RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 LRPAP1P30533 357 aa17.21■□□□□ 0.35
PPFIA4-213ENST00000601609 VARS2Q5ST30 1063 aaKnown RBP17.21■□□□□ 0.35
PPFIA4-213ENST00000601609 CNNM4Q6P4Q7 775 aa17.21■□□□□ 0.35
PPFIA4-213ENST00000601609 CCDC149Q6ZUS6 474 aa17.21■□□□□ 0.35
PPFIA4-213ENST00000601609 GPR149Q86SP6 731 aa17.21■□□□□ 0.35
PPFIA4-213ENST00000601609 RNF135Q8IUD6 432 aa17.21■□□□□ 0.35
PPFIA4-213ENST00000601609 APPL2Q8NEU8 664 aa17.21■□□□□ 0.35
PPFIA4-213ENST00000601609 SMG7Q92540 1137 aaKnown RBP17.21■□□□□ 0.35
PPFIA4-213ENST00000601609 PAGE5Q96GU1 130 aa17.21■□□□□ 0.35
PPFIA4-213ENST00000601609 CBWD1Q9BRT8 395 aa17.21■□□□□ 0.35
PPFIA4-213ENST00000601609 EPHX3Q9H6B9 360 aa17.21■□□□□ 0.35
PPFIA4-213ENST00000601609 SLC39A2Q9NP94 309 aa17.21■□□□□ 0.35
PPFIA4-213ENST00000601609 RBAKQ9NYW8 714 aaPredicted RBP17.21■□□□□ 0.35
PPFIA4-213ENST00000601609 MTRRQ9UBK8 725 aa17.21■□□□□ 0.35
PPFIA4-213ENST00000601609 TCHHQ07283 1943 aa17.21■□□□□ 0.35
PPFIA4-213ENST00000601609 PVALEFA0A1B0GWK0 134 aa17.2■□□□□ 0.34
PPFIA4-213ENST00000601609 LOC730098B7Z3J9 87 aa17.2■□□□□ 0.34
PPFIA4-213ENST00000601609 ADAM12O43184 909 aa17.2■□□□□ 0.34
PPFIA4-213ENST00000601609 DCXO43602 365 aa17.2■□□□□ 0.34
PPFIA4-213ENST00000601609 ALADP13716 330 aa17.2■□□□□ 0.34
PPFIA4-213ENST00000601609 NDUFA8P51970 172 aa17.2■□□□□ 0.34
PPFIA4-213ENST00000601609 CTXN3Q4LDR2 81 aa17.2■□□□□ 0.34
PPFIA4-213ENST00000601609 PPM1LQ5SGD2 360 aa17.2■□□□□ 0.34
PPFIA4-213ENST00000601609 SPATA1Q5VX52 437 aa17.2■□□□□ 0.34
PPFIA4-213ENST00000601609 ZNF280DQ6N043 979 aa17.2■□□□□ 0.34
PPFIA4-213ENST00000601609 USP37Q86T82 979 aa17.2■□□□□ 0.34
PPFIA4-213ENST00000601609 GPD1LQ8N335 351 aa17.2■□□□□ 0.34
PPFIA4-213ENST00000601609 TDRD5Q8NAT2 981 aaKnown RBP17.2■□□□□ 0.34
PPFIA4-213ENST00000601609 HDAC7Q8WUI4 952 aa17.2■□□□□ 0.34
PPFIA4-213ENST00000601609 KHSRPQ92945 711 aaKnown RBP eCLIP17.2■□□□□ 0.34
PPFIA4-213ENST00000601609 CCDC47Q96A33 483 aaKnown RBP17.2■□□□□ 0.34
PPFIA4-213ENST00000601609 SUSD3Q96L08 255 aa17.2■□□□□ 0.34
PPFIA4-213ENST00000601609 MUTYHQ9UIF7 546 aa17.2■□□□□ 0.34
PPFIA4-213ENST00000601609 FBXW11Q9UKB1 542 aa17.2■□□□□ 0.34
PPFIA4-213ENST00000601609 PCDHB8Q9UN66 801 aa17.2■□□□□ 0.34
PPFIA4-213ENST00000601609 DERAQ9Y315 318 aa17.2■□□□□ 0.34
PPFIA4-213ENST00000601609 C2CD2Q9Y426 696 aa17.2■□□□□ 0.34
PPFIA4-213ENST00000601609 UBE4BO95155 1302 aa17.2■□□□□ 0.34
PPFIA4-213ENST00000601609 EXTL3O43909 919 aa17.19■□□□□ 0.34
PPFIA4-213ENST00000601609 C8AP07357 584 aa17.19■□□□□ 0.34
PPFIA4-213ENST00000601609 TFAMQ00059 246 aaKnown RBP17.19■□□□□ 0.34
PPFIA4-213ENST00000601609 ZBTB6Q15916 424 aa17.19■□□□□ 0.34
PPFIA4-213ENST00000601609 CRELD2Q6UXH1 353 aaPredicted RBP17.19■□□□□ 0.34
PPFIA4-213ENST00000601609 C15orf39Q6ZRI6 1047 aa17.19■□□□□ 0.34
PPFIA4-213ENST00000601609 HS2ST1Q7LGA3 356 aa17.19■□□□□ 0.34
PPFIA4-213ENST00000601609 BRSK2Q8IWQ3 736 aa17.19■□□□□ 0.34
PPFIA4-213ENST00000601609 CMASQ8NFW8 434 aaPredicted RBP17.19■□□□□ 0.34
PPFIA4-213ENST00000601609 FEZF2Q8TBJ5 459 aa17.19■□□□□ 0.34
PPFIA4-213ENST00000601609 CCDC34Q96HJ3 373 aa17.19■□□□□ 0.34
PPFIA4-213ENST00000601609 C1QTNF1Q9BXJ1 281 aa17.19■□□□□ 0.34
PPFIA4-213ENST00000601609 ZDHHC7Q9NXF8 308 aa17.19■□□□□ 0.34
PPFIA4-213ENST00000601609 DPP3Q9NY33 737 aa17.19■□□□□ 0.34
PPFIA4-213ENST00000601609 POLIQ9UNA4 740 aa17.19■□□□□ 0.34
PPFIA4-213ENST00000601609 HPSEQ9Y251 543 aa17.19■□□□□ 0.34
PPFIA4-213ENST00000601609 BACE2Q9Y5Z0 518 aa17.19■□□□□ 0.34
PPFIA4-213ENST00000601609 ANK1P16157 1881 aa17.18■□□□□ 0.34
PPFIA4-213ENST00000601609 A0A1W2PQ27 194 aa17.18■□□□□ 0.34
PPFIA4-213ENST00000601609 A0A1W2PQ64 194 aa17.18■□□□□ 0.34
PPFIA4-213ENST00000601609 A0A1W2PQD8 194 aa17.18■□□□□ 0.34
PPFIA4-213ENST00000601609 KIAA0391O15091 583 aaKnown RBP17.18■□□□□ 0.34
PPFIA4-213ENST00000601609 ZMYND10O75800 440 aa17.18■□□□□ 0.34
PPFIA4-213ENST00000601609 ADRB2P07550 413 aa17.18■□□□□ 0.34
PPFIA4-213ENST00000601609 ODC1P11926 461 aa17.18■□□□□ 0.34
PPFIA4-213ENST00000601609 CPB1P15086 417 aa17.18■□□□□ 0.34
PPFIA4-213ENST00000601609 ELF1P32519 619 aa17.18■□□□□ 0.34
PPFIA4-213ENST00000601609 POU5F1Q01860 360 aaKnown RBP17.18■□□□□ 0.34
PPFIA4-213ENST00000601609 YWHAHQ04917 246 aaPredicted RBP17.18■□□□□ 0.34
PPFIA4-213ENST00000601609 RAB33AQ14088 237 aa17.18■□□□□ 0.34
PPFIA4-213ENST00000601609 C9orf57Q5W0N0 161 aa17.18■□□□□ 0.34
PPFIA4-213ENST00000601609 LILRA6Q6PI73 481 aa17.18■□□□□ 0.34
PPFIA4-213ENST00000601609 ZSWIM2Q8NEG5 633 aa17.18■□□□□ 0.34
PPFIA4-213ENST00000601609 SLC7A14Q8TBB6 771 aa17.18■□□□□ 0.34
PPFIA4-213ENST00000601609 ACSF2Q96CM8 615 aaPredicted RBP17.18■□□□□ 0.34
PPFIA4-213ENST00000601609 HSPBP1Q9NZL4 362 aa17.18■□□□□ 0.34
PPFIA4-213ENST00000601609 R3HCC1Q9Y3T6 440 aaKnown RBP17.18■□□□□ 0.34
PPFIA4-213ENST00000601609 TIMM13Q9Y5L4 95 aaPredicted RBP17.18■□□□□ 0.34
PPFIA4-213ENST00000601609 ARHGEF37A1IGU5 675 aa17.17■□□□□ 0.34
PPFIA4-213ENST00000601609 FAM86C2PA6NEL3 165 aa17.17■□□□□ 0.34
PPFIA4-213ENST00000601609 C2CD4DB7Z1M9 353 aa17.17■□□□□ 0.34
PPFIA4-213ENST00000601609 PI4K2BG5E9Z4 385 aa17.17■□□□□ 0.34
PPFIA4-213ENST00000601609 PRRG1O14668 218 aa17.17■□□□□ 0.34
PPFIA4-213ENST00000601609 PPEF2O14830 753 aa17.17■□□□□ 0.34
PPFIA4-213ENST00000601609 CLIC2O15247 247 aa17.17■□□□□ 0.34
PPFIA4-213ENST00000601609 C1RP00736 705 aa17.17■□□□□ 0.34
PPFIA4-213ENST00000601609 TMEM191BP0C7N4 346 aa17.17■□□□□ 0.34
PPFIA4-213ENST00000601609 CYP2J2P51589 502 aa17.17■□□□□ 0.34
PPFIA4-213ENST00000601609 ROR1Q01973 937 aa17.17■□□□□ 0.34
PPFIA4-213ENST00000601609 KMT5BQ4FZB7 885 aa17.17■□□□□ 0.34
PPFIA4-213ENST00000601609 RSPO2Q6UXX9 243 aaPredicted RBP17.17■□□□□ 0.34
PPFIA4-213ENST00000601609 EPM2AIP1Q7L775 607 aaPredicted RBP17.17■□□□□ 0.34
PPFIA4-213ENST00000601609 EFCAB13Q8IY85 973 aa17.17■□□□□ 0.34
PPFIA4-213ENST00000601609 ZNF507Q8TCN5 953 aa17.17■□□□□ 0.34
PPFIA4-213ENST00000601609 CACTINQ8WUQ7 758 aaKnown RBP17.17■□□□□ 0.34
PPFIA4-213ENST00000601609 SCFD1Q8WVM8 642 aa17.17■□□□□ 0.34
PPFIA4-213ENST00000601609 ZNF560Q96MR9 790 aa17.17■□□□□ 0.34
PPFIA4-213ENST00000601609 PRKD2Q9BZL6 878 aa17.17■□□□□ 0.34
PPFIA4-213ENST00000601609 GOLPH3LQ9H4A5 285 aa17.17■□□□□ 0.34
PPFIA4-213ENST00000601609 FBXL5Q9UKA1 691 aa17.17■□□□□ 0.34
PPFIA4-213ENST00000601609 CLUHO75153 1309 aa17.17■□□□□ 0.34
PPFIA4-213ENST00000601609 C2orf16Q68DN1 1984 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms