RBP10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 ADGRF2Q8IZF7 708 aa10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 RBBP8NLQ8NC74 664 aaPredicted RBP10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 PDCD6IPQ8WUM4 868 aaKnown RBP10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 NUF2Q9BZD4 464 aa10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 TRIM9Q9C026 710 aa10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 NCKAP1Q9Y2A7 1128 aa10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 MRFAP1Q9Y605 127 aa10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 ANO9A1A5B4 782 aa10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 TOM1L1O75674 476 aa10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 TOMM70O94826 608 aa10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 CLCN1P35523 988 aa10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 FMO5P49326 533 aa10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 ZNF131P52739 623 aa10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 GIT2Q14161 759 aa10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 PDK1Q15118 436 aa10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 CELF3Q5SZQ8 465 aaKnown RBP10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 SPOPLQ6IQ16 392 aa10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 DEFB128Q7Z7B8 93 aa10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 CALML6Q8TD86 181 aa10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 PYROXD1Q8WU10 500 aa10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 RUBCNQ92622 972 aa10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 PRDM16Q9HAZ2 1276 aa10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.27□□□□□ -0.76
TNFRSF9-204ENST00000615230 AKAP12Q02952 1782 aa10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 PLA2G4FQ68DD2 849 aa10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 TSEN34Q9BSV6 310 aaKnown RBP10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 DPH5Q9H2P9 285 aa10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 MRPL17Q9NRX2 175 aaKnown RBP10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 ERICH4A6NGS2 130 aa10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 CYB561D2O14569 222 aa10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 NVLO15381 856 aaKnown RBP10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 IRF1P10914 325 aa10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 PRAMEP78395 509 aa10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 NOL9Q5SY16 702 aaKnown RBP10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 LMBRD2Q68DH5 695 aaPredicted RBP10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 PLPPR4Q7Z2D5 763 aa10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 ABRAQ8N0Z2 381 aa10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 ATL2Q8NHH9 583 aa10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 SPIRE2Q8WWL2 714 aa10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 FBXO32Q969P5 355 aa10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 RMDN1Q96DB5 314 aa10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 CDC23Q9UJX2 597 aa10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 PTPN22Q9Y2R2 807 aa10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 CNTNAP2Q9UHC6 1331 aa10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 MOXD2PA6NHM9 499 aa10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 C3orf70A6NLC5 250 aaPredicted RBP10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 GPD1P21695 349 aa10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 ZNF135P52742 658 aaPredicted RBP10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 MMEL1Q495T6 779 aa10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 TTC19Q6DKK2 380 aaPredicted RBP10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 IL31Q6EBC2 164 aa10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 C11orf57Q6ZUT1 292 aaPredicted RBP10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 VSIG1Q86XK7 387 aa10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 ZDHHC17Q8IUH5 632 aa10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 LRGUKQ96M69 825 aa10.27□□□□□ -0.77
TNFRSF9-204ENST00000615230 SIGLEC1Q9BZZ2 1709 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 CHD2O14647 1828 aaKnown RBP10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 H0Y626 953 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 HLA-DRAP01903 254 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 GRK4P32298 578 aa10.26□□□□□ -0.77
TNFRSF9-204ENST00000615230 SMARCB1Q12824 385 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms