RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 ZNF784Q8NCA9 323 aaPredicted RBP9.4□□□□□ -0.91
VPS11-206ENST00000614944 MSANTD4Q8NCY6 345 aa9.4□□□□□ -0.91
VPS11-206ENST00000614944 PIGOQ8TEQ8 1089 aa9.4□□□□□ -0.91
VPS11-206ENST00000614944 CCT7Q99832 543 aa9.4□□□□□ -0.91
VPS11-206ENST00000614944 ANKZF1Q9H8Y5 726 aa9.4□□□□□ -0.91
VPS11-206ENST00000614944 SUCLA2Q9P2R7 463 aaPredicted RBP9.4□□□□□ -0.91
VPS11-206ENST00000614944 ZNF148Q9UQR1 794 aa9.4□□□□□ -0.91
VPS11-206ENST00000614944 ZMYM2Q9UBW7 1377 aa9.39□□□□□ -0.91
VPS11-206ENST00000614944 DDX39AO00148 427 aaKnown RBP9.39□□□□□ -0.91
VPS11-206ENST00000614944 ANKRD40Q6AI12 368 aa9.39□□□□□ -0.91
VPS11-206ENST00000614944 IRF2BP1Q8IU81 584 aa9.39□□□□□ -0.91
VPS11-206ENST00000614944 LINC01465Q8N7H1 131 aa9.39□□□□□ -0.91
VPS11-206ENST00000614944 SRPK1Q96SB4 655 aaKnown RBP9.39□□□□□ -0.91
VPS11-206ENST00000614944 AZI2Q9H6S1 392 aa9.39□□□□□ -0.91
VPS11-206ENST00000614944 TMEM134Q9H6X4 195 aa9.39□□□□□ -0.91
VPS11-206ENST00000614944 DMAC2Q9NW81 257 aa9.39□□□□□ -0.91
VPS11-206ENST00000614944 ZNF180Q9UJW8 692 aa9.39□□□□□ -0.91
VPS11-206ENST00000614944 A6NJR5 290 aa9.39□□□□□ -0.91
VPS11-206ENST00000614944 TTI1O43156 1089 aa9.39□□□□□ -0.91
VPS11-206ENST00000614944 DIAPH2O60879 1101 aa9.39□□□□□ -0.91
VPS11-206ENST00000614944 B3GALNT1O75752 331 aa9.39□□□□□ -0.91
VPS11-206ENST00000614944 USP46P62068 366 aa9.39□□□□□ -0.91
VPS11-206ENST00000614944 MRPS35P82673 323 aaKnown RBP9.39□□□□□ -0.91
VPS11-206ENST00000614944 GSTM4Q03013 218 aa9.39□□□□□ -0.91
VPS11-206ENST00000614944 TRIM14Q14142 442 aa9.39□□□□□ -0.91
VPS11-206ENST00000614944 ZNF365Q70YC5 407 aa9.39□□□□□ -0.91
VPS11-206ENST00000614944 ZNF554Q86TJ5 538 aa9.39□□□□□ -0.91
VPS11-206ENST00000614944 PALB2Q86YC2 1186 aa9.39□□□□□ -0.91
VPS11-206ENST00000614944 SPATA17Q96L03 361 aa9.39□□□□□ -0.91
VPS11-206ENST00000614944 ERAP1Q9NZ08 941 aa9.39□□□□□ -0.91
VPS11-206ENST00000614944 KLHL42Q9P2K6 505 aa9.39□□□□□ -0.91
VPS11-206ENST00000614944 PMM2O15305 246 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 ASAP2O43150 1006 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 UPP2O95045 317 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 HOXD13P35453 343 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 NAMPTP43490 491 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 CDK17Q00537 523 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 PPIDQ08752 370 aaKnown RBP9.38□□□□□ -0.91
VPS11-206ENST00000614944 XRCC4Q13426 336 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 LBRQ14739 615 aaKnown RBP9.38□□□□□ -0.91
VPS11-206ENST00000614944 LY6KQ17RY6 165 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 XKR9Q5GH70 373 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 GKAP1Q5VSY0 366 aaPredicted RBP9.38□□□□□ -0.91
VPS11-206ENST00000614944 FRMD5Q7Z6J6 570 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 SPATA33Q96N06 139 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 FAM184BQ9ULE4 1060 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 TMCC3Q9ULS5 477 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 EXOC7Q9UPT5 735 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 GOLGB1Q14789 3259 aaKnown RBP9.38□□□□□ -0.91
VPS11-206ENST00000614944 MAGEB2O15479 319 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 IDEP14735 1019 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 PDE6CP51160 858 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 TBX2Q13207 712 aaPredicted RBP9.38□□□□□ -0.91
VPS11-206ENST00000614944 SEPT7Q16181 437 aaKnown RBP9.38□□□□□ -0.91
VPS11-206ENST00000614944 FIGNQ5HY92 759 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 IER5Q5VY09 327 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 SLC2A7Q6PXP3 512 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 VSTM4Q8IW00 320 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 PLPP6Q8IY26 295 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 PXYLP1Q8TE99 480 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 RPGRIP1Q96KN7 1286 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 ARHGAP28Q9P2N2 729 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 STYXL1Q9Y6J8 313 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 A0A087WWV3 80 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 NPHP3-ACAD11A0A0J9YXS1 232 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 KCNJ18B7U540 433 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 RPLP2P05387 115 aaKnown RBP9.38□□□□□ -0.91
VPS11-206ENST00000614944 HOXC8P31273 242 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 PMS1P54277 932 aaKnown RBP9.38□□□□□ -0.91
VPS11-206ENST00000614944 CDC42EP1Q00587 391 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 KCNJ12Q14500 433 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 GRAMD4Q6IC98 578 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 CYP4F22Q6NT55 531 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 SRGAP1Q7Z6B7 1085 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 MAP4K3Q8IVH8 894 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 SMYD4Q8IYR2 804 aaPredicted RBP9.38□□□□□ -0.91
VPS11-206ENST00000614944 CSGALNACT2Q8N6G5 542 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 GDAP1Q8TB36 358 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 WDR60Q8WVS4 1066 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 VTI1AQ96AJ9 217 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 CEP170P1Q96L14 293 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 ACCSQ96QU6 501 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 PNKPQ96T60 521 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 XPNPEP1Q9NQW7 623 aa9.38□□□□□ -0.91
VPS11-206ENST00000614944 LGALS16A8MUM7 142 aa9.37□□□□□ -0.91
VPS11-206ENST00000614944 ZBTB42B2RXF5 422 aa9.37□□□□□ -0.91
VPS11-206ENST00000614944 HAS3O00219 553 aa9.37□□□□□ -0.91
VPS11-206ENST00000614944 TNPO2O14787 897 aaKnown RBP9.37□□□□□ -0.91
VPS11-206ENST00000614944 USO1O60763 962 aaKnown RBP9.37□□□□□ -0.91
VPS11-206ENST00000614944 DNAJC8O75937 253 aaPredicted RBP9.37□□□□□ -0.91
VPS11-206ENST00000614944 MMP3P08254 477 aa9.37□□□□□ -0.91
VPS11-206ENST00000614944 CYBAP13498 195 aa9.37□□□□□ -0.91
VPS11-206ENST00000614944 SMPD1P17405 629 aa9.37□□□□□ -0.91
VPS11-206ENST00000614944 SFPQP23246 707 aaKnown RBP eCLIP9.37□□□□□ -0.91
VPS11-206ENST00000614944 CST5P28325 142 aaPredicted RBP9.37□□□□□ -0.91
VPS11-206ENST00000614944 UBASH3AP57075 661 aa9.37□□□□□ -0.91
VPS11-206ENST00000614944 P3H1Q32P28 736 aa9.37□□□□□ -0.91
VPS11-206ENST00000614944 FAM178BQ8IXR5 827 aa9.37□□□□□ -0.91
VPS11-206ENST00000614944 RETREG2Q8NC44 543 aa9.37□□□□□ -0.91
VPS11-206ENST00000614944 TRIM47Q96LD4 638 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms