RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 FBXL5Q9UKA1 691 aa17.2■□□□□ 0.34
VRK3-221ENST00000600284 PCDHB8Q9UN66 801 aa17.2■□□□□ 0.34
VRK3-221ENST00000600284 MTMR6Q9Y217 621 aa17.2■□□□□ 0.34
VRK3-221ENST00000600284 WDR27A2RRH5 827 aa17.19■□□□□ 0.34
VRK3-221ENST00000600284 STX6O43752 255 aa17.19■□□□□ 0.34
VRK3-221ENST00000600284 NARSO43776 548 aaKnown RBP17.19■□□□□ 0.34
VRK3-221ENST00000600284 NPR3P17342 541 aa17.19■□□□□ 0.34
VRK3-221ENST00000600284 NMT1P30419 496 aaKnown RBP17.19■□□□□ 0.34
VRK3-221ENST00000600284 NTHL1P78549 312 aa17.19■□□□□ 0.34
VRK3-221ENST00000600284 ENOX2Q16206 610 aaKnown RBP17.19■□□□□ 0.34
VRK3-221ENST00000600284 CTXN3Q4LDR2 81 aa17.19■□□□□ 0.34
VRK3-221ENST00000600284 PABPC1LQ4VXU2 614 aaKnown RBP17.19■□□□□ 0.34
VRK3-221ENST00000600284 FAM173BQ6P4H8 233 aa17.19■□□□□ 0.34
VRK3-221ENST00000600284 MTSS1LQ765P7 747 aa17.19■□□□□ 0.34
VRK3-221ENST00000600284 SV2BQ7L1I2 683 aa17.19■□□□□ 0.34
VRK3-221ENST00000600284 ZNF720Q7Z2F6 126 aa17.19■□□□□ 0.34
VRK3-221ENST00000600284 TMEM105Q8N8V8 129 aa17.19■□□□□ 0.34
VRK3-221ENST00000600284 DDX12PQ92771 950 aa17.19■□□□□ 0.34
VRK3-221ENST00000600284 FGF13Q92913 245 aa17.19■□□□□ 0.34
VRK3-221ENST00000600284 HVCN1Q96D96 273 aa17.19■□□□□ 0.34
VRK3-221ENST00000600284 RTP3Q9BQQ7 232 aa17.19■□□□□ 0.34
VRK3-221ENST00000600284 MSTO1Q9BUK6 570 aa17.19■□□□□ 0.34
VRK3-221ENST00000600284 CPSF3Q9UKF6 684 aaKnown RBP17.19■□□□□ 0.34
VRK3-221ENST00000600284 DERAQ9Y315 318 aa17.19■□□□□ 0.34
VRK3-221ENST00000600284 STYXL1Q9Y6J8 313 aa17.19■□□□□ 0.34
VRK3-221ENST00000600284 PIEZO1Q92508 2521 aa17.19■□□□□ 0.34
VRK3-221ENST00000600284 DOCK8Q8NF50 2099 aa17.19■□□□□ 0.34
VRK3-221ENST00000600284 OAZ2O95190 189 aa17.18■□□□□ 0.34
VRK3-221ENST00000600284 LRG1P02750 347 aa17.18■□□□□ 0.34
VRK3-221ENST00000600284 PDIA4P13667 645 aaKnown RBP17.18■□□□□ 0.34
VRK3-221ENST00000600284 PTPN2P17706 415 aa17.18■□□□□ 0.34
VRK3-221ENST00000600284 AOC1P19801 751 aa17.18■□□□□ 0.34
VRK3-221ENST00000600284 AARSP49588 968 aaKnown RBP eCLIP17.18■□□□□ 0.34
VRK3-221ENST00000600284 SPATA1Q5VX52 437 aa17.18■□□□□ 0.34
VRK3-221ENST00000600284 SLC39A4Q6P5W5 647 aa17.18■□□□□ 0.34
VRK3-221ENST00000600284 CCDC73Q6ZRK6 1079 aa17.18■□□□□ 0.34
VRK3-221ENST00000600284 SIX5Q8N196 739 aa17.18■□□□□ 0.34
VRK3-221ENST00000600284 FLCNQ8NFG4 579 aa17.18■□□□□ 0.34
VRK3-221ENST00000600284 CLIC6Q96NY7 704 aa17.18■□□□□ 0.34
VRK3-221ENST00000600284 USP28Q96RU2 1077 aa17.18■□□□□ 0.34
VRK3-221ENST00000600284 ASB7Q9H672 318 aa17.18■□□□□ 0.34
VRK3-221ENST00000600284 SLC2A4RGQ9NR83 387 aa17.18■□□□□ 0.34
VRK3-221ENST00000600284 NUMBLQ9Y6R0 609 aa17.18■□□□□ 0.34
VRK3-221ENST00000600284 PRRG1O14668 218 aa17.17■□□□□ 0.34
VRK3-221ENST00000600284 CFHP08603 1231 aa17.17■□□□□ 0.34
VRK3-221ENST00000600284 GAP43P17677 238 aa17.17■□□□□ 0.34
VRK3-221ENST00000600284 ARPP19P56211 112 aa17.17■□□□□ 0.34
VRK3-221ENST00000600284 CEBPZQ03701 1054 aaKnown RBP17.17■□□□□ 0.34
VRK3-221ENST00000600284 YWHAHQ04917 246 aaPredicted RBP17.17■□□□□ 0.34
VRK3-221ENST00000600284 SPAG1Q07617 926 aa17.17■□□□□ 0.34
VRK3-221ENST00000600284 POSTNQ15063 836 aa17.17■□□□□ 0.34
VRK3-221ENST00000600284 ZC2HC1CQ53FD0 456 aaPredicted RBP17.17■□□□□ 0.34
VRK3-221ENST00000600284 ZBTB41Q5SVQ8 909 aa17.17■□□□□ 0.34
VRK3-221ENST00000600284 CWF19L1Q69YN2 538 aaKnown RBP17.17■□□□□ 0.34
VRK3-221ENST00000600284 ADALQ6DHV7 355 aa17.17■□□□□ 0.34
VRK3-221ENST00000600284 DYMQ7RTS9 669 aa17.17■□□□□ 0.34
VRK3-221ENST00000600284 BEST2Q8NFU1 509 aa17.17■□□□□ 0.34
VRK3-221ENST00000600284 ITFG1Q8TB96 612 aa17.17■□□□□ 0.34
VRK3-221ENST00000600284 SNX21Q969T3 373 aa17.17■□□□□ 0.34
VRK3-221ENST00000600284 DNAJC19Q96DA6 116 aa17.17■□□□□ 0.34
VRK3-221ENST00000600284 STRA6Q9BX79 667 aa17.17■□□□□ 0.34
VRK3-221ENST00000600284 CYP4F11Q9HBI6 524 aa17.17■□□□□ 0.34
VRK3-221ENST00000600284 HCFC1R1Q9NWW0 138 aa17.17■□□□□ 0.34
VRK3-221ENST00000600284 GDE1Q9NZC3 331 aa17.17■□□□□ 0.34
VRK3-221ENST00000600284 AFF4Q9UHB7 1163 aaKnown RBP17.17■□□□□ 0.34
VRK3-221ENST00000600284 PDCD11Q14690 1871 aaKnown RBP17.16■□□□□ 0.34
VRK3-221ENST00000600284 MYMKA6NI61 221 aa17.16■□□□□ 0.34
VRK3-221ENST00000600284 ANKRD63C9JTQ0 380 aa17.16■□□□□ 0.34
VRK3-221ENST00000600284 PPP1R37O75864 691 aa17.16■□□□□ 0.34
VRK3-221ENST00000600284 MICAL2O94851 1124 aa17.16■□□□□ 0.34
VRK3-221ENST00000600284 RHOP08100 348 aa17.16■□□□□ 0.34
VRK3-221ENST00000600284 TYMPP19971 482 aa17.16■□□□□ 0.34
VRK3-221ENST00000600284 NASPP49321 788 aaPredicted RBP17.16■□□□□ 0.34
VRK3-221ENST00000600284 PARM1Q6UWI2 310 aa17.16■□□□□ 0.34
VRK3-221ENST00000600284 SFR1Q86XK3 245 aa17.16■□□□□ 0.34
VRK3-221ENST00000600284 FGF14Q92915 247 aa17.16■□□□□ 0.34
VRK3-221ENST00000600284 AGO2Q9UKV8 859 aaKnown RBP17.16■□□□□ 0.34
VRK3-221ENST00000600284 EXOC7Q9UPT5 735 aa17.16■□□□□ 0.34
VRK3-221ENST00000600284 MRPS23Q9Y3D9 190 aaKnown RBP17.16■□□□□ 0.34
VRK3-221ENST00000600284 KRBA1A5PL33 1030 aa17.15■□□□□ 0.34
VRK3-221ENST00000600284 OR6C75A6NL08 312 aa17.15■□□□□ 0.34
VRK3-221ENST00000600284 ZNF197O14709 1029 aa17.15■□□□□ 0.34
VRK3-221ENST00000600284 SEC24AO95486 1093 aa17.15■□□□□ 0.34
VRK3-221ENST00000600284 JADE1Q6IE81 842 aa17.15■□□□□ 0.34
VRK3-221ENST00000600284 PHLDB3Q6NSJ2 640 aa17.15■□□□□ 0.34
VRK3-221ENST00000600284 DSTYKQ6XUX3 929 aa17.15■□□□□ 0.34
VRK3-221ENST00000600284 USP37Q86T82 979 aa17.15■□□□□ 0.34
VRK3-221ENST00000600284 NPAS3Q8IXF0 933 aa17.15■□□□□ 0.34
VRK3-221ENST00000600284 ELMOD1Q8N336 334 aa17.15■□□□□ 0.34
VRK3-221ENST00000600284 LINC00301Q8NCQ3 95 aa17.15■□□□□ 0.34
VRK3-221ENST00000600284 GPR152Q8TDT2 470 aa17.15■□□□□ 0.34
VRK3-221ENST00000600284 ATOH1Q92858 354 aaPredicted RBP17.15■□□□□ 0.34
VRK3-221ENST00000600284 FAM212AQ96EL1 285 aa17.15■□□□□ 0.34
VRK3-221ENST00000600284 MRPL44Q9H9J2 332 aaKnown RBP17.15■□□□□ 0.34
VRK3-221ENST00000600284 OLFML3Q9NRN5 406 aa17.15■□□□□ 0.34
VRK3-221ENST00000600284 C2CD2Q9Y426 696 aa17.15■□□□□ 0.34
VRK3-221ENST00000600284 PCDHB13Q9Y5F0 798 aa17.15■□□□□ 0.34
VRK3-221ENST00000600284 INSL5Q9Y5Q6 135 aa17.15■□□□□ 0.34
VRK3-221ENST00000600284 ANO9A1A5B4 782 aa17.14■□□□□ 0.33
VRK3-221ENST00000600284 H0Y858 1186 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms