RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 CD300LGQ6UXG3 332 aa17.41■□□□□ 0.38
USHBP1-205ENST00000595993 MYCT1Q8N699 235 aa17.41■□□□□ 0.38
USHBP1-205ENST00000595993 SHDQ96IW2 340 aa17.41■□□□□ 0.38
USHBP1-205ENST00000595993 OSBPL6Q9BZF3 934 aa17.41■□□□□ 0.38
USHBP1-205ENST00000595993 FOXQ1Q9C009 403 aa17.41■□□□□ 0.38
USHBP1-205ENST00000595993 SCAND2PQ9GZW5 306 aaPredicted RBP17.41■□□□□ 0.38
USHBP1-205ENST00000595993 ZHX3Q9H4I2 956 aa17.41■□□□□ 0.38
USHBP1-205ENST00000595993 PARVGQ9HBI0 331 aa17.41■□□□□ 0.38
USHBP1-205ENST00000595993 FAM13BQ9NYF5 915 aa17.41■□□□□ 0.38
USHBP1-205ENST00000595993 LARSQ9P2J5 1176 aaKnown RBP17.41■□□□□ 0.38
USHBP1-205ENST00000595993 MTRRQ9UBK8 725 aa17.41■□□□□ 0.38
USHBP1-205ENST00000595993 KCNH3Q9ULD8 1083 aa17.41■□□□□ 0.38
USHBP1-205ENST00000595993 CACNA1IQ9P0X4 2223 aa17.41■□□□□ 0.38
USHBP1-205ENST00000595993 A0A1B0GVL5 298 aa17.4■□□□□ 0.38
USHBP1-205ENST00000595993 XYLBO75191 536 aa17.4■□□□□ 0.38
USHBP1-205ENST00000595993 PFKFB1P16118 471 aa17.4■□□□□ 0.38
USHBP1-205ENST00000595993 CMA1P23946 247 aa17.4■□□□□ 0.38
USHBP1-205ENST00000595993 PRKCQQ04759 706 aa17.4■□□□□ 0.38
USHBP1-205ENST00000595993 RSPO2Q6UXX9 243 aaPredicted RBP17.4■□□□□ 0.38
USHBP1-205ENST00000595993 SFR1Q86XK3 245 aa17.4■□□□□ 0.38
USHBP1-205ENST00000595993 CEP57Q86XR8 500 aa17.4■□□□□ 0.38
USHBP1-205ENST00000595993 IQUBQ8NA54 791 aa17.4■□□□□ 0.38
USHBP1-205ENST00000595993 ST13P5Q8NFI4 369 aaPredicted RBP17.4■□□□□ 0.38
USHBP1-205ENST00000595993 ITFG1Q8TB96 612 aa17.4■□□□□ 0.38
USHBP1-205ENST00000595993 PPP1R10Q96QC0 940 aaKnown RBP17.4■□□□□ 0.38
USHBP1-205ENST00000595993 KBTBD4Q9NVX7 518 aa17.4■□□□□ 0.38
USHBP1-205ENST00000595993 CIZ1Q9ULV3 898 aaPredicted RBP17.4■□□□□ 0.38
USHBP1-205ENST00000595993 HPSEQ9Y251 543 aa17.4■□□□□ 0.38
USHBP1-205ENST00000595993 RBM19Q9Y4C8 960 aaKnown RBP17.4■□□□□ 0.38
USHBP1-205ENST00000595993 BACE2Q9Y5Z0 518 aa17.4■□□□□ 0.38
USHBP1-205ENST00000595993 CEP250Q9BV73 2442 aa17.4■□□□□ 0.38
USHBP1-205ENST00000595993 KANSL1LA0AUZ9 987 aa17.39■□□□□ 0.37
USHBP1-205ENST00000595993 K7ENM7 598 aa17.39■□□□□ 0.37
USHBP1-205ENST00000595993 CCL16O15467 120 aa17.39■□□□□ 0.37
USHBP1-205ENST00000595993 TRAK2O60296 914 aa17.39■□□□□ 0.37
USHBP1-205ENST00000595993 LRRN2O75325 713 aa17.39■□□□□ 0.37
USHBP1-205ENST00000595993 IGFBP6P24592 240 aaPredicted RBP17.39■□□□□ 0.37
USHBP1-205ENST00000595993 NMT1P30419 496 aaKnown RBP17.39■□□□□ 0.37
USHBP1-205ENST00000595993 SMTNP53814 917 aa17.39■□□□□ 0.37
USHBP1-205ENST00000595993 MLF2Q15773 248 aaPredicted RBP17.39■□□□□ 0.37
USHBP1-205ENST00000595993 TMEM132AQ24JP5 1023 aa17.39■□□□□ 0.37
USHBP1-205ENST00000595993 ZNF528Q3MIS6 628 aa17.39■□□□□ 0.37
USHBP1-205ENST00000595993 DCAF4L1Q3SXM0 396 aa17.39■□□□□ 0.37
USHBP1-205ENST00000595993 ATF7IP2Q5U623 682 aa17.39■□□□□ 0.37
USHBP1-205ENST00000595993 HAUS6Q7Z4H7 955 aa17.39■□□□□ 0.37
USHBP1-205ENST00000595993 NPAS3Q8IXF0 933 aa17.39■□□□□ 0.37
USHBP1-205ENST00000595993 SUMF1Q8NBK3 374 aa17.39■□□□□ 0.37
USHBP1-205ENST00000595993 SLC7A14Q8TBB6 771 aa17.39■□□□□ 0.37
USHBP1-205ENST00000595993 KCNN1Q92952 543 aa17.39■□□□□ 0.37
USHBP1-205ENST00000595993 RMDN1Q96DB5 314 aa17.39■□□□□ 0.37
USHBP1-205ENST00000595993 BORCS6Q96GS4 357 aa17.39■□□□□ 0.37
USHBP1-205ENST00000595993 ACO2Q99798 780 aaKnown RBP17.39■□□□□ 0.37
USHBP1-205ENST00000595993 ADPGKQ9BRR6 497 aa17.39■□□□□ 0.37
USHBP1-205ENST00000595993 TARS2Q9BW92 718 aaKnown RBP17.39■□□□□ 0.37
USHBP1-205ENST00000595993 TNMDQ9H2S6 317 aa17.39■□□□□ 0.37
USHBP1-205ENST00000595993 CUEDC2Q9H467 287 aa17.39■□□□□ 0.37
USHBP1-205ENST00000595993 GOLPH3LQ9H4A5 285 aa17.39■□□□□ 0.37
USHBP1-205ENST00000595993 AVENQ9NQS1 362 aaPredicted RBP17.39■□□□□ 0.37
USHBP1-205ENST00000595993 DNMT3BQ9UBC3 853 aaKnown RBP17.39■□□□□ 0.37
USHBP1-205ENST00000595993 TNFSF13BQ9Y275 285 aa17.39■□□□□ 0.37
USHBP1-205ENST00000595993 TRIP11Q15643 1979 aa17.39■□□□□ 0.37
USHBP1-205ENST00000595993 ABLIM1O14639 778 aa17.38■□□□□ 0.37
USHBP1-205ENST00000595993 OR1D2P34982 312 aa17.38■□□□□ 0.37
USHBP1-205ENST00000595993 SNW1Q13573 536 aaKnown RBP17.38■□□□□ 0.37
USHBP1-205ENST00000595993 UPP1Q16831 310 aa17.38■□□□□ 0.37
USHBP1-205ENST00000595993 XKR4Q5GH76 650 aa17.38■□□□□ 0.37
USHBP1-205ENST00000595993 UROC1Q96N76 676 aa17.38■□□□□ 0.37
USHBP1-205ENST00000595993 MRPL4Q9BYD3 311 aaKnown RBP17.38■□□□□ 0.37
USHBP1-205ENST00000595993 PTPRHQ9HD43 1115 aa17.38■□□□□ 0.37
USHBP1-205ENST00000595993 HCFC1R1Q9NWW0 138 aa17.38■□□□□ 0.37
USHBP1-205ENST00000595993 SERTAD1Q9UHV2 236 aa17.38■□□□□ 0.37
USHBP1-205ENST00000595993 FBXO4Q9UKT5 387 aa17.38■□□□□ 0.37
USHBP1-205ENST00000595993 FAM237AA0A1B0GTK4 181 aa17.37■□□□□ 0.37
USHBP1-205ENST00000595993 FRMD3A2A2Y4 597 aa17.37■□□□□ 0.37
USHBP1-205ENST00000595993 ACTN4O43707 911 aaKnown RBP17.37■□□□□ 0.37
USHBP1-205ENST00000595993 PROZP22891 400 aa17.37■□□□□ 0.37
USHBP1-205ENST00000595993 CASP1P29466 404 aa17.37■□□□□ 0.37
USHBP1-205ENST00000595993 NDUFA8P51970 172 aa17.37■□□□□ 0.37
USHBP1-205ENST00000595993 PFKPQ01813 784 aa17.37■□□□□ 0.37
USHBP1-205ENST00000595993 PABPC1LQ4VXU2 614 aaKnown RBP17.37■□□□□ 0.37
USHBP1-205ENST00000595993 SLC44A4Q53GD3 710 aa17.37■□□□□ 0.37
USHBP1-205ENST00000595993 POTEHQ6S545 545 aa17.37■□□□□ 0.37
USHBP1-205ENST00000595993 GRAMD1CQ8IYS0 662 aa17.37■□□□□ 0.37
USHBP1-205ENST00000595993 C3orf58Q8NDZ4 430 aa17.37■□□□□ 0.37
USHBP1-205ENST00000595993 RUBCNQ92622 972 aa17.37■□□□□ 0.37
USHBP1-205ENST00000595993 NELL1Q92832 810 aa17.37■□□□□ 0.37
USHBP1-205ENST00000595993 DDX27Q96GQ7 796 aaKnown RBP17.37■□□□□ 0.37
USHBP1-205ENST00000595993 FGFBP2Q9BYJ0 223 aa17.37■□□□□ 0.37
USHBP1-205ENST00000595993 TRIM9Q9C026 710 aa17.37■□□□□ 0.37
USHBP1-205ENST00000595993 CDT1Q9H211 546 aa17.37■□□□□ 0.37
USHBP1-205ENST00000595993 KCNG1Q9UIX4 513 aa17.37■□□□□ 0.37
USHBP1-205ENST00000595993 MTF2Q9Y483 593 aaPredicted RBP17.37■□□□□ 0.37
USHBP1-205ENST00000595993 CDY1Q9Y6F8 540 aa17.37■□□□□ 0.37
USHBP1-205ENST00000595993 GPR179Q6PRD1 2367 aa17.37■□□□□ 0.37
USHBP1-205ENST00000595993 COL4A2P08572 1712 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 A0A1W2PQ27 194 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 A0A1W2PQ64 194 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 A0A1W2PQD8 194 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 ARHGEF37A1IGU5 675 aa17.36■□□□□ 0.37
USHBP1-205ENST00000595993 SHISA7A6NL88 538 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms