RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 VNN1O95497 513 aa9.59□□□□□ -0.87
CCDC47-207ENST00000612558 FAM228BP0C875 321 aa9.59□□□□□ -0.87
CCDC47-207ENST00000612558 STAG3L1P0CL83 205 aa9.59□□□□□ -0.87
CCDC47-207ENST00000612558 PNMA6AP0CW24 399 aaPredicted RBP9.59□□□□□ -0.87
CCDC47-207ENST00000612558 DARSP14868 501 aaKnown RBP9.59□□□□□ -0.87
CCDC47-207ENST00000612558 CST5P28325 142 aaPredicted RBP9.59□□□□□ -0.87
CCDC47-207ENST00000612558 PIK3CAP42336 1068 aa9.59□□□□□ -0.87
CCDC47-207ENST00000612558 TMEM62Q0P6H9 643 aa9.59□□□□□ -0.87
CCDC47-207ENST00000612558 NBPF20Q3BBV1 942 aa9.59□□□□□ -0.87
CCDC47-207ENST00000612558 ZNF569Q5MCW4 686 aa9.59□□□□□ -0.87
CCDC47-207ENST00000612558 MAP3K21Q5TCX8 1036 aa9.59□□□□□ -0.87
CCDC47-207ENST00000612558 TAF2Q6P1X5 1199 aa9.59□□□□□ -0.87
CCDC47-207ENST00000612558 CXCL17Q6UXB2 119 aa9.59□□□□□ -0.87
CCDC47-207ENST00000612558 FAM71AQ8IYT1 594 aa9.59□□□□□ -0.87
CCDC47-207ENST00000612558 KLHDC9Q8NEP7 349 aa9.59□□□□□ -0.87
CCDC47-207ENST00000612558 OR5B17Q8NGF7 314 aa9.59□□□□□ -0.87
CCDC47-207ENST00000612558 SHC3Q92529 594 aa9.59□□□□□ -0.87
CCDC47-207ENST00000612558 CPB2Q96IY4 423 aa9.59□□□□□ -0.87
CCDC47-207ENST00000612558 KREMEN1Q96MU8 473 aa9.59□□□□□ -0.87
CCDC47-207ENST00000612558 C1orf112Q9NSG2 853 aa9.59□□□□□ -0.87
CCDC47-207ENST00000612558 GTF2IRD1Q9UHL9 959 aa9.59□□□□□ -0.87
CCDC47-207ENST00000612558 TFR2Q9UP52 801 aa9.59□□□□□ -0.87
CCDC47-207ENST00000612558 GINS2Q9Y248 185 aa9.59□□□□□ -0.87
CCDC47-207ENST00000612558 FKTNO75072 461 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 TNNC2P02585 160 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 RPLP2P05387 115 aaKnown RBP9.58□□□□□ -0.88
CCDC47-207ENST00000612558 EIF4BP23588 611 aaKnown RBP9.58□□□□□ -0.88
CCDC47-207ENST00000612558 AXLP30530 894 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 PRMT2P55345 433 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 OSTNP61366 133 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 NCOA4Q13772 614 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 NAB2Q15742 525 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 KCNA10Q16322 511 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 DCAF4L1Q3SXM0 396 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 CCSAPQ6IQ19 270 aaPredicted RBP9.58□□□□□ -0.88
CCDC47-207ENST00000612558 ALKBH5Q6P6C2 394 aaKnown RBP9.58□□□□□ -0.88
CCDC47-207ENST00000612558 CATSPER4Q7RTX7 472 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 TRAPPC11Q7Z392 1133 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 CEP120Q8N960 986 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 PCSK9Q8NBP7 692 aaKnown RBP9.58□□□□□ -0.88
CCDC47-207ENST00000612558 SLC30A5Q8TAD4 765 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 KAT5Q92993 513 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 ANKRD36BP1Q96IX9 119 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 FAM84AQ96KN4 292 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 OSMRQ99650 979 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 SYT11Q9BT88 431 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 PI4K2AQ9BTU6 479 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 ASB7Q9H672 318 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.58□□□□□ -0.88
CCDC47-207ENST00000612558 SAGE1Q9NXZ1 904 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 TRIM10Q9UDY6 481 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 DDX20Q9UHI6 824 aaKnown RBP9.58□□□□□ -0.88
CCDC47-207ENST00000612558 NAGPAQ9UK23 515 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 DDX3XO00571 662 aaKnown RBP eCLIP9.58□□□□□ -0.88
CCDC47-207ENST00000612558 FANCGO15287 622 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 ASGR1P07306 291 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 TMEM191BP0C7N4 346 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 CXCL8P10145 99 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 TNFAIP3P21580 790 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 FGFR4P22455 802 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 TBXAS1P24557 533 aaPredicted RBP9.58□□□□□ -0.88
CCDC47-207ENST00000612558 HOXA11P31270 313 aaPredicted RBP9.58□□□□□ -0.88
CCDC47-207ENST00000612558 USP8P40818 1118 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 CRYBB1P53674 252 aaPredicted RBP9.58□□□□□ -0.88
CCDC47-207ENST00000612558 TFAMQ00059 246 aaKnown RBP9.58□□□□□ -0.88
CCDC47-207ENST00000612558 SNX17Q15036 470 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 SGSM1Q2NKQ1 1148 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 NOTUMQ6P988 496 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 SLC27A1Q6PCB7 646 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 RNF180Q86T96 592 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 RSPH3Q86UC2 560 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 SESTD1Q86VW0 696 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 CD302Q8IX05 232 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 TMEM192Q8IY95 271 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 SLC35F6Q8N357 371 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 RNF10Q8N5U6 811 aaKnown RBP9.58□□□□□ -0.88
CCDC47-207ENST00000612558 MYRIPQ8NFW9 859 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 SECISBP2LQ93073 1101 aaKnown RBP9.58□□□□□ -0.88
CCDC47-207ENST00000612558 ACAP3Q96P50 834 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 AGPAT1Q99943 283 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 REPIN1Q9BWE0 567 aaKnown RBP9.58□□□□□ -0.88
CCDC47-207ENST00000612558 IMPG2Q9BZV3 1241 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 MTMR12Q9C0I1 747 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 L2HGDHQ9H9P8 463 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 INTUQ9ULD6 942 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 NENFQ9UMX5 172 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 DUSP10Q9Y6W6 482 aa9.58□□□□□ -0.88
CCDC47-207ENST00000612558 ATP8B3O60423 1300 aa9.57□□□□□ -0.88
CCDC47-207ENST00000612558 ANK1P16157 1881 aa9.57□□□□□ -0.88
CCDC47-207ENST00000612558 MYH10P35580 1976 aa9.57□□□□□ -0.88
CCDC47-207ENST00000612558 MACROD2A1Z1Q3 448 aa9.57□□□□□ -0.88
CCDC47-207ENST00000612558 CTAGE9A4FU28 777 aa9.57□□□□□ -0.88
CCDC47-207ENST00000612558 LACTBL1A8MY62 500 aa9.57□□□□□ -0.88
CCDC47-207ENST00000612558 M0QZ92 97 aa9.57□□□□□ -0.88
CCDC47-207ENST00000612558 CYP26A1O43174 497 aa9.57□□□□□ -0.88
CCDC47-207ENST00000612558 CABYRO75952 493 aa9.57□□□□□ -0.88
CCDC47-207ENST00000612558 URI1O94763 535 aaPredicted RBP9.57□□□□□ -0.88
CCDC47-207ENST00000612558 ASS1P00966 412 aaKnown RBP9.57□□□□□ -0.88
CCDC47-207ENST00000612558 CST3P01034 146 aaPredicted RBP9.57□□□□□ -0.88
CCDC47-207ENST00000612558 GRM5P41594 1212 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms