RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 GRID1Q9ULK0 1009 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 ZNF532Q9HCE3 1301 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 ATP1A4Q13733 1029 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 TAS2R42Q7RTR8 314 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 GALNT15Q8N3T1 639 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 TPRKBQ9Y3C4 175 aa9.19□□□□□ -0.94
TTC28-208ENST00000612946 RTCBQ9Y3I0 505 aaKnown RBP9.19□□□□□ -0.94
TTC28-208ENST00000612946 RAPGEF3O95398 923 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 MYL2P10916 166 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 LPIN1Q14693 890 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 SLC10A5Q5PT55 438 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 CCNJLQ8IV13 435 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 EHD1Q9H4M9 534 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 STN1Q9H668 368 aaKnown RBP9.18□□□□□ -0.94
TTC28-208ENST00000612946 SLC12A6Q9UHW9 1150 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 ESYT3A0FGR9 886 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 PHGDHO43175 533 aaKnown RBP9.18□□□□□ -0.94
TTC28-208ENST00000612946 ELF3P78545 371 aaPredicted RBP9.18□□□□□ -0.94
TTC28-208ENST00000612946 TFDP1Q14186 410 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 ARID5BQ14865 1188 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 PARP6Q2NL67 630 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 BICRALQ6AI39 1079 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 RBM43Q6ZSC3 357 aaKnown RBP9.18□□□□□ -0.94
TTC28-208ENST00000612946 MREGQ8N565 214 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 RNF217Q8TC41 542 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 GDPD5Q8WTR4 605 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 ACTL7BQ9Y614 415 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 SKAP2O75563 359 aaPredicted RBP9.18□□□□□ -0.94
TTC28-208ENST00000612946 KYQ8NBH2 561 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 IMPAD1Q9NX62 359 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 ING3Q9NXR8 418 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 PTTG2Q9NZH5 202 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 MAP2K7O14733 419 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 TMOD1P28289 359 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 ACAP3Q96P50 834 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 PIH1D3Q9NQM4 214 aaKnown RBP9.18□□□□□ -0.94
TTC28-208ENST00000612946 ADGRF5Q8IZF2 1346 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 PNMA6EA0A0J9YXQ4 647 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 CCDC195A0A1B0GUA6 201 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 TTC26A0AVF1 554 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 BTN3A3O00478 584 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 ZCCHC18P0CG32 403 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 PTGS2P35354 604 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 C12orf60Q5U649 245 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 TTC30BQ8N4P2 665 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 SYTL5Q8TDW5 730 aaPredicted RBP9.18□□□□□ -0.94
TTC28-208ENST00000612946 EYA3Q99504 573 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 NDNQ99608 321 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 FGFR4P22455 802 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 TYK2P29597 1187 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 ZNF200P98182 395 aaPredicted RBP9.18□□□□□ -0.94
TTC28-208ENST00000612946 TAGAPQ8N103 731 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 AMER2Q8N7J2 671 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 PDCD10Q9BUL8 212 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 KIAA1024Q9UPX6 916 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 HNRNPDLO14979 420 aaKnown RBP9.18□□□□□ -0.94
TTC28-208ENST00000612946 STK4Q13043 487 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 C2CD6Q53TS8 623 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 BARGINQ6ZT62 677 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 NLRP3Q96P20 1036 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 CARD14Q9BXL6 1004 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 TRIM39Q9HCM9 518 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 GIN1Q9NXP7 522 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 CCDC182A6NF36 153 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 ADCY6O43306 1168 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 ZNF862O60290 1169 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 SNAP91O60641 907 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 UFL1O94874 794 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 MYL4P12829 197 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 GFPT1Q06210 699 aaPredicted RBP9.18□□□□□ -0.94
TTC28-208ENST00000612946 MCUQ8NE86 351 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 DIS3LQ8TF46 1054 aaKnown RBP9.18□□□□□ -0.94
TTC28-208ENST00000612946 PGM2Q96G03 612 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 NAT9Q9BTE0 207 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 TEKT3Q9BXF9 490 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 ACAD9Q9H845 621 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 SOX5P35711 763 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 USP11P51784 963 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 TSNQ15631 228 aaKnown RBP9.18□□□□□ -0.94
TTC28-208ENST00000612946 MIGA2Q7L4E1 593 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 BLOC1S5Q8TDH9 187 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 COX4I2Q96KJ9 171 aa9.18□□□□□ -0.94
TTC28-208ENST00000612946 GCKRQ14397 625 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 NR1D2Q14995 579 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 CCDC60Q8IWA6 550 aaPredicted RBP9.17□□□□□ -0.94
TTC28-208ENST00000612946 ADPGKQ9BRR6 497 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 UBE2TQ9NPD8 197 aaPredicted RBP9.17□□□□□ -0.94
TTC28-208ENST00000612946 RBM12Q9NTZ6 932 aaKnown RBP9.17□□□□□ -0.94
TTC28-208ENST00000612946 VPS9D1Q9Y2B5 631 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 TMA7Q9Y2S6 64 aaKnown RBP9.17□□□□□ -0.94
TTC28-208ENST00000612946 AKAP5P24588 427 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 RORBQ92753 470 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 GJA10Q969M2 543 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 CASZ1Q86V15 1759 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 RNF103O00237 685 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 RARGP13631 454 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 TNFAIP2Q03169 654 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 PDZK1Q5T2W1 519 aa9.17□□□□□ -0.94
TTC28-208ENST00000612946 AENQ8WTP8 325 aaKnown RBP9.17□□□□□ -0.94
TTC28-208ENST00000612946 CALN1Q9BXU9 219 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms