RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 FAAH2Q6GMR7 532 aa12.59□□□□□ -0.39
CTCFL-217ENST00000608425 SAMD3Q8N6K7 520 aa12.59□□□□□ -0.39
CTCFL-217ENST00000608425 CEP44Q9C0F1 390 aa12.59□□□□□ -0.39
CTCFL-217ENST00000608425 STMN4Q9H169 189 aaPredicted RBP12.59□□□□□ -0.39
CTCFL-217ENST00000608425 TIMMDC1Q9NPL8 285 aa12.59□□□□□ -0.39
CTCFL-217ENST00000608425 TFCP2L1Q9NZI6 479 aa12.59□□□□□ -0.39
CTCFL-217ENST00000608425 RPL26L1Q9UNX3 145 aaKnown RBP12.59□□□□□ -0.39
CTCFL-217ENST00000608425 PRELID1Q9Y255 219 aa12.59□□□□□ -0.39
CTCFL-217ENST00000608425 TRMUO75648 421 aaKnown RBP12.59□□□□□ -0.39
CTCFL-217ENST00000608425 DCTN3O75935 186 aa12.59□□□□□ -0.39
CTCFL-217ENST00000608425 DDAH1O94760 285 aa12.59□□□□□ -0.39
CTCFL-217ENST00000608425 HAUS5O94927 633 aa12.59□□□□□ -0.39
CTCFL-217ENST00000608425 FUCA1P04066 466 aa12.59□□□□□ -0.39
CTCFL-217ENST00000608425 EIF2B2P49770 351 aaKnown RBP12.59□□□□□ -0.39
CTCFL-217ENST00000608425 ATP2C1P98194 919 aaPredicted RBP12.59□□□□□ -0.39
CTCFL-217ENST00000608425 NONOQ15233 471 aaKnown RBP eCLIP12.59□□□□□ -0.39
CTCFL-217ENST00000608425 FAM83BQ5T0W9 1011 aa12.59□□□□□ -0.39
CTCFL-217ENST00000608425 MFSD5Q6N075 450 aa12.59□□□□□ -0.39
CTCFL-217ENST00000608425 BTNL9Q6UXG8 535 aa12.59□□□□□ -0.39
CTCFL-217ENST00000608425 ANKK1Q8NFD2 765 aa12.59□□□□□ -0.39
CTCFL-217ENST00000608425 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.59□□□□□ -0.39
CTCFL-217ENST00000608425 RBM38Q9H0Z9 239 aaKnown RBP12.59□□□□□ -0.39
CTCFL-217ENST00000608425 CDK5RAP2Q96SN8 1893 aa12.59□□□□□ -0.39
CTCFL-217ENST00000608425 C2orf71A6NGG8 1288 aa12.58□□□□□ -0.39
CTCFL-217ENST00000608425 BUD23O43709 281 aaKnown RBP12.58□□□□□ -0.39
CTCFL-217ENST00000608425 PDE4DQ08499 809 aa12.58□□□□□ -0.39
CTCFL-217ENST00000608425 MKRN3Q13064 507 aaKnown RBP12.58□□□□□ -0.39
CTCFL-217ENST00000608425 ITGA9Q13797 1035 aa12.58□□□□□ -0.39
CTCFL-217ENST00000608425 PDK3Q15120 406 aa12.58□□□□□ -0.39
CTCFL-217ENST00000608425 ZYXQ15942 572 aaKnown RBP12.58□□□□□ -0.39
CTCFL-217ENST00000608425 CRY2Q49AN0 593 aa12.58□□□□□ -0.39
CTCFL-217ENST00000608425 ZNF394Q53GI3 561 aa12.58□□□□□ -0.39
CTCFL-217ENST00000608425 SLC27A3Q5K4L6 730 aa12.58□□□□□ -0.39
CTCFL-217ENST00000608425 IFIT1BQ5T764 474 aaKnown RBP12.58□□□□□ -0.39
CTCFL-217ENST00000608425 SEPT12Q8IYM1 358 aa12.58□□□□□ -0.39
CTCFL-217ENST00000608425 RASGEF1CQ8N431 466 aa12.58□□□□□ -0.39
CTCFL-217ENST00000608425 GLIS3Q8NEA6 775 aa12.58□□□□□ -0.39
CTCFL-217ENST00000608425 TPCN2Q8NHX9 752 aa12.58□□□□□ -0.39
CTCFL-217ENST00000608425 PWWP2AQ96N64 755 aa12.58□□□□□ -0.39
CTCFL-217ENST00000608425 POP1Q99575 1024 aaKnown RBP12.58□□□□□ -0.39
CTCFL-217ENST00000608425 FBXO6Q9NRD1 293 aaPredicted RBP12.58□□□□□ -0.39
CTCFL-217ENST00000608425 TRNAU1APQ9NX07 287 aaKnown RBP12.58□□□□□ -0.39
CTCFL-217ENST00000608425 NDE1Q9NXR1 346 aa12.58□□□□□ -0.39
CTCFL-217ENST00000608425 KANSL3Q9P2N6 904 aa12.58□□□□□ -0.39
CTCFL-217ENST00000608425 SYNPO2Q9UMS6 1093 aa12.58□□□□□ -0.39
CTCFL-217ENST00000608425 LTBP1Q14766 1721 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 SH3PXD2BA1X283 911 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 USP17L12C9JPN9 530 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 USP17L21D6R901 530 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 ADCY6O43306 1168 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 CCDC22O60826 627 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 ZBED1O96006 694 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 SERPING1P05155 500 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 TKTP29401 623 aaKnown RBP12.58□□□□□ -0.4
CTCFL-217ENST00000608425 GRM2Q14416 872 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 RRP1BQ14684 758 aaKnown RBP12.58□□□□□ -0.4
CTCFL-217ENST00000608425 LLGL1Q15334 1064 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 RNF111Q6ZNA4 994 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 CATIPQ7Z7H3 387 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 PEX5LQ8IYB4 626 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 SYT2Q8N9I0 419 aaPredicted RBP12.58□□□□□ -0.4
CTCFL-217ENST00000608425 SCAIQ8N9R8 606 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 OR6Y1Q8NGX8 325 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 TMEM109Q9BVC6 243 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 CDC42EP4Q9H3Q1 356 aaKnown RBP12.58□□□□□ -0.4
CTCFL-217ENST00000608425 LRRC4BQ9NT99 713 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 NKIRAS1Q9NYS0 192 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 VPS51Q9UID3 782 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 FBXO9Q9UK97 447 aaPredicted RBP12.58□□□□□ -0.4
CTCFL-217ENST00000608425 CCPG1Q9ULG6 757 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 PTPN22Q9Y2R2 807 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 COQ6Q9Y2Z9 468 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 STARD13Q9Y3M8 1113 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 ATP6V0A2Q9Y487 856 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 GPC6Q9Y625 555 aaPredicted RBP12.58□□□□□ -0.4
CTCFL-217ENST00000608425 ROBO3Q96MS0 1386 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 DDX60LQ5H9U9 1706 aaKnown RBP12.58□□□□□ -0.4
CTCFL-217ENST00000608425 A6NL46 340 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 CES2O00748 559 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 RHOBTB3O94955 611 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 GAS8O95995 478 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 VCLP18206 1134 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 TCF7P36402 384 aaPredicted RBP12.58□□□□□ -0.4
CTCFL-217ENST00000608425 PTENP60484 403 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 NOP14P78316 857 aaKnown RBP12.58□□□□□ -0.4
CTCFL-217ENST00000608425 KLHL30Q0D2K2 578 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 GK3PQ14409 553 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 PRR5LQ6MZQ0 368 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 ELMSAN1Q6PJG2 1045 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 TTC7BQ86TV6 843 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 NLRX1Q86UT6 975 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 TXNRD3Q86VQ6 643 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 CCDC24Q8N4L8 307 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 RFWD2Q8NHY2 731 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 JDP2Q8WYK2 163 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 GRAMD1AQ96CP6 724 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 CCT7Q99832 543 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 SENP6Q9GZR1 1112 aaPredicted RBP12.58□□□□□ -0.4
CTCFL-217ENST00000608425 USP40Q9NVE5 1235 aa12.58□□□□□ -0.4
CTCFL-217ENST00000608425 SAP30BPQ9UHR5 308 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms