RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 LNX1Q8TBB1 728 aaPredicted RBP19.77■□□□□ 0.76
ZNF558-204ENST00000596172 CACTINQ8WUQ7 758 aaKnown RBP19.77■□□□□ 0.76
ZNF558-204ENST00000596172 SMARCE1Q969G3 411 aa19.77■□□□□ 0.76
ZNF558-204ENST00000596172 SUSD3Q96L08 255 aa19.77■□□□□ 0.76
ZNF558-204ENST00000596172 B3GALT6Q96L58 329 aa19.77■□□□□ 0.76
ZNF558-204ENST00000596172 DPP3Q9NY33 737 aa19.77■□□□□ 0.76
ZNF558-204ENST00000596172 TRAF3IP3Q9Y228 551 aa19.77■□□□□ 0.76
ZNF558-204ENST00000596172 TRIP11Q15643 1979 aa19.77■□□□□ 0.75
ZNF558-204ENST00000596172 H3BQ06 376 aaPredicted RBP19.76■□□□□ 0.75
ZNF558-204ENST00000596172 BRCC3P46736 316 aa19.76■□□□□ 0.75
ZNF558-204ENST00000596172 CLCN4P51793 760 aa19.76■□□□□ 0.75
ZNF558-204ENST00000596172 WNT7BP56706 349 aa19.76■□□□□ 0.75
ZNF558-204ENST00000596172 SNRNP35Q16560 246 aaKnown RBP19.76■□□□□ 0.75
ZNF558-204ENST00000596172 NFIL3Q16649 462 aa19.76■□□□□ 0.75
ZNF558-204ENST00000596172 C9orf57Q5W0N0 161 aa19.76■□□□□ 0.75
ZNF558-204ENST00000596172 PDE11AQ9HCR9 933 aa19.76■□□□□ 0.75
ZNF558-204ENST00000596172 M0QZQ0 153 aa19.75■□□□□ 0.75
ZNF558-204ENST00000596172 CYP2J2P51589 502 aa19.75■□□□□ 0.75
ZNF558-204ENST00000596172 GUCY2FP51841 1108 aa19.75■□□□□ 0.75
ZNF558-204ENST00000596172 LILRA4P59901 499 aa19.75■□□□□ 0.75
ZNF558-204ENST00000596172 RBM10P98175 930 aaKnown RBP19.75■□□□□ 0.75
ZNF558-204ENST00000596172 ZNF658Q5TYW1 1059 aaPredicted RBP19.75■□□□□ 0.75
ZNF558-204ENST00000596172 ANKRD54Q6NXT1 300 aa19.75■□□□□ 0.75
ZNF558-204ENST00000596172 ANKS3Q6ZW76 656 aa19.75■□□□□ 0.75
ZNF558-204ENST00000596172 CEP57Q86XR8 500 aa19.75■□□□□ 0.75
ZNF558-204ENST00000596172 MFSD14AQ96MC6 490 aa19.75■□□□□ 0.75
ZNF558-204ENST00000596172 DZANK1Q9NVP4 752 aa19.75■□□□□ 0.75
ZNF558-204ENST00000596172 DPP7Q9UHL4 492 aa19.75■□□□□ 0.75
ZNF558-204ENST00000596172 CD207Q9UJ71 328 aa19.75■□□□□ 0.75
ZNF558-204ENST00000596172 BARX2Q9UMQ3 279 aaPredicted RBP19.75■□□□□ 0.75
ZNF558-204ENST00000596172 BACE2Q9Y5Z0 518 aa19.75■□□□□ 0.75
ZNF558-204ENST00000596172 GRXCR2A6NFK2 248 aa19.74■□□□□ 0.75
ZNF558-204ENST00000596172 CALUO43852 315 aaPredicted RBP19.74■□□□□ 0.75
ZNF558-204ENST00000596172 EXOC3O60645 756 aa19.74■□□□□ 0.75
ZNF558-204ENST00000596172 TKTP29401 623 aaKnown RBP19.74■□□□□ 0.75
ZNF558-204ENST00000596172 MCM4P33991 863 aa19.74■□□□□ 0.75
ZNF558-204ENST00000596172 KCNQ1P51787 676 aa19.74■□□□□ 0.75
ZNF558-204ENST00000596172 TFAMQ00059 246 aaKnown RBP19.74■□□□□ 0.75
ZNF558-204ENST00000596172 CYP24A1Q07973 514 aa19.74■□□□□ 0.75
ZNF558-204ENST00000596172 MRPL58Q14197 206 aaKnown RBP19.74■□□□□ 0.75
ZNF558-204ENST00000596172 PSMD6Q15008 389 aa19.74■□□□□ 0.75
ZNF558-204ENST00000596172 PSMD5Q16401 504 aa19.74■□□□□ 0.75
ZNF558-204ENST00000596172 LLGL2Q6P1M3 1020 aa19.74■□□□□ 0.75
ZNF558-204ENST00000596172 PRSS55Q6UWB4 352 aaPredicted RBP19.74■□□□□ 0.75
ZNF558-204ENST00000596172 SMRP1Q8NCR6 262 aa19.74■□□□□ 0.75
ZNF558-204ENST00000596172 APPL2Q8NEU8 664 aa19.74■□□□□ 0.75
ZNF558-204ENST00000596172 NOC3LQ8WTT2 800 aaKnown RBP19.74■□□□□ 0.75
ZNF558-204ENST00000596172 HDAC7Q8WUI4 952 aa19.74■□□□□ 0.75
ZNF558-204ENST00000596172 CLSTN3Q9BQT9 956 aa19.74■□□□□ 0.75
ZNF558-204ENST00000596172 MTRRQ9UBK8 725 aa19.74■□□□□ 0.75
ZNF558-204ENST00000596172 PCDHB8Q9UN66 801 aa19.74■□□□□ 0.75
ZNF558-204ENST00000596172 FAM50BQ9Y247 325 aa19.74■□□□□ 0.75
ZNF558-204ENST00000596172 I3L4J1 428 aa19.73■□□□□ 0.75
ZNF558-204ENST00000596172 NR3C1P04150 777 aa19.73■□□□□ 0.75
ZNF558-204ENST00000596172 EPCAMP16422 314 aa19.73■□□□□ 0.75
ZNF558-204ENST00000596172 SMAD4Q13485 552 aaKnown RBP19.73■□□□□ 0.75
ZNF558-204ENST00000596172 DUOXA2Q1HG44 320 aa19.73■□□□□ 0.75
ZNF558-204ENST00000596172 PTCRAQ6ISU1 281 aaPredicted RBP19.73■□□□□ 0.75
ZNF558-204ENST00000596172 LILRA6Q6PI73 481 aa19.73■□□□□ 0.75
ZNF558-204ENST00000596172 SYCE2Q6PIF2 218 aa19.73■□□□□ 0.75
ZNF558-204ENST00000596172 TMEM130Q8N3G9 435 aa19.73■□□□□ 0.75
ZNF558-204ENST00000596172 RDH13Q8NBN7 331 aa19.73■□□□□ 0.75
ZNF558-204ENST00000596172 GBP4Q96PP9 640 aa19.73■□□□□ 0.75
ZNF558-204ENST00000596172 S1PR5Q9H228 398 aa19.73■□□□□ 0.75
ZNF558-204ENST00000596172 INTS13Q9NVM9 706 aa19.73■□□□□ 0.75
ZNF558-204ENST00000596172 ITGA11Q9UKX5 1188 aa19.73■□□□□ 0.75
ZNF558-204ENST00000596172 MAPK8IP1Q9UQF2 711 aa19.73■□□□□ 0.75
ZNF558-204ENST00000596172 PDCD11Q14690 1871 aaKnown RBP19.73■□□□□ 0.75
ZNF558-204ENST00000596172 H7C4K7 107 aa19.72■□□□□ 0.75
ZNF558-204ENST00000596172 PPEF2O14830 753 aa19.72■□□□□ 0.75
ZNF558-204ENST00000596172 TBC1D4O60343 1298 aa19.72■□□□□ 0.75
ZNF558-204ENST00000596172 GLUD1P00367 558 aa19.72■□□□□ 0.75
ZNF558-204ENST00000596172 PNPLA4P41247 253 aa19.72■□□□□ 0.75
ZNF558-204ENST00000596172 ZCWPW2Q504Y3 356 aa19.72■□□□□ 0.75
ZNF558-204ENST00000596172 VARS2Q5ST30 1063 aaKnown RBP19.72■□□□□ 0.75
ZNF558-204ENST00000596172 WDR49Q8IV35 697 aa19.72■□□□□ 0.75
ZNF558-204ENST00000596172 C1orf127Q8N9H9 656 aa19.72■□□□□ 0.75
ZNF558-204ENST00000596172 CXorf38Q8TB03 319 aa19.72■□□□□ 0.75
ZNF558-204ENST00000596172 ERCC4Q92889 916 aaPredicted RBP19.72■□□□□ 0.75
ZNF558-204ENST00000596172 OXCT2Q9BYC2 517 aaPredicted RBP19.72■□□□□ 0.75
ZNF558-204ENST00000596172 ARHGEF37A1IGU5 675 aa19.71■□□□□ 0.75
ZNF558-204ENST00000596172 MAPK13O15264 365 aa19.71■□□□□ 0.75
ZNF558-204ENST00000596172 MBTPS2O43462 519 aa19.71■□□□□ 0.75
ZNF558-204ENST00000596172 OAZ2O95190 189 aa19.71■□□□□ 0.75
ZNF558-204ENST00000596172 RPL17P18621 184 aaKnown RBP19.71■□□□□ 0.75
ZNF558-204ENST00000596172 TYMPP19971 482 aa19.71■□□□□ 0.75
ZNF558-204ENST00000596172 RPL13P26373 211 aaKnown RBP19.71■□□□□ 0.75
ZNF558-204ENST00000596172 PRCPP42785 496 aa19.71■□□□□ 0.75
ZNF558-204ENST00000596172 TAF6P49848 677 aa19.71■□□□□ 0.75
ZNF558-204ENST00000596172 ITIH3Q06033 890 aa19.71■□□□□ 0.75
ZNF558-204ENST00000596172 RAB33AQ14088 237 aa19.71■□□□□ 0.75
ZNF558-204ENST00000596172 EDRF1Q3B7T1 1238 aa19.71■□□□□ 0.75
ZNF558-204ENST00000596172 SLC8B1Q6J4K2 584 aa19.71■□□□□ 0.75
ZNF558-204ENST00000596172 ELMSAN1Q6PJG2 1045 aa19.71■□□□□ 0.75
ZNF558-204ENST00000596172 LRRC52Q8N7C0 313 aa19.71■□□□□ 0.75
ZNF558-204ENST00000596172 ANKRD36BP1Q96IX9 119 aa19.71■□□□□ 0.75
ZNF558-204ENST00000596172 FNBP1Q96RU3 617 aa19.71■□□□□ 0.75
ZNF558-204ENST00000596172 PLEKHA4Q9H4M7 779 aa19.71■□□□□ 0.75
ZNF558-204ENST00000596172 SPTLC1O15269 473 aa19.7■□□□□ 0.74
ZNF558-204ENST00000596172 TGM5O43548 720 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms