RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 GAD2Q05329 585 aa14.92□□□□□ -0.02
COL6A1-207ENST00000612273 ORC1Q13415 861 aa14.92□□□□□ -0.02
COL6A1-207ENST00000612273 MTMR2Q13614 643 aa14.92□□□□□ -0.02
COL6A1-207ENST00000612273 PRKG1Q13976 671 aa14.92□□□□□ -0.02
COL6A1-207ENST00000612273 PGM5Q15124 567 aa14.92□□□□□ -0.02
COL6A1-207ENST00000612273 KCNT1Q5JUK3 1230 aa14.92□□□□□ -0.02
COL6A1-207ENST00000612273 ZBTB33Q86T24 672 aa14.92□□□□□ -0.02
COL6A1-207ENST00000612273 ZBED8Q8IZ13 594 aa14.92□□□□□ -0.02
COL6A1-207ENST00000612273 TMEM130Q8N3G9 435 aa14.92□□□□□ -0.02
COL6A1-207ENST00000612273 YY1AP1Q9H869 796 aa14.92□□□□□ -0.02
COL6A1-207ENST00000612273 SLC12A4Q9UP95 1085 aa14.92□□□□□ -0.02
COL6A1-207ENST00000612273 MAGEA4P43358 317 aa14.92□□□□□ -0.02
COL6A1-207ENST00000612273 HADHBP55084 474 aaKnown RBP14.92□□□□□ -0.02
COL6A1-207ENST00000612273 CLUL1Q15846 466 aa14.92□□□□□ -0.02
COL6A1-207ENST00000612273 PKN2Q16513 984 aaKnown RBP14.92□□□□□ -0.02
COL6A1-207ENST00000612273 CYP1B1Q16678 543 aa14.92□□□□□ -0.02
COL6A1-207ENST00000612273 FAM160B2Q86V87 743 aa14.92□□□□□ -0.02
COL6A1-207ENST00000612273 ERICH1Q86X53 443 aa14.92□□□□□ -0.02
COL6A1-207ENST00000612273 ERP27Q96DN0 273 aa14.92□□□□□ -0.02
COL6A1-207ENST00000612273 TMEM121Q9BTD3 319 aa14.92□□□□□ -0.02
COL6A1-207ENST00000612273 PDGFDQ9GZP0 370 aaPredicted RBP14.92□□□□□ -0.02
COL6A1-207ENST00000612273 MCM8Q9UJA3 840 aa14.92□□□□□ -0.02
COL6A1-207ENST00000612273 DCTN4Q9UJW0 460 aa14.92□□□□□ -0.02
COL6A1-207ENST00000612273 F8VP50 259 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 EGFRP00533 1210 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 CA4P22748 312 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 GNA15P30679 374 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 ARSEP51690 589 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 MGAT5Q09328 741 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 ITIH4Q14624 930 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 CYP4A22Q5TCH4 519 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 TRIM68Q6AZZ1 485 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 MIS18BP1Q6P0N0 1132 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 GPD1LQ8N335 351 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 AKT1S1Q96B36 256 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 ATG4CQ96DT6 458 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 DDX27Q96GQ7 796 aaKnown RBP14.91□□□□□ -0.02
COL6A1-207ENST00000612273 TARS2Q9BW92 718 aaKnown RBP14.91□□□□□ -0.02
COL6A1-207ENST00000612273 TRAIPQ9BWF2 469 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 LRRD1A4D1F6 860 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 P4HA2O15460 535 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 OVGP1Q12889 678 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 DCUN1D2Q6PH85 259 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 SERPINB12Q96P63 405 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 PDCD2LQ9BRP1 358 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 POLR3FQ9H1D9 316 aaPredicted RBP14.91□□□□□ -0.02
COL6A1-207ENST00000612273 DNAJC5Q9H3Z4 198 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 WHRNQ9P202 907 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 HAO1Q9UJM8 370 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 SGK1O00141 431 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 KRT1P04264 644 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 FDX1P10109 184 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 GHRP10912 638 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 GPC3P51654 580 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 COPS2P61201 443 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 PCNX4Q63HM2 1172 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 MFSD7Q6UXD7 560 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 NEU2Q9Y3R4 380 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 MYPNQ86TC9 1320 aa14.91□□□□□ -0.02
COL6A1-207ENST00000612273 A0A1W2PPM1 405 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 YY1P25490 414 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 SLC8A1P32418 973 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 GBP1P32455 592 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 HSD17B4P51659 736 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 WDR4P57081 412 aaKnown RBP14.9□□□□□ -0.02
COL6A1-207ENST00000612273 TDRD10Q5VZ19 366 aaKnown RBP14.9□□□□□ -0.02
COL6A1-207ENST00000612273 EEPD1Q7L9B9 569 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 ECHDC2Q86YB7 292 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 MAP4K3Q8IVH8 894 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 MCEEQ96PE7 176 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 CCDC77Q9BR77 488 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 ZWILCHQ9H900 591 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 SLC24A3Q9HC58 644 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 ARL2BPQ9Y2Y0 163 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 UBIAD1Q9Y5Z9 338 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 ASNSP08243 561 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 PECAM1P16284 738 aaPredicted RBP14.9□□□□□ -0.02
COL6A1-207ENST00000612273 EFTUD2Q15029 972 aaKnown RBP eCLIP14.9□□□□□ -0.029e-7■■■■■ 41.1
COL6A1-207ENST00000612273 CGB2Q6NT52 195 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 OR5B17Q8NGF7 314 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 IWS1Q96ST2 819 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 TBC1D22BQ9NU19 505 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 PPP1R1BQ9UD71 204 aaPredicted RBP14.9□□□□□ -0.02
COL6A1-207ENST00000612273 PCDHB2Q9Y5E7 798 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 IVNS1ABPQ9Y6Y0 642 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 PIK3R2O00459 728 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 NEFHP12036 1026 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 UNGP13051 313 aaPredicted RBP14.9□□□□□ -0.02
COL6A1-207ENST00000612273 NCKAP1LP55160 1127 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 RSBN1LQ6PCB5 846 aaPredicted RBP14.9□□□□□ -0.02
COL6A1-207ENST00000612273 CCDC60Q8IWA6 550 aaPredicted RBP14.9□□□□□ -0.02
COL6A1-207ENST00000612273 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.9□□□□□ -0.02
COL6A1-207ENST00000612273 CKAP2Q8WWK9 683 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 ROPN1BQ9BZX4 212 aaPredicted RBP14.9□□□□□ -0.02
COL6A1-207ENST00000612273 ROPN1Q9HAT0 212 aaPredicted RBP14.9□□□□□ -0.02
COL6A1-207ENST00000612273 APOBEC3GQ9HC16 384 aaKnown RBP14.9□□□□□ -0.02
COL6A1-207ENST00000612273 PCDHA10Q9Y5I2 948 aa14.9□□□□□ -0.02
COL6A1-207ENST00000612273 CDH16O75309 829 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 CBX6O95503 412 aa14.89□□□□□ -0.03
COL6A1-207ENST00000612273 WEE2P0C1S8 567 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms