RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 NUBP1P53384 320 aa25.02■■□□□ 1.6
SSBP4-205ENST00000598159 POU5F1Q01860 360 aaKnown RBP25.02■■□□□ 1.6
SSBP4-205ENST00000598159 ROR1Q01973 937 aa25.02■■□□□ 1.6
SSBP4-205ENST00000598159 POSTNQ15063 836 aa25.02■■□□□ 1.6
SSBP4-205ENST00000598159 CTXN3Q4LDR2 81 aa25.02■■□□□ 1.6
SSBP4-205ENST00000598159 ZBTB41Q5SVQ8 909 aa25.02■■□□□ 1.6
SSBP4-205ENST00000598159 ADALQ6DHV7 355 aa25.02■■□□□ 1.6
SSBP4-205ENST00000598159 SLC44A3Q8N4M1 653 aa25.02■■□□□ 1.6
SSBP4-205ENST00000598159 MRPL44Q9H9J2 332 aaKnown RBP25.02■■□□□ 1.6
SSBP4-205ENST00000598159 FBXL5Q9UKA1 691 aa25.02■■□□□ 1.6
SSBP4-205ENST00000598159 M0QZQ0 153 aa25.01■■□□□ 1.59
SSBP4-205ENST00000598159 SPTLC2O15270 562 aa25.01■■□□□ 1.59
SSBP4-205ENST00000598159 PPP6R2O75170 966 aa25.01■■□□□ 1.59
SSBP4-205ENST00000598159 ATF2P15336 505 aa25.01■■□□□ 1.59
SSBP4-205ENST00000598159 VCPP55072 806 aaKnown RBP25.01■■□□□ 1.59
SSBP4-205ENST00000598159 SPATA1Q5VX52 437 aa25.01■■□□□ 1.59
SSBP4-205ENST00000598159 TPGS2Q68CL5 300 aa25.01■■□□□ 1.59
SSBP4-205ENST00000598159 RSAD2Q8WXG1 361 aa25.01■■□□□ 1.59
SSBP4-205ENST00000598159 FAM212AQ96EL1 285 aa25.01■■□□□ 1.59
SSBP4-205ENST00000598159 STRA6Q9BX79 667 aa25.01■■□□□ 1.59
SSBP4-205ENST00000598159 OXCT2Q9BYC2 517 aaPredicted RBP25.01■■□□□ 1.59
SSBP4-205ENST00000598159 TFIP11Q9UBB9 837 aaKnown RBP25.01■■□□□ 1.59
SSBP4-205ENST00000598159 CDH7Q9ULB5 785 aa25.01■■□□□ 1.59
SSBP4-205ENST00000598159 MAFFQ9ULX9 164 aa25.01■■□□□ 1.59
SSBP4-205ENST00000598159 EXOC7Q9UPT5 735 aa25.01■■□□□ 1.59
SSBP4-205ENST00000598159 DERAQ9Y315 318 aa25.01■■□□□ 1.59
SSBP4-205ENST00000598159 ZDBF2Q9HCK1 2354 aa25■■□□□ 1.59
SSBP4-205ENST00000598159 ARHGEF37A1IGU5 675 aa25■■□□□ 1.59
SSBP4-205ENST00000598159 WDR27A2RRH5 827 aa25■■□□□ 1.59
SSBP4-205ENST00000598159 ANHXE9PGG2 379 aa25■■□□□ 1.59
SSBP4-205ENST00000598159 HSP90AA1P07900 732 aaKnown RBP25■■□□□ 1.59
SSBP4-205ENST00000598159 PAX3P23760 479 aa25■■□□□ 1.59
SSBP4-205ENST00000598159 HOXD11P31277 338 aaPredicted RBP25■■□□□ 1.59
SSBP4-205ENST00000598159 ARPP19P56211 112 aa25■■□□□ 1.59
SSBP4-205ENST00000598159 NHLH1Q02575 133 aa25■■□□□ 1.59
SSBP4-205ENST00000598159 ZNF280DQ6N043 979 aa25■■□□□ 1.59
SSBP4-205ENST00000598159 BEST2Q8NFU1 509 aa25■■□□□ 1.59
SSBP4-205ENST00000598159 MFSD1Q9H3U5 465 aa25■■□□□ 1.59
SSBP4-205ENST00000598159 ASB7Q9H672 318 aa25■■□□□ 1.59
SSBP4-205ENST00000598159 DNMT3BQ9UBC3 853 aaKnown RBP25■■□□□ 1.59
SSBP4-205ENST00000598159 AGO2Q9UKV8 859 aaKnown RBP25■■□□□ 1.59
SSBP4-205ENST00000598159 KCNH3Q9ULD8 1083 aa25■■□□□ 1.59
SSBP4-205ENST00000598159 PCDHB13Q9Y5F0 798 aa25■■□□□ 1.59
SSBP4-205ENST00000598159 PPP1R37O75864 691 aa24.99■■□□□ 1.59
SSBP4-205ENST00000598159 AARSP49588 968 aaKnown RBP eCLIP24.99■■□□□ 1.594e-6■■■■■ 38
SSBP4-205ENST00000598159 ACOT2P49753 483 aa24.99■■□□□ 1.59
SSBP4-205ENST00000598159 NTHL1P78549 312 aa24.99■■□□□ 1.59
SSBP4-205ENST00000598159 JADE1Q6IE81 842 aa24.99■■□□□ 1.59
SSBP4-205ENST00000598159 TCEAL8Q8IYN2 117 aa24.99■■□□□ 1.59
SSBP4-205ENST00000598159 ACCSQ96QU6 501 aa24.99■■□□□ 1.59
SSBP4-205ENST00000598159 OLFML3Q9NRN5 406 aa24.99■■□□□ 1.59
SSBP4-205ENST00000598159 WNT16Q9UBV4 365 aa24.99■■□□□ 1.59
SSBP4-205ENST00000598159 FBXL21Q9UKT6 434 aa24.99■■□□□ 1.59
SSBP4-205ENST00000598159 KMT2EQ8IZD2 1858 aa24.98■■□□□ 1.59
SSBP4-205ENST00000598159 A0A087X0B3 334 aa24.98■■□□□ 1.59
SSBP4-205ENST00000598159 PRRG1O14668 218 aa24.98■■□□□ 1.59
SSBP4-205ENST00000598159 OAZ2O95190 189 aa24.98■■□□□ 1.59
SSBP4-205ENST00000598159 YEATS4O95619 227 aa24.98■■□□□ 1.59
SSBP4-205ENST00000598159 LRG1P02750 347 aa24.98■■□□□ 1.59
SSBP4-205ENST00000598159 IDEP14735 1019 aa24.98■■□□□ 1.59
SSBP4-205ENST00000598159 PTPN2P17706 415 aa24.98■■□□□ 1.59
SSBP4-205ENST00000598159 CLCN5P51795 746 aa24.98■■□□□ 1.59
SSBP4-205ENST00000598159 PTPN5P54829 565 aa24.98■■□□□ 1.59
SSBP4-205ENST00000598159 YWHAHQ04917 246 aaPredicted RBP24.98■■□□□ 1.59
SSBP4-205ENST00000598159 PABPC1LQ4VXU2 614 aaKnown RBP24.98■■□□□ 1.59
SSBP4-205ENST00000598159 ASTLQ6HA08 431 aaPredicted RBP24.98■■□□□ 1.59
SSBP4-205ENST00000598159 DSTYKQ6XUX3 929 aa24.98■■□□□ 1.59
SSBP4-205ENST00000598159 PRSS33Q8NF86 280 aa24.98■■□□□ 1.59
SSBP4-205ENST00000598159 POMGNT1Q8WZA1 660 aa24.98■■□□□ 1.59
SSBP4-205ENST00000598159 LRRC27Q9C0I9 530 aa24.98■■□□□ 1.59
SSBP4-205ENST00000598159 CYP4F11Q9HBI6 524 aa24.98■■□□□ 1.59
SSBP4-205ENST00000598159 ALCAMQ13740 583 aa24.97■■□□□ 1.59
SSBP4-205ENST00000598159 L1TD1Q5T7N2 865 aaKnown RBP24.97■■□□□ 1.59
SSBP4-205ENST00000598159 PDILTQ8N807 584 aa24.97■■□□□ 1.59
SSBP4-205ENST00000598159 FGF13Q92913 245 aa24.97■■□□□ 1.59
SSBP4-205ENST00000598159 IRF2BPLQ9H1B7 796 aa24.97■■□□□ 1.59
SSBP4-205ENST00000598159 AVENQ9NQS1 362 aaPredicted RBP24.97■■□□□ 1.59
SSBP4-205ENST00000598159 PANK4Q9NVE7 773 aa24.97■■□□□ 1.59
SSBP4-205ENST00000598159 HCFC1R1Q9NWW0 138 aa24.97■■□□□ 1.59
SSBP4-205ENST00000598159 TBC1D7Q9P0N9 293 aa24.97■■□□□ 1.59
SSBP4-205ENST00000598159 AFF4Q9UHB7 1163 aaKnown RBP24.97■■□□□ 1.59
SSBP4-205ENST00000598159 FRMD3A2A2Y4 597 aa24.96■■□□□ 1.59
SSBP4-205ENST00000598159 TISP43B9A030 160 aa24.96■■□□□ 1.59
SSBP4-205ENST00000598159 NARSO43776 548 aaKnown RBP24.96■■□□□ 1.59
SSBP4-205ENST00000598159 GCNT3O95395 438 aa24.96■■□□□ 1.59
SSBP4-205ENST00000598159 SRFP11831 508 aa24.96■■□□□ 1.59
SSBP4-205ENST00000598159 GUCY2FP51841 1108 aa24.96■■□□□ 1.59
SSBP4-205ENST00000598159 LILRA4P59901 499 aa24.96■■□□□ 1.59
SSBP4-205ENST00000598159 HTR4Q13639 388 aa24.96■■□□□ 1.59
SSBP4-205ENST00000598159 TMEM132DQ14C87 1099 aa24.96■■□□□ 1.59
SSBP4-205ENST00000598159 USP37Q86T82 979 aa24.96■■□□□ 1.59
SSBP4-205ENST00000598159 TMEM130Q8N3G9 435 aa24.96■■□□□ 1.59
SSBP4-205ENST00000598159 ITFG1Q8TB96 612 aa24.96■■□□□ 1.59
SSBP4-205ENST00000598159 CUEDC2Q9H467 287 aa24.96■■□□□ 1.59
SSBP4-205ENST00000598159 C2CD2Q9Y426 696 aa24.96■■□□□ 1.59
SSBP4-205ENST00000598159 NOTCH4Q99466 2003 aa24.96■■□□□ 1.59
SSBP4-205ENST00000598159 MYH15Q9Y2K3 1946 aa24.96■■□□□ 1.59
SSBP4-205ENST00000598159 PIRO00625 290 aa24.95■■□□□ 1.58
SSBP4-205ENST00000598159 CUTAO60888 179 aa24.95■■□□□ 1.58
SSBP4-205ENST00000598159 SEC24AO95486 1093 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms