RNA–Protein interactions for RNA: ENST00000612195.4

TVP23A-210, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TVP23A, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-210ENST00000612195 SHISA7A6NL88 538 aa18.29■□□□□ 0.52
TVP23A-210ENST00000612195 LAD1O00515 517 aa18.29■□□□□ 0.52
TVP23A-210ENST00000612195 ZNF197O14709 1029 aa18.29■□□□□ 0.52
TVP23A-210ENST00000612195 MCM4P33991 863 aa18.29■□□□□ 0.52
TVP23A-210ENST00000612195 RAD51AP2Q09MP3 1159 aa18.29■□□□□ 0.52
TVP23A-210ENST00000612195 FZD5Q13467 585 aa18.29■□□□□ 0.52
TVP23A-210ENST00000612195 GRM2Q14416 872 aa18.29■□□□□ 0.52
TVP23A-210ENST00000612195 ZRSR1Q15695 479 aaKnown RBP18.29■□□□□ 0.52
TVP23A-210ENST00000612195 SLC10A6Q3KNW5 377 aa18.29■□□□□ 0.52
TVP23A-210ENST00000612195 TPGS2Q68CL5 300 aa18.29■□□□□ 0.52
TVP23A-210ENST00000612195 DTHD1Q6ZMT9 781 aa18.29■□□□□ 0.52
TVP23A-210ENST00000612195 PDZD4Q76G19 769 aaPredicted RBP18.29■□□□□ 0.52
TVP23A-210ENST00000612195 HS6ST3Q8IZP7 471 aa18.29■□□□□ 0.52
TVP23A-210ENST00000612195 ATRIPQ8WXE1 791 aa18.29■□□□□ 0.52
TVP23A-210ENST00000612195 TBC1D32Q96NH3 1257 aa18.29■□□□□ 0.52
TVP23A-210ENST00000612195 SH2B1Q9NRF2 756 aaPredicted RBP18.29■□□□□ 0.52
TVP23A-210ENST00000612195 ANKFY1Q9P2R3 1169 aa18.29■□□□□ 0.52
TVP23A-210ENST00000612195 NCOR2Q9Y618 2525 aa18.29■□□□□ 0.52
TVP23A-210ENST00000612195 PDCD11Q14690 1871 aaKnown RBP18.29■□□□□ 0.52
TVP23A-210ENST00000612195 SPTLC1O15269 473 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 NCAM2O15394 837 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 MICAL2O94851 1124 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 GUCY2CP25092 1073 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 PRPHP41219 470 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 RPS9P46781 194 aaKnown RBP18.28■□□□□ 0.52
TVP23A-210ENST00000612195 ADCY1Q08828 1119 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 STRN3Q13033 797 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 CYP4A22Q5TCH4 519 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 ZNF280DQ6N043 979 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 TSSK4Q6SA08 328 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 DGLUCYQ7Z3D6 616 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 TMEM130Q8N3G9 435 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 TMEM161BQ8NDZ6 487 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 APPL2Q8NEU8 664 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 SPIRE2Q8WWL2 714 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 DDX12PQ92771 950 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 DNASE1L2Q92874 299 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 ZSWIM3Q96MP5 696 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 ASB16Q96NS5 453 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 BRD9Q9H8M2 597 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 ZFP14Q9HCL3 533 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 CEP72Q9P209 647 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 TUBGCP4Q9UGJ1 667 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 MRPS17Q9Y2R5 130 aaKnown RBP18.28■□□□□ 0.52
TVP23A-210ENST00000612195 PCDHGA2Q9Y5H1 932 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 MYH11P35749 1972 aa18.28■□□□□ 0.52
TVP23A-210ENST00000612195 MOSPD3O75425 235 aa18.27■□□□□ 0.52
TVP23A-210ENST00000612195 TOM1L1O75674 476 aa18.27■□□□□ 0.52
TVP23A-210ENST00000612195 MAPTP10636 758 aaKnown RBP18.27■□□□□ 0.52
TVP23A-210ENST00000612195 TWF1Q12792 350 aa18.27■□□□□ 0.52
TVP23A-210ENST00000612195 NOLC1Q14978 699 aaKnown RBP eCLIP18.27■□□□□ 0.52
TVP23A-210ENST00000612195 IQCEQ6IPM2 695 aa18.27■□□□□ 0.52
TVP23A-210ENST00000612195 ELMOD1Q8N336 334 aa18.27■□□□□ 0.52
TVP23A-210ENST00000612195 ZBTB44Q8NCP5 570 aa18.27■□□□□ 0.52
TVP23A-210ENST00000612195 NELL1Q92832 810 aa18.27■□□□□ 0.52
TVP23A-210ENST00000612195 BORCS6Q96GS4 357 aa18.27■□□□□ 0.52
TVP23A-210ENST00000612195 ZNF512Q96ME7 567 aaPredicted RBP18.27■□□□□ 0.52
TVP23A-210ENST00000612195 PNMA5Q96PV4 448 aa18.27■□□□□ 0.52
TVP23A-210ENST00000612195 KIF2CQ99661 725 aa18.27■□□□□ 0.52
TVP23A-210ENST00000612195 TRMT61BQ9BVS5 477 aaKnown RBP18.27■□□□□ 0.52
TVP23A-210ENST00000612195 TIPINQ9BVW5 301 aa18.27■□□□□ 0.52
TVP23A-210ENST00000612195 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.27■□□□□ 0.52
TVP23A-210ENST00000612195 ZSCAN32Q9NX65 697 aa18.27■□□□□ 0.52
TVP23A-210ENST00000612195 AFF4Q9UHB7 1163 aaKnown RBP18.27■□□□□ 0.52
TVP23A-210ENST00000612195 PCDHB8Q9UN66 801 aa18.27■□□□□ 0.52
TVP23A-210ENST00000612195 MED19A0JLT2 244 aaPredicted RBP18.26■□□□□ 0.51
TVP23A-210ENST00000612195 MYL4P12829 197 aa18.26■□□□□ 0.51
TVP23A-210ENST00000612195 PLS3P13797 630 aa18.26■□□□□ 0.51
TVP23A-210ENST00000612195 GJA1P17302 382 aa18.26■□□□□ 0.51
TVP23A-210ENST00000612195 MARCKSP29966 332 aaPredicted RBP18.26■□□□□ 0.51
TVP23A-210ENST00000612195 SMTNP53814 917 aa18.26■□□□□ 0.51
TVP23A-210ENST00000612195 SPAG1Q07617 926 aa18.26■□□□□ 0.51
TVP23A-210ENST00000612195 MTAPQ13126 283 aa18.26■□□□□ 0.51
TVP23A-210ENST00000612195 PUM1Q14671 1186 aaKnown RBP eCLIP18.26■□□□□ 0.51
TVP23A-210ENST00000612195 RNF19BQ6ZMZ0 732 aa18.26■□□□□ 0.51
TVP23A-210ENST00000612195 ZNF687Q8N1G0 1237 aa18.26■□□□□ 0.51
TVP23A-210ENST00000612195 SMARCD2Q92925 531 aa18.26■□□□□ 0.51
TVP23A-210ENST00000612195 PLIN2Q99541 437 aa18.26■□□□□ 0.51
TVP23A-210ENST00000612195 NCDNQ9UBB6 729 aa18.26■□□□□ 0.51
TVP23A-210ENST00000612195 KCNG1Q9UIX4 513 aa18.26■□□□□ 0.51
TVP23A-210ENST00000612195 MAFFQ9ULX9 164 aa18.26■□□□□ 0.51
TVP23A-210ENST00000612195 NDRG2Q9UN36 371 aaKnown RBP18.26■□□□□ 0.51
TVP23A-210ENST00000612195 CLDN3O15551 220 aa18.25■□□□□ 0.51
TVP23A-210ENST00000612195 CXCL8P10145 99 aa18.25■□□□□ 0.51
TVP23A-210ENST00000612195 CPB1P15086 417 aa18.25■□□□□ 0.51
TVP23A-210ENST00000612195 GDI1P31150 447 aa18.25■□□□□ 0.51
TVP23A-210ENST00000612195 VIPR2P41587 438 aa18.25■□□□□ 0.51
TVP23A-210ENST00000612195 MCL1Q07820 350 aa18.25■□□□□ 0.51
TVP23A-210ENST00000612195 HYIQ5T013 277 aa18.25■□□□□ 0.51
TVP23A-210ENST00000612195 VITQ6UXI7 678 aa18.25■□□□□ 0.51
TVP23A-210ENST00000612195 ZPBP2Q6X784 338 aa18.25■□□□□ 0.51
TVP23A-210ENST00000612195 MAP4K3Q8IVH8 894 aa18.25■□□□□ 0.51
TVP23A-210ENST00000612195 SYT2Q8N9I0 419 aaPredicted RBP18.25■□□□□ 0.51
TVP23A-210ENST00000612195 IRF7Q92985 503 aa18.25■□□□□ 0.51
TVP23A-210ENST00000612195 HAPLN2Q9GZV7 340 aa18.25■□□□□ 0.51
TVP23A-210ENST00000612195 ZNF334Q9HCZ1 680 aaPredicted RBP18.25■□□□□ 0.51
TVP23A-210ENST00000612195 PRMT8Q9NR22 394 aaPredicted RBP18.25■□□□□ 0.51
TVP23A-210ENST00000612195 DLL3Q9NYJ7 618 aa18.25■□□□□ 0.51
TVP23A-210ENST00000612195 TIMM13Q9Y5L4 95 aaPredicted RBP18.25■□□□□ 0.51
TVP23A-210ENST00000612195 TICRRQ7Z2Z1 1910 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms