RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 PRG3Q9Y2Y8 225 aaPredicted RBP10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 NUB1Q9Y5A7 615 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 VWA8A3KMH1 1905 aa10.24□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TRIM49BA6NDI0 452 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 EPOPA6NHQ4 379 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 LRRIQ3A6PVS8 624 aaPredicted RBP10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 M0QZQ0 153 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 P4HA2O15460 535 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 N4BP1O75113 896 aaKnown RBP10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 FAM163BP0C2L3 166 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 DLATP10515 647 aaKnown RBP10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ODC1P11926 461 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TYMPP19971 482 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 PBX3P40426 434 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CASP4P49662 377 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TAF6P49848 677 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 VAMP7P51809 220 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 PMS1P54277 932 aaKnown RBP10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 RBP5P82980 135 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 DSG1Q02413 1049 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TYRO3Q06418 890 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ZACNQ401N2 412 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ISM2Q6H9L7 571 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ANKS3Q6ZW76 656 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 DPH6Q7L8W6 267 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 SPRED2Q7Z698 418 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TMEM173Q86WV6 379 aaPredicted RBP10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 C1orf127Q8N9H9 656 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ZSWIM2Q8NEG5 633 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 APPL2Q8NEU8 664 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CXorf38Q8TB03 319 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ENOX1Q8TC92 643 aaKnown RBP10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 PIK3R5Q8WYR1 880 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 C18orf25Q96B23 403 aaPredicted RBP10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 BORCS6Q96GS4 357 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 GUCD1Q96NT3 240 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CDX2Q99626 313 aaPredicted RBP10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 DUSP9Q99956 384 aaKnown RBP10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 MTMR12Q9C0I1 747 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 GZF1Q9H116 711 aaPredicted RBP10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CXCL16Q9H2A7 254 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 THAP9Q9H5L6 903 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 NSUN3Q9H649 340 aaKnown RBP10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 GOLGA2P5Q9HBQ8 144 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TMEM8AQ9HCN3 771 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 FNIP2Q9P278 1114 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 MYO9BQ13459 2157 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 SCN1AP35498 2009 aa10.23□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CDH23Q9H251 3354 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 GRM6O15303 877 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ITGB3P05106 788 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 SRGAP2BP0DMP2 458 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 FOSL2P15408 326 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 FGFR3P22607 806 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 EEF1GP26641 437 aaKnown RBP10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 LILRA4P59901 499 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 MYL5Q02045 173 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 NFKBIBQ15653 356 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TPD52L1Q16890 204 aaPredicted RBP10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CCDC40Q4G0X9 1142 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 KRT39Q6A163 491 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 KIAA1841Q6NSI8 718 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ELMSAN1Q6PJG2 1045 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 C15orf39Q6ZRI6 1047 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TRAPPC11Q7Z392 1133 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TMC7Q7Z402 723 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 PPFIBP1Q86W92 1011 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TRIM59Q8IWR1 403 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 VPS52Q8N1B4 723 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TMEM86AQ8N2M4 240 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 RDH13Q8NBN7 331 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 C3orf58Q8NDZ4 430 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 BCL7CQ8WUZ0 217 aaPredicted RBP10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 SLC35C1Q96A29 364 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CCDC127Q96BQ5 260 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TCF25Q9BQ70 676 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 PAAF1Q9BRP4 392 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TTPALQ9BTX7 342 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 IMPG2Q9BZV3 1241 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ALG13Q9NP73 1137 aaKnown RBP10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ENTPD7Q9NQZ7 604 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 MRPL17Q9NRX2 175 aaKnown RBP10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 GDAP2Q9NXN4 497 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 DPP7Q9UHL4 492 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 PCDHB8Q9UN66 801 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 STXBP5LQ9Y2K9 1186 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 MTCH2Q9Y6C9 303 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 PTPRJQ12913 1337 aa10.22□□□□□ -0.77
SQSTM1P1-201ENST00000603451 KPNA7A9QM74 516 aa10.21□□□□□ -0.77
SQSTM1P1-201ENST00000603451 NT5C1B-RDH14C9J2C7 533 aa10.21□□□□□ -0.77
SQSTM1P1-201ENST00000603451 H7C4K7 107 aa10.21□□□□□ -0.77
SQSTM1P1-201ENST00000603451 RBAK-RBAKDNI3L0D1 243 aa10.21□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CYP11A1P05108 521 aa10.21□□□□□ -0.77
SQSTM1P1-201ENST00000603451 P4HA1P13674 534 aa10.21□□□□□ -0.77
SQSTM1P1-201ENST00000603451 POLR2BP30876 1174 aaKnown RBP10.21□□□□□ -0.77
SQSTM1P1-201ENST00000603451 NDUFV1P49821 464 aa10.21□□□□□ -0.77
SQSTM1P1-201ENST00000603451 MXI1P50539 228 aa10.21□□□□□ -0.77
SQSTM1P1-201ENST00000603451 WNT7BP56706 349 aa10.21□□□□□ -0.77
SQSTM1P1-201ENST00000603451 SPAG1Q07617 926 aa10.21□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CETN1Q12798 172 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms