RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 IGSF10Q6WRI0 2623 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 SPECC1L-ADORA2AF8WAN1 911 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 MICAL2O94851 1124 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 SLITRK3O94933 977 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 PRKCBP05771 671 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 ATF2P15336 505 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 IFNAR1P17181 557 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 MPLP40238 635 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 TEAD2Q15562 447 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 NPY5RQ15761 445 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 SLC8B1Q6J4K2 584 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 MOXD1Q6UVY6 613 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 MAEAQ7L5Y9 396 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 GATA6Q92908 595 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 ZNF274Q96GC6 653 aaPredicted RBP15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 ZFYVE19Q96K21 471 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 FAM20AQ96MK3 541 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 LRRC3BQ96PB8 259 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 LARP6Q9BRS8 491 aaKnown RBP15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 SCNM1Q9BWG6 230 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 NFKBIZQ9BYH8 718 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 C22orf23Q9BZE7 217 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 PDZD7Q9H5P4 517 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 TRPV4Q9HBA0 871 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 GPRC5CQ9NQ84 441 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 SH3GLB2Q9NR46 395 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 PDRG1Q9NUG6 133 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 INSL5Q9Y5Q6 135 aa15.16■□□□□ 0.02
SHKBP1-208ENST00000595726 LRRIQ4A6NIV6 560 aa15.15■□□□□ 0.02
SHKBP1-208ENST00000595726 SEC24BO95487 1268 aa15.15■□□□□ 0.02
SHKBP1-208ENST00000595726 CCDC192P0DO97 292 aa15.15■□□□□ 0.02
SHKBP1-208ENST00000595726 MLLT6P55198 1093 aaPredicted RBP15.15■□□□□ 0.02
SHKBP1-208ENST00000595726 DGKKQ5KSL6 1271 aa15.15■□□□□ 0.02
SHKBP1-208ENST00000595726 SH3PXD2AQ5TCZ1 1133 aa15.15■□□□□ 0.02
SHKBP1-208ENST00000595726 YAF2Q8IY57 180 aa15.15■□□□□ 0.02
SHKBP1-208ENST00000595726 TCEAL8Q8IYN2 117 aa15.15■□□□□ 0.02
SHKBP1-208ENST00000595726 ZNF512Q96ME7 567 aaPredicted RBP15.15■□□□□ 0.02
SHKBP1-208ENST00000595726 AIFM3Q96NN9 605 aa15.15■□□□□ 0.02
SHKBP1-208ENST00000595726 POLR3FQ9H1D9 316 aaPredicted RBP15.15■□□□□ 0.02
SHKBP1-208ENST00000595726 SLITRK6Q9H5Y7 841 aa15.15■□□□□ 0.02
SHKBP1-208ENST00000595726 C8orf33Q9H7E9 229 aaPredicted RBP15.15■□□□□ 0.02
SHKBP1-208ENST00000595726 VPS45Q9NRW7 570 aa15.15■□□□□ 0.02
SHKBP1-208ENST00000595726 GTSE1Q9NYZ3 720 aa15.15■□□□□ 0.02
SHKBP1-208ENST00000595726 MYBPHLA2RUH7 354 aa15.14■□□□□ 0.01
SHKBP1-208ENST00000595726 TMEM189-UBE2V1I3L0A0 370 aa15.14■□□□□ 0.01
SHKBP1-208ENST00000595726 CHADO15335 359 aa15.14■□□□□ 0.01
SHKBP1-208ENST00000595726 ZIC2O95409 532 aaPredicted RBP15.14■□□□□ 0.01
SHKBP1-208ENST00000595726 CTHP32929 405 aa15.14■□□□□ 0.01
SHKBP1-208ENST00000595726 TWF1Q12792 350 aa15.14■□□□□ 0.01
SHKBP1-208ENST00000595726 CCINQ13939 588 aa15.14■□□□□ 0.01
SHKBP1-208ENST00000595726 UPP1Q16831 310 aa15.14■□□□□ 0.01
SHKBP1-208ENST00000595726 EEF1DP3Q658K8 133 aa15.14■□□□□ 0.01
SHKBP1-208ENST00000595726 IQCEQ6IPM2 695 aa15.14■□□□□ 0.01
SHKBP1-208ENST00000595726 SHKBP1Q8TBC3 707 aa15.14■□□□□ 0.01
SHKBP1-208ENST00000595726 ZCCHC14Q8WYQ9 949 aaKnown RBP15.14■□□□□ 0.01
SHKBP1-208ENST00000595726 EDEM2Q9BV94 578 aa15.14■□□□□ 0.01
SHKBP1-208ENST00000595726 FZD8Q9H461 694 aa15.14■□□□□ 0.01
SHKBP1-208ENST00000595726 MARCH6O60337 910 aa15.13■□□□□ 0.01
SHKBP1-208ENST00000595726 EIF5BO60841 1220 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-208ENST00000595726 EDN1P05305 212 aa15.13■□□□□ 0.01
SHKBP1-208ENST00000595726 LIG1P18858 919 aa15.13■□□□□ 0.01
SHKBP1-208ENST00000595726 SOX4Q06945 474 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-208ENST00000595726 TNK2Q07912 1038 aa15.13■□□□□ 0.01
SHKBP1-208ENST00000595726 STK3Q13188 491 aa15.13■□□□□ 0.01
SHKBP1-208ENST00000595726 TMEM132AQ24JP5 1023 aa15.13■□□□□ 0.01
SHKBP1-208ENST00000595726 STXBP5Q5T5C0 1151 aa15.13■□□□□ 0.01
SHKBP1-208ENST00000595726 KIAA1211LQ6NV74 962 aa15.13■□□□□ 0.01
SHKBP1-208ENST00000595726 PPP4R3CPQ6ZMV5 832 aa15.13■□□□□ 0.01
SHKBP1-208ENST00000595726 RALGPS2Q86X27 583 aaPredicted RBP15.13■□□□□ 0.01
SHKBP1-208ENST00000595726 FAM200AQ8TCP9 573 aa15.13■□□□□ 0.01
SHKBP1-208ENST00000595726 PIGOQ8TEQ8 1089 aa15.13■□□□□ 0.01
SHKBP1-208ENST00000595726 PPP1R10Q96QC0 940 aaKnown RBP15.13■□□□□ 0.01
SHKBP1-208ENST00000595726 FBXL5Q9UKA1 691 aa15.13■□□□□ 0.01
SHKBP1-208ENST00000595726 PCDHGA5Q9Y5G8 931 aa15.13■□□□□ 0.01
SHKBP1-208ENST00000595726 SPAG17Q6Q759 2223 aa15.13■□□□□ 0.01
SHKBP1-208ENST00000595726 TMEM8BA6NDV4 472 aa15.12■□□□□ 0.01
SHKBP1-208ENST00000595726 N4BP3O15049 544 aa15.12■□□□□ 0.01
SHKBP1-208ENST00000595726 DCLK1O15075 740 aa15.12■□□□□ 0.01
SHKBP1-208ENST00000595726 TRAPPC3O43617 180 aa15.12■□□□□ 0.01
SHKBP1-208ENST00000595726 DGAT1O75907 488 aa15.12■□□□□ 0.01
SHKBP1-208ENST00000595726 FCHO2Q0JRZ9 810 aa15.12■□□□□ 0.01
SHKBP1-208ENST00000595726 PLK5Q496M5 336 aa15.12■□□□□ 0.01
SHKBP1-208ENST00000595726 ELMOD1Q8N336 334 aa15.12■□□□□ 0.01
SHKBP1-208ENST00000595726 MSANTD3Q96H12 275 aa15.12■□□□□ 0.01
SHKBP1-208ENST00000595726 ZC3H10Q96K80 434 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-208ENST00000595726 EIF2AK1Q9BQI3 630 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-208ENST00000595726 DUSP15Q9H1R2 295 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-208ENST00000595726 ASH1LQ9NR48 2969 aaKnown RBP15.12■□□□□ 0.01
SHKBP1-208ENST00000595726 PRMT7Q9NVM4 692 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-208ENST00000595726 KCNJ14Q9UNX9 436 aa15.12■□□□□ 0.01
SHKBP1-208ENST00000595726 ARID2Q68CP9 1835 aa15.11■□□□□ 0.01
SHKBP1-208ENST00000595726 A0A1W2PRU2 124 aa15.11■□□□□ 0.01
SHKBP1-208ENST00000595726 CPLX1O14810 134 aa15.11■□□□□ 0.01
SHKBP1-208ENST00000595726 CCNT1O60563 726 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-208ENST00000595726 USO1O60763 962 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-208ENST00000595726 RBM25P49756 843 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-208ENST00000595726 RARRES1P49788 294 aa15.11■□□□□ 0.01
SHKBP1-208ENST00000595726 EPHA5P54756 1037 aa15.11■□□□□ 0.01
SHKBP1-208ENST00000595726 CREB5Q02930 508 aa15.11■□□□□ 0.01
SHKBP1-208ENST00000595726 SCRN1Q12765 414 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms