RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 CERS4Q9HA82 394 aa21.6■■□□□ 1.05
SHKBP1-222ENST00000600320 TMEM8AQ9HCN3 771 aa21.6■■□□□ 1.05
SHKBP1-222ENST00000600320 ITGA11Q9UKX5 1188 aa21.6■■□□□ 1.05
SHKBP1-222ENST00000600320 MTUS1Q9ULD2 1270 aa21.6■■□□□ 1.05
SHKBP1-222ENST00000600320 AGAP1Q9UPQ3 857 aa21.6■■□□□ 1.05
SHKBP1-222ENST00000600320 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.6■■□□□ 1.05
SHKBP1-222ENST00000600320 TRIOBPQ9H2D6 2365 aa21.59■■□□□ 1.05
SHKBP1-222ENST00000600320 LRRN2O75325 713 aa21.59■■□□□ 1.05
SHKBP1-222ENST00000600320 B3GAT3O94766 335 aa21.59■■□□□ 1.05
SHKBP1-222ENST00000600320 KRT19P08727 400 aa21.59■■□□□ 1.05
SHKBP1-222ENST00000600320 ALDH7A1P49419 539 aaKnown RBP21.59■■□□□ 1.05
SHKBP1-222ENST00000600320 KRT31Q15323 416 aa21.59■■□□□ 1.05
SHKBP1-222ENST00000600320 MAN2A1Q16706 1144 aa21.59■■□□□ 1.05
SHKBP1-222ENST00000600320 DCLRE1AQ6PJP8 1040 aa21.59■■□□□ 1.05
SHKBP1-222ENST00000600320 APTXQ7Z2E3 356 aaKnown RBP21.59■■□□□ 1.05
SHKBP1-222ENST00000600320 TGS1Q96RS0 853 aaKnown RBP21.59■■□□□ 1.05
SHKBP1-222ENST00000600320 TUBGCP2Q9BSJ2 902 aa21.59■■□□□ 1.05
SHKBP1-222ENST00000600320 COLEC11Q9BWP8 271 aa21.59■■□□□ 1.05
SHKBP1-222ENST00000600320 AAASQ9NRG9 546 aa21.59■■□□□ 1.05
SHKBP1-222ENST00000600320 LIMA1Q9UHB6 759 aaKnown RBP21.59■■□□□ 1.05
SHKBP1-222ENST00000600320 SCN1AP35498 2009 aa21.58■■□□□ 1.05
SHKBP1-222ENST00000600320 TMEM189-UBE2V1I3L0A0 370 aa21.58■■□□□ 1.05
SHKBP1-222ENST00000600320 SPTLC1O15269 473 aa21.58■■□□□ 1.05
SHKBP1-222ENST00000600320 STX10O60499 249 aa21.58■■□□□ 1.05
SHKBP1-222ENST00000600320 PHACTR2O75167 634 aa21.58■■□□□ 1.05
SHKBP1-222ENST00000600320 BRCC3P46736 316 aa21.58■■□□□ 1.05
SHKBP1-222ENST00000600320 FMO5P49326 533 aa21.58■■□□□ 1.05
SHKBP1-222ENST00000600320 MXI1P50539 228 aa21.58■■□□□ 1.05
SHKBP1-222ENST00000600320 RBP5P82980 135 aa21.58■■□□□ 1.05
SHKBP1-222ENST00000600320 EPC2Q52LR7 807 aa21.58■■□□□ 1.05
SHKBP1-222ENST00000600320 MIIPQ5JXC2 388 aa21.58■■□□□ 1.05
SHKBP1-222ENST00000600320 KRT39Q6A163 491 aa21.58■■□□□ 1.05
SHKBP1-222ENST00000600320 KLHL23Q8NBE8 558 aa21.58■■□□□ 1.05
SHKBP1-222ENST00000600320 TAS1R2Q8TE23 839 aa21.58■■□□□ 1.05
SHKBP1-222ENST00000600320 SEMA4DQ92854 862 aa21.58■■□□□ 1.05
SHKBP1-222ENST00000600320 ELMO3Q96BJ8 720 aa21.58■■□□□ 1.05
SHKBP1-222ENST00000600320 IGSF21Q96ID5 467 aa21.58■■□□□ 1.05
SHKBP1-222ENST00000600320 RBSNQ9H1K0 784 aa21.58■■□□□ 1.05
SHKBP1-222ENST00000600320 SLC28A3Q9HAS3 691 aa21.58■■□□□ 1.05
SHKBP1-222ENST00000600320 SPG21Q9NZD8 308 aa21.58■■□□□ 1.05
SHKBP1-222ENST00000600320 PCDHB12Q9Y5F1 795 aa21.58■■□□□ 1.05
SHKBP1-222ENST00000600320 C5orf67F2Z3F1 127 aa21.57■■□□□ 1.04
SHKBP1-222ENST00000600320 HLA-DRAP01903 254 aa21.57■■□□□ 1.04
SHKBP1-222ENST00000600320 AFPP02771 609 aaKnown RBP21.57■■□□□ 1.04
SHKBP1-222ENST00000600320 PRKCSHP14314 528 aaPredicted RBP21.57■■□□□ 1.04
SHKBP1-222ENST00000600320 FXR1P51114 621 aaKnown RBP eCLIP21.57■■□□□ 1.04
SHKBP1-222ENST00000600320 MYL6P60660 151 aa21.57■■□□□ 1.04
SHKBP1-222ENST00000600320 VWA3BQ502W6 1294 aa21.57■■□□□ 1.04
SHKBP1-222ENST00000600320 LRCH3Q96II8 777 aa21.57■■□□□ 1.04
SHKBP1-222ENST00000600320 SAMD11Q96NU1 681 aa21.57■■□□□ 1.04
SHKBP1-222ENST00000600320 VN1R3Q9BXE9 311 aa21.57■■□□□ 1.04
SHKBP1-222ENST00000600320 RWDD3Q9Y3V2 267 aa21.57■■□□□ 1.04
SHKBP1-222ENST00000600320 EPOPA6NHQ4 379 aa21.56■■□□□ 1.04
SHKBP1-222ENST00000600320 GOLGA6L19H0YKK7 550 aa21.56■■□□□ 1.04
SHKBP1-222ENST00000600320 I3L4J1 428 aa21.56■■□□□ 1.04
SHKBP1-222ENST00000600320 FGF18O76093 207 aa21.56■■□□□ 1.04
SHKBP1-222ENST00000600320 EFEMP2O95967 443 aa21.56■■□□□ 1.04
SHKBP1-222ENST00000600320 CDK11BP21127 795 aaKnown RBP21.56■■□□□ 1.04
SHKBP1-222ENST00000600320 COPB1P53618 953 aaKnown RBP21.56■■□□□ 1.04
SHKBP1-222ENST00000600320 MYL7Q01449 175 aa21.56■■□□□ 1.04
SHKBP1-222ENST00000600320 NCOA4Q13772 614 aa21.56■■□□□ 1.04
SHKBP1-222ENST00000600320 TIGD5Q53EQ6 642 aa21.56■■□□□ 1.04
SHKBP1-222ENST00000600320 LRRC52Q8N7C0 313 aa21.56■■□□□ 1.04
SHKBP1-222ENST00000600320 ARNTL2Q8WYA1 636 aa21.56■■□□□ 1.04
SHKBP1-222ENST00000600320 PLVAPQ9BX97 442 aa21.56■■□□□ 1.04
SHKBP1-222ENST00000600320 XYLT2Q9H1B5 865 aa21.56■■□□□ 1.04
SHKBP1-222ENST00000600320 VPS16Q9H269 839 aa21.56■■□□□ 1.04
SHKBP1-222ENST00000600320 ADAM28Q9UKQ2 775 aa21.56■■□□□ 1.04
SHKBP1-222ENST00000600320 TADA2AO75478 443 aa21.55■■□□□ 1.04
SHKBP1-222ENST00000600320 PPM1AP35813 382 aa21.55■■□□□ 1.04
SHKBP1-222ENST00000600320 PIK3CAP42336 1068 aa21.55■■□□□ 1.04
SHKBP1-222ENST00000600320 AARSP49588 968 aaKnown RBP eCLIP21.55■■□□□ 1.04
SHKBP1-222ENST00000600320 TAF6P49848 677 aa21.55■■□□□ 1.04
SHKBP1-222ENST00000600320 LILRA4P59901 499 aa21.55■■□□□ 1.04
SHKBP1-222ENST00000600320 PLCB3Q01970 1234 aa21.55■■□□□ 1.04
SHKBP1-222ENST00000600320 TRPC3Q13507 836 aa21.55■■□□□ 1.04
SHKBP1-222ENST00000600320 FUT10Q6P4F1 479 aa21.55■■□□□ 1.04
SHKBP1-222ENST00000600320 HPDLQ96IR7 371 aa21.55■■□□□ 1.04
SHKBP1-222ENST00000600320 ZNF560Q96MR9 790 aa21.55■■□□□ 1.04
SHKBP1-222ENST00000600320 ANP32EQ9BTT0 268 aa21.55■■□□□ 1.04
SHKBP1-222ENST00000600320 PI4K2AQ9BTU6 479 aa21.55■■□□□ 1.04
SHKBP1-222ENST00000600320 GPR62Q9BZJ7 368 aa21.55■■□□□ 1.04
SHKBP1-222ENST00000600320 NDST4Q9H3R1 872 aa21.55■■□□□ 1.04
SHKBP1-222ENST00000600320 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.55■■□□□ 1.04
SHKBP1-222ENST00000600320 COQ4Q9Y3A0 265 aa21.55■■□□□ 1.04
SHKBP1-222ENST00000600320 NUB1Q9Y5A7 615 aa21.55■■□□□ 1.04
SHKBP1-222ENST00000600320 PLXNA4Q9HCM2 1894 aa21.54■■□□□ 1.04
SHKBP1-222ENST00000600320 N4BP1O75113 896 aaKnown RBP21.54■■□□□ 1.04
SHKBP1-222ENST00000600320 RB1P06400 928 aa21.54■■□□□ 1.04
SHKBP1-222ENST00000600320 SPOPLQ6IQ16 392 aa21.54■■□□□ 1.04
SHKBP1-222ENST00000600320 TAS1R1Q7RTX1 841 aa21.54■■□□□ 1.04
SHKBP1-222ENST00000600320 RNF168Q8IYW5 571 aaPredicted RBP21.54■■□□□ 1.04
SHKBP1-222ENST00000600320 FBXO22Q8NEZ5 403 aa21.54■■□□□ 1.04
SHKBP1-222ENST00000600320 TMEM169Q96HH4 297 aa21.54■■□□□ 1.04
SHKBP1-222ENST00000600320 TTYH1Q9H313 450 aaPredicted RBP21.54■■□□□ 1.04
SHKBP1-222ENST00000600320 ALG13Q9NP73 1137 aaKnown RBP21.54■■□□□ 1.04
SHKBP1-222ENST00000600320 CARNS1A5YM72 827 aa21.53■■□□□ 1.04
SHKBP1-222ENST00000600320 LRRC10BA6NIK2 292 aa21.53■■□□□ 1.04
SHKBP1-222ENST00000600320 RFXAPO00287 272 aa21.53■■□□□ 1.04
SHKBP1-222ENST00000600320 GRM6O15303 877 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms