RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 CYP4A22Q5TCH4 519 aa17.08■□□□□ 0.32
LIG1-214ENST00000597146 SLC8B1Q6J4K2 584 aa17.08■□□□□ 0.32
LIG1-214ENST00000597146 KIAA1211LQ6NV74 962 aa17.08■□□□□ 0.32
LIG1-214ENST00000597146 MOXD1Q6UVY6 613 aa17.08■□□□□ 0.32
LIG1-214ENST00000597146 ANKS3Q6ZW76 656 aa17.08■□□□□ 0.32
LIG1-214ENST00000597146 OTUD6AQ7L8S5 288 aa17.08■□□□□ 0.32
LIG1-214ENST00000597146 GPIHBP1Q8IV16 184 aa17.08■□□□□ 0.32
LIG1-214ENST00000597146 YAF2Q8IY57 180 aa17.08■□□□□ 0.32
LIG1-214ENST00000597146 RNF26Q9BY78 433 aaPredicted RBP17.08■□□□□ 0.32
LIG1-214ENST00000597146 NFKBIZQ9BYH8 718 aa17.08■□□□□ 0.32
LIG1-214ENST00000597146 PDZD7Q9H5P4 517 aa17.08■□□□□ 0.32
LIG1-214ENST00000597146 C8orf33Q9H7E9 229 aaPredicted RBP17.08■□□□□ 0.32
LIG1-214ENST00000597146 TRPV4Q9HBA0 871 aa17.08■□□□□ 0.32
LIG1-214ENST00000597146 GOLGA2P5Q9HBQ8 144 aa17.08■□□□□ 0.32
LIG1-214ENST00000597146 KCNMB3Q9NPA1 279 aa17.08■□□□□ 0.32
LIG1-214ENST00000597146 PCDHA4Q9UN74 947 aa17.08■□□□□ 0.32
LIG1-214ENST00000597146 KIAA1549LQ6ZVL6 1849 aa17.07■□□□□ 0.32
LIG1-214ENST00000597146 HELZ2Q9BYK8 2649 aaKnown RBP17.07■□□□□ 0.32
LIG1-214ENST00000597146 ASCC3Q8N3C0 2202 aaKnown RBP17.07■□□□□ 0.32
LIG1-214ENST00000597146 MYBPHLA2RUH7 354 aa17.07■□□□□ 0.32
LIG1-214ENST00000597146 M0R2N6 131 aa17.07■□□□□ 0.32
LIG1-214ENST00000597146 TAF4O00268 1085 aa17.07■□□□□ 0.32
LIG1-214ENST00000597146 CPLX1O14810 134 aa17.07■□□□□ 0.32
LIG1-214ENST00000597146 ZIC2O95409 532 aaPredicted RBP17.07■□□□□ 0.32
LIG1-214ENST00000597146 MLLT6P55198 1093 aaPredicted RBP17.07■□□□□ 0.32
LIG1-214ENST00000597146 CCT2P78371 535 aaKnown RBP17.07■□□□□ 0.32
LIG1-214ENST00000597146 INF2Q27J81 1249 aa17.07■□□□□ 0.32
LIG1-214ENST00000597146 NCAPH2Q6IBW4 605 aa17.07■□□□□ 0.32
LIG1-214ENST00000597146 C1orf228Q6PIY5 440 aa17.07■□□□□ 0.32
LIG1-214ENST00000597146 CPLX2Q6PUV4 134 aaKnown RBP17.07■□□□□ 0.32
LIG1-214ENST00000597146 NOSTRINQ8IVI9 506 aa17.07■□□□□ 0.32
LIG1-214ENST00000597146 TCEAL8Q8IYN2 117 aa17.07■□□□□ 0.32
LIG1-214ENST00000597146 FAM200AQ8TCP9 573 aa17.07■□□□□ 0.32
LIG1-214ENST00000597146 ZFYVE19Q96K21 471 aa17.07■□□□□ 0.32
LIG1-214ENST00000597146 POLR3FQ9H1D9 316 aaPredicted RBP17.07■□□□□ 0.32
LIG1-214ENST00000597146 SLITRK6Q9H5Y7 841 aa17.07■□□□□ 0.32
LIG1-214ENST00000597146 ZSWIM6Q9HCJ5 1215 aa17.07■□□□□ 0.32
LIG1-214ENST00000597146 PDRG1Q9NUG6 133 aa17.07■□□□□ 0.32
LIG1-214ENST00000597146 GTSE1Q9NYZ3 720 aa17.07■□□□□ 0.32
LIG1-214ENST00000597146 CEP72Q9P209 647 aa17.07■□□□□ 0.32
LIG1-214ENST00000597146 USP20Q9Y2K6 914 aa17.07■□□□□ 0.32
LIG1-214ENST00000597146 MYO16Q9Y6X6 1858 aa17.07■□□□□ 0.32
LIG1-214ENST00000597146 CHADO15335 359 aa17.06■□□□□ 0.32
LIG1-214ENST00000597146 ATF2P15336 505 aa17.06■□□□□ 0.32
LIG1-214ENST00000597146 EPHA7Q15375 998 aa17.06■□□□□ 0.32
LIG1-214ENST00000597146 PLK5Q496M5 336 aa17.06■□□□□ 0.32
LIG1-214ENST00000597146 SHKBP1Q8TBC3 707 aa17.06■□□□□ 0.32
LIG1-214ENST00000597146 C22orf23Q9BZE7 217 aa17.06■□□□□ 0.32
LIG1-214ENST00000597146 ZSWIM4Q9H7M6 989 aa17.06■□□□□ 0.32
LIG1-214ENST00000597146 POLR3BQ9NW08 1133 aaPredicted RBP17.06■□□□□ 0.32
LIG1-214ENST00000597146 GDAQ9Y2T3 454 aa17.06■□□□□ 0.32
LIG1-214ENST00000597146 LNP1A1A4G5 178 aa17.05■□□□□ 0.32
LIG1-214ENST00000597146 LRRIQ4A6NIV6 560 aa17.05■□□□□ 0.32
LIG1-214ENST00000597146 RBM25P49756 843 aaKnown RBP17.05■□□□□ 0.32
LIG1-214ENST00000597146 FCHO2Q0JRZ9 810 aa17.05■□□□□ 0.32
LIG1-214ENST00000597146 TWF1Q12792 350 aa17.05■□□□□ 0.32
LIG1-214ENST00000597146 STXBP5Q5T5C0 1151 aa17.05■□□□□ 0.32
LIG1-214ENST00000597146 IQCEQ6IPM2 695 aa17.05■□□□□ 0.32
LIG1-214ENST00000597146 PPP4R3CPQ6ZMV5 832 aa17.05■□□□□ 0.32
LIG1-214ENST00000597146 RALGPS2Q86X27 583 aaPredicted RBP17.05■□□□□ 0.32
LIG1-214ENST00000597146 TPH2Q8IWU9 490 aa17.05■□□□□ 0.32
LIG1-214ENST00000597146 TRIM22Q8IYM9 498 aa17.05■□□□□ 0.32
LIG1-214ENST00000597146 BLIDQ8IZY5 108 aa17.05■□□□□ 0.32
LIG1-214ENST00000597146 ZC3H10Q96K80 434 aaKnown RBP17.05■□□□□ 0.32
LIG1-214ENST00000597146 TM6SF1Q9BZW5 370 aa17.05■□□□□ 0.32
LIG1-214ENST00000597146 SH3GLB2Q9NR46 395 aa17.05■□□□□ 0.32
LIG1-214ENST00000597146 ASAH2Q9NR71 780 aa17.05■□□□□ 0.32
LIG1-214ENST00000597146 THADAQ6YHU6 1953 aa17.05■□□□□ 0.32
LIG1-214ENST00000597146 CACNA1EQ15878 2313 aa17.05■□□□□ 0.32
LIG1-214ENST00000597146 ABCA7Q8IZY2 2146 aa17.05■□□□□ 0.32
LIG1-214ENST00000597146 EDN1P05305 212 aa17.04■□□□□ 0.32
LIG1-214ENST00000597146 PDIA3P30101 505 aaKnown RBP17.04■□□□□ 0.32
LIG1-214ENST00000597146 EPHA5P54756 1037 aa17.04■□□□□ 0.32
LIG1-214ENST00000597146 CREB5Q02930 508 aa17.04■□□□□ 0.32
LIG1-214ENST00000597146 SSRP1Q08945 709 aaKnown RBP17.04■□□□□ 0.32
LIG1-214ENST00000597146 NPY5RQ15761 445 aa17.04■□□□□ 0.32
LIG1-214ENST00000597146 UPP1Q16831 310 aa17.04■□□□□ 0.32
LIG1-214ENST00000597146 TMEM132AQ24JP5 1023 aa17.04■□□□□ 0.32
LIG1-214ENST00000597146 ELMOD1Q8N336 334 aa17.04■□□□□ 0.32
LIG1-214ENST00000597146 HAS1Q92839 578 aa17.04■□□□□ 0.32
LIG1-214ENST00000597146 ZNF512Q96ME7 567 aaPredicted RBP17.04■□□□□ 0.32
LIG1-214ENST00000597146 FAM20AQ96MK3 541 aa17.04■□□□□ 0.32
LIG1-214ENST00000597146 LRRC3BQ96PB8 259 aa17.04■□□□□ 0.32
LIG1-214ENST00000597146 PPP1R10Q96QC0 940 aaKnown RBP17.04■□□□□ 0.32
LIG1-214ENST00000597146 LARP6Q9BRS8 491 aaKnown RBP17.04■□□□□ 0.32
LIG1-214ENST00000597146 DUSP15Q9H1R2 295 aaPredicted RBP17.04■□□□□ 0.32
LIG1-214ENST00000597146 NCOA5Q9HCD5 579 aaKnown RBP17.04■□□□□ 0.32
LIG1-214ENST00000597146 GPRC5CQ9NQ84 441 aa17.04■□□□□ 0.32
LIG1-214ENST00000597146 PRMT7Q9NVM4 692 aaPredicted RBP17.04■□□□□ 0.32
LIG1-214ENST00000597146 CITO14578 2027 aa17.03■□□□□ 0.32
LIG1-214ENST00000597146 A0A1W2PRU2 124 aa17.03■□□□□ 0.32
LIG1-214ENST00000597146 N4BP3O15049 544 aa17.03■□□□□ 0.32
LIG1-214ENST00000597146 DCLK1O15075 740 aa17.03■□□□□ 0.32
LIG1-214ENST00000597146 HYAL3O43820 417 aaPredicted RBP17.03■□□□□ 0.32
LIG1-214ENST00000597146 DGAT1O75907 488 aa17.03■□□□□ 0.32
LIG1-214ENST00000597146 IFNAR1P17181 557 aa17.03■□□□□ 0.32
LIG1-214ENST00000597146 SOX4Q06945 474 aaPredicted RBP17.03■□□□□ 0.32
LIG1-214ENST00000597146 TNK2Q07912 1038 aa17.03■□□□□ 0.32
LIG1-214ENST00000597146 STK3Q13188 491 aa17.03■□□□□ 0.32
LIG1-214ENST00000597146 DAB2IPQ5VWQ8 1189 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms