RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 MTIF2P46199 727 aaKnown RBP23.86■■□□□ 1.41
CHMP2A-204ENST00000597848 PPP3CAQ08209 521 aa23.86■■□□□ 1.41
CHMP2A-204ENST00000597848 TRPC3Q13507 836 aa23.86■■□□□ 1.41
CHMP2A-204ENST00000597848 IRF2BP1Q8IU81 584 aa23.86■■□□□ 1.41
CHMP2A-204ENST00000597848 C3orf58Q8NDZ4 430 aa23.86■■□□□ 1.41
CHMP2A-204ENST00000597848 TSPY26PQ9H489 355 aa23.86■■□□□ 1.41
CHMP2A-204ENST00000597848 FANCLQ9NW38 375 aa23.86■■□□□ 1.41
CHMP2A-204ENST00000597848 BECN2A8MW95 431 aa23.85■■□□□ 1.41
CHMP2A-204ENST00000597848 TMEM189-UBE2V1I3L0A0 370 aa23.85■■□□□ 1.41
CHMP2A-204ENST00000597848 GRM6O15303 877 aa23.85■■□□□ 1.41
CHMP2A-204ENST00000597848 C4BPAP04003 597 aaKnown RBP23.85■■□□□ 1.41
CHMP2A-204ENST00000597848 GTF2H1P32780 548 aa23.85■■□□□ 1.41
CHMP2A-204ENST00000597848 MARSP56192 900 aaKnown RBP23.85■■□□□ 1.41
CHMP2A-204ENST00000597848 GRIN2CQ14957 1233 aa23.85■■□□□ 1.41
CHMP2A-204ENST00000597848 TDRD10Q5VZ19 366 aaKnown RBP23.85■■□□□ 1.41
CHMP2A-204ENST00000597848 LRSAM1Q6UWE0 723 aa23.85■■□□□ 1.41
CHMP2A-204ENST00000597848 SV2AQ7L0J3 742 aa23.85■■□□□ 1.41
CHMP2A-204ENST00000597848 DDX53Q86TM3 631 aaKnown RBP23.85■■□□□ 1.41
CHMP2A-204ENST00000597848 SPPL3Q8TCT6 385 aa23.85■■□□□ 1.41
CHMP2A-204ENST00000597848 GDPD5Q8WTR4 605 aa23.85■■□□□ 1.41
CHMP2A-204ENST00000597848 SLC35C1Q96A29 364 aa23.85■■□□□ 1.41
CHMP2A-204ENST00000597848 PRDM12Q9H4Q4 367 aa23.85■■□□□ 1.41
CHMP2A-204ENST00000597848 SIX4Q9UIU6 781 aa23.85■■□□□ 1.41
CHMP2A-204ENST00000597848 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.85■■□□□ 1.41
CHMP2A-204ENST00000597848 KCNJ18B7U540 433 aa23.84■■□□□ 1.41
CHMP2A-204ENST00000597848 TRAPPC3O43617 180 aa23.84■■□□□ 1.41
CHMP2A-204ENST00000597848 CLSTN1O94985 981 aa23.84■■□□□ 1.41
CHMP2A-204ENST00000597848 CSPG5O95196 566 aa23.84■■□□□ 1.41
CHMP2A-204ENST00000597848 CAVIN2O95810 425 aa23.84■■□□□ 1.41
CHMP2A-204ENST00000597848 BRCC3P46736 316 aa23.84■■□□□ 1.41
CHMP2A-204ENST00000597848 MCCD1P59942 119 aaPredicted RBP23.84■■□□□ 1.41
CHMP2A-204ENST00000597848 KCNJ12Q14500 433 aa23.84■■□□□ 1.41
CHMP2A-204ENST00000597848 SCARA3Q6AZY7 606 aa23.84■■□□□ 1.41
CHMP2A-204ENST00000597848 GPR153Q6NV75 609 aa23.84■■□□□ 1.41
CHMP2A-204ENST00000597848 FUT10Q6P4F1 479 aa23.84■■□□□ 1.41
CHMP2A-204ENST00000597848 CD300LGQ6UXG3 332 aa23.84■■□□□ 1.41
CHMP2A-204ENST00000597848 TRIM59Q8IWR1 403 aa23.84■■□□□ 1.41
CHMP2A-204ENST00000597848 POF1BQ8WVV4 589 aa23.84■■□□□ 1.41
CHMP2A-204ENST00000597848 ZNF560Q96MR9 790 aa23.84■■□□□ 1.41
CHMP2A-204ENST00000597848 GPR62Q9BZJ7 368 aa23.84■■□□□ 1.41
CHMP2A-204ENST00000597848 TMEM8AQ9HCN3 771 aa23.84■■□□□ 1.41
CHMP2A-204ENST00000597848 SF3B1O75533 1304 aaKnown RBP eCLIP23.84■■□□□ 1.41
CHMP2A-204ENST00000597848 PDCD11Q14690 1871 aaKnown RBP23.83■■□□□ 1.41
CHMP2A-204ENST00000597848 KIAA1671Q9BY89 1806 aa23.83■■□□□ 1.41
CHMP2A-204ENST00000597848 I3L4J1 428 aa23.83■■□□□ 1.41
CHMP2A-204ENST00000597848 CST3P01034 146 aaPredicted RBP23.83■■□□□ 1.41
CHMP2A-204ENST00000597848 PNPLA4P41247 253 aa23.83■■□□□ 1.41
CHMP2A-204ENST00000597848 TAF6P49848 677 aa23.83■■□□□ 1.41
CHMP2A-204ENST00000597848 FXR1P51114 621 aaKnown RBP eCLIP23.83■■□□□ 1.41
CHMP2A-204ENST00000597848 LILRA4P59901 499 aa23.83■■□□□ 1.41
CHMP2A-204ENST00000597848 UBE3AQ05086 875 aa23.83■■□□□ 1.41
CHMP2A-204ENST00000597848 ELAVL2Q12926 359 aaKnown RBP23.83■■□□□ 1.41
CHMP2A-204ENST00000597848 MYO1EQ12965 1108 aa23.83■■□□□ 1.41
CHMP2A-204ENST00000597848 ZACNQ401N2 412 aa23.83■■□□□ 1.41
CHMP2A-204ENST00000597848 KRT39Q6A163 491 aa23.83■■□□□ 1.41
CHMP2A-204ENST00000597848 DSTYKQ6XUX3 929 aa23.83■■□□□ 1.41
CHMP2A-204ENST00000597848 DHX40Q8IX18 779 aaKnown RBP23.83■■□□□ 1.41
CHMP2A-204ENST00000597848 VPS52Q8N1B4 723 aa23.83■■□□□ 1.41
CHMP2A-204ENST00000597848 CBX8Q9HC52 389 aa23.83■■□□□ 1.41
CHMP2A-204ENST00000597848 LZTS1Q9Y250 596 aa23.83■■□□□ 1.41
CHMP2A-204ENST00000597848 NLRC5Q86WI3 1866 aa23.82■■□□□ 1.4
CHMP2A-204ENST00000597848 CDK11BP21127 795 aaKnown RBP23.82■■□□□ 1.4
CHMP2A-204ENST00000597848 MXI1P50539 228 aa23.82■■□□□ 1.4
CHMP2A-204ENST00000597848 NCOA4Q13772 614 aa23.82■■□□□ 1.4
CHMP2A-204ENST00000597848 NCAPHQ15003 741 aa23.82■■□□□ 1.4
CHMP2A-204ENST00000597848 SV2CQ496J9 727 aa23.82■■□□□ 1.4
CHMP2A-204ENST00000597848 TIGD5Q53EQ6 642 aa23.82■■□□□ 1.4
CHMP2A-204ENST00000597848 FAM171A1Q5VUB5 890 aa23.82■■□□□ 1.4
CHMP2A-204ENST00000597848 Q7L0L9 218 aa23.82■■□□□ 1.4
CHMP2A-204ENST00000597848 TAS1R1Q7RTX1 841 aa23.82■■□□□ 1.4
CHMP2A-204ENST00000597848 LRRC52Q8N7C0 313 aa23.82■■□□□ 1.4
CHMP2A-204ENST00000597848 CXorf38Q8TB03 319 aa23.82■■□□□ 1.4
CHMP2A-204ENST00000597848 MICAL1Q8TDZ2 1067 aa23.82■■□□□ 1.4
CHMP2A-204ENST00000597848 HPDLQ96IR7 371 aa23.82■■□□□ 1.4
CHMP2A-204ENST00000597848 VN1R3Q9BXE9 311 aa23.82■■□□□ 1.4
CHMP2A-204ENST00000597848 STK39Q9UEW8 545 aa23.82■■□□□ 1.4
CHMP2A-204ENST00000597848 SPTLC1O15269 473 aa23.81■■□□□ 1.4
CHMP2A-204ENST00000597848 PAX3P23760 479 aa23.81■■□□□ 1.4
CHMP2A-204ENST00000597848 DNAJB1P25685 340 aa23.81■■□□□ 1.4
CHMP2A-204ENST00000597848 EEF1GP26641 437 aaKnown RBP23.81■■□□□ 1.4
CHMP2A-204ENST00000597848 CA8P35219 290 aa23.81■■□□□ 1.4
CHMP2A-204ENST00000597848 PIK3CAP42336 1068 aa23.81■■□□□ 1.4
CHMP2A-204ENST00000597848 ZNF445P59923 1031 aa23.81■■□□□ 1.4
CHMP2A-204ENST00000597848 MYL6P60660 151 aa23.81■■□□□ 1.4
CHMP2A-204ENST00000597848 KCNH2Q12809 1159 aa23.81■■□□□ 1.4
CHMP2A-204ENST00000597848 BMS1Q14692 1282 aaKnown RBP23.81■■□□□ 1.4
CHMP2A-204ENST00000597848 IQCB1Q15051 598 aa23.81■■□□□ 1.4
CHMP2A-204ENST00000597848 TCP11X2Q5H9J9 407 aa23.81■■□□□ 1.4
CHMP2A-204ENST00000597848 CDKAL1Q5VV42 579 aa23.81■■□□□ 1.4
CHMP2A-204ENST00000597848 KIAA1841Q6NSI8 718 aa23.81■■□□□ 1.4
CHMP2A-204ENST00000597848 C15orf39Q6ZRI6 1047 aa23.81■■□□□ 1.4
CHMP2A-204ENST00000597848 TMC7Q7Z402 723 aa23.81■■□□□ 1.4
CHMP2A-204ENST00000597848 CEP57Q86XR8 500 aa23.81■■□□□ 1.4
CHMP2A-204ENST00000597848 KPNA7A9QM74 516 aa23.8■■□□□ 1.4
CHMP2A-204ENST00000597848 N4BP1O75113 896 aaKnown RBP23.8■■□□□ 1.4
CHMP2A-204ENST00000597848 VNN1O95497 513 aa23.8■■□□□ 1.4
CHMP2A-204ENST00000597848 HLA-DRAP01903 254 aa23.8■■□□□ 1.4
CHMP2A-204ENST00000597848 AFPP02771 609 aaKnown RBP23.8■■□□□ 1.4
CHMP2A-204ENST00000597848 SOD2P04179 222 aa23.8■■□□□ 1.4
CHMP2A-204ENST00000597848 PRKCSHP14314 528 aaPredicted RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms