RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 OTOAQ7RTW8 1153 aa13.35□□□□□ -0.27
ZNF558-205ENST00000597304 C12orf56Q8IXR9 622 aa13.35□□□□□ -0.27
ZNF558-205ENST00000597304 DAW1Q8N136 415 aa13.35□□□□□ -0.27
ZNF558-205ENST00000597304 DDX27Q96GQ7 796 aaKnown RBP13.35□□□□□ -0.27
ZNF558-205ENST00000597304 ACCSQ96QU6 501 aa13.35□□□□□ -0.27
ZNF558-205ENST00000597304 FAM118BQ9BPY3 351 aa13.35□□□□□ -0.27
ZNF558-205ENST00000597304 LARSQ9P2J5 1176 aaKnown RBP13.35□□□□□ -0.27
ZNF558-205ENST00000597304 POLLQ9UGP5 575 aa13.35□□□□□ -0.27
ZNF558-205ENST00000597304 LRCH1Q9Y2L9 728 aa13.35□□□□□ -0.27
ZNF558-205ENST00000597304 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.35□□□□□ -0.27
ZNF558-205ENST00000597304 QSER1Q2KHR3 1735 aa13.35□□□□□ -0.27
ZNF558-205ENST00000597304 PMM2O15305 246 aa13.35□□□□□ -0.27
ZNF558-205ENST00000597304 MAP3K13O43283 966 aa13.35□□□□□ -0.27
ZNF558-205ENST00000597304 ECE2O60344 883 aa13.35□□□□□ -0.27
ZNF558-205ENST00000597304 RXRBP28702 533 aa13.35□□□□□ -0.27
ZNF558-205ENST00000597304 CLEC16AQ2KHT3 1053 aa13.35□□□□□ -0.27
ZNF558-205ENST00000597304 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.35□□□□□ -0.27
ZNF558-205ENST00000597304 GALNT15Q8N3T1 639 aa13.35□□□□□ -0.27
ZNF558-205ENST00000597304 RNF217Q8TC41 542 aa13.35□□□□□ -0.27
ZNF558-205ENST00000597304 FAM136AQ96C01 138 aa13.35□□□□□ -0.27
ZNF558-205ENST00000597304 LXNQ9BS40 222 aa13.35□□□□□ -0.27
ZNF558-205ENST00000597304 NPHS2Q9NP85 383 aa13.35□□□□□ -0.27
ZNF558-205ENST00000597304 F5H6K3 240 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 PIK3CDO00329 1044 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 MYBL1P10243 752 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 RFC5P40937 340 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 SLC1A5Q15758 541 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 CERKLQ49MI3 558 aaPredicted RBP13.34□□□□□ -0.27
ZNF558-205ENST00000597304 KHDC1Q4VXA5 237 aaKnown RBP13.34□□□□□ -0.27
ZNF558-205ENST00000597304 PCNX4Q63HM2 1172 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 CLNKQ7Z7G1 428 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 ZSWIM2Q8NEG5 633 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 ZNF398Q8TD17 642 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 DDX1Q92499 740 aaKnown RBP13.34□□□□□ -0.27
ZNF558-205ENST00000597304 FAM81BQ96LP2 452 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 CYLDQ9NQC7 956 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 SUGT1Q9Y2Z0 365 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 C2CD2Q9Y426 696 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 ADAMTSL1Q8N6G6 1762 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 FAM196BA6NMK8 535 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 TROVE2P10155 538 aaKnown RBP eCLIP13.34□□□□□ -0.27
ZNF558-205ENST00000597304 BMP3P12645 472 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 KLRC2P26717 231 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 ZRSR2Q15696 482 aaKnown RBP13.34□□□□□ -0.27
ZNF558-205ENST00000597304 CDC42EP5Q6NZY7 148 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 RFWD3Q6PCD5 774 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 AEBP2Q6ZN18 517 aaPredicted RBP13.34□□□□□ -0.27
ZNF558-205ENST00000597304 MTDHQ86UE4 582 aaKnown RBP13.34□□□□□ -0.27
ZNF558-205ENST00000597304 TMEM174Q8WUU8 243 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 SEMA4DQ92854 862 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 MIPEPQ99797 713 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 WDR11Q9BZH6 1224 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 UNC45AQ9H3U1 944 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 SCOCQ9UIL1 159 aa13.34□□□□□ -0.27
ZNF558-205ENST00000597304 SKIP12755 728 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 PLS3P13797 630 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 GCLCP48506 637 aaPredicted RBP13.33□□□□□ -0.28
ZNF558-205ENST00000597304 SCNN1DP51172 638 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 RCN2Q14257 317 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 RCN1Q15293 331 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 SNX30Q5VWJ9 437 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 LVRNQ6Q4G3 990 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 PADI6Q6TGC4 694 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 ANKS1BQ7Z6G8 1248 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 AMIGO3Q86WK7 504 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 LARGE2Q8N3Y3 721 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 HELQQ8TDG4 1101 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 ZFAND2BQ8WV99 257 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 UCMAQ8WVF2 138 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 ZNF75CPQ92670 426 aaPredicted RBP13.33□□□□□ -0.28
ZNF558-205ENST00000597304 NT5C1BQ96P26 610 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 VPS37BQ9H9H4 285 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 PIDD1Q9HB75 910 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 AVENQ9NQS1 362 aaPredicted RBP13.33□□□□□ -0.28
ZNF558-205ENST00000597304 TYROBPO43914 113 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 GRIN3BO60391 1043 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 CCDC22O60826 627 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 ZWINTO95229 277 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 MAPTP10636 758 aaKnown RBP13.33□□□□□ -0.28
ZNF558-205ENST00000597304 ADSSP30520 456 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 NFIAQ12857 509 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 PTP4A2Q12974 167 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 CTC1Q2NKJ3 1217 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 KRT39Q6A163 491 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 MCOLN2Q8IZK6 566 aa13.33□□□□□ -0.28
ZNF558-205ENST00000597304 CADM1Q9BY67 442 aaKnown RBP13.33□□□□□ -0.28
ZNF558-205ENST00000597304 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.33□□□□□ -0.28
ZNF558-205ENST00000597304 GOLGA8IPA6NC78 632 aa13.32□□□□□ -0.28
ZNF558-205ENST00000597304 SIGLEC16A6NMB1 481 aa13.32□□□□□ -0.28
ZNF558-205ENST00000597304 GOLGA8JA6NMD2 632 aa13.32□□□□□ -0.28
ZNF558-205ENST00000597304 DNALI1O14645 258 aaPredicted RBP13.32□□□□□ -0.28
ZNF558-205ENST00000597304 PSTPIP1O43586 416 aa13.32□□□□□ -0.28
ZNF558-205ENST00000597304 NDUFB10O96000 172 aa13.32□□□□□ -0.28
ZNF558-205ENST00000597304 CFBP00751 764 aa13.32□□□□□ -0.28
ZNF558-205ENST00000597304 ADRB2P07550 413 aa13.32□□□□□ -0.28
ZNF558-205ENST00000597304 FDX1P10109 184 aa13.32□□□□□ -0.28
ZNF558-205ENST00000597304 RNF220Q5VTB9 566 aa13.32□□□□□ -0.28
ZNF558-205ENST00000597304 DAB2IPQ5VWQ8 1189 aa13.32□□□□□ -0.28
ZNF558-205ENST00000597304 CAPN12Q6ZSI9 719 aa13.32□□□□□ -0.28
ZNF558-205ENST00000597304 CERS5Q8N5B7 392 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms