RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 PRKD2Q9BZL6 878 aa19.27■□□□□ 0.68
SHKBP1-204ENST00000594862 WDR6Q9NNW5 1121 aaKnown RBP19.27■□□□□ 0.68
SHKBP1-204ENST00000594862 CLUHO75153 1309 aa19.26■□□□□ 0.67
SHKBP1-204ENST00000594862 C2CD4DB7Z1M9 353 aa19.26■□□□□ 0.67
SHKBP1-204ENST00000594862 ANKRD63C9JTQ0 380 aa19.26■□□□□ 0.67
SHKBP1-204ENST00000594862 GARTP22102 1010 aa19.26■□□□□ 0.67
SHKBP1-204ENST00000594862 OR1D2P34982 312 aa19.26■□□□□ 0.67
SHKBP1-204ENST00000594862 ASIC1P78348 528 aa19.26■□□□□ 0.67
SHKBP1-204ENST00000594862 TMEM132DQ14C87 1099 aa19.26■□□□□ 0.67
SHKBP1-204ENST00000594862 PPM1LQ5SGD2 360 aa19.26■□□□□ 0.67
SHKBP1-204ENST00000594862 VARS2Q5ST30 1063 aaKnown RBP19.26■□□□□ 0.67
SHKBP1-204ENST00000594862 SPATA1Q5VX52 437 aa19.26■□□□□ 0.67
SHKBP1-204ENST00000594862 SLC8B1Q6J4K2 584 aa19.26■□□□□ 0.67
SHKBP1-204ENST00000594862 ZNF280DQ6N043 979 aa19.26■□□□□ 0.67
SHKBP1-204ENST00000594862 TBC1D7Q9P0N9 293 aa19.26■□□□□ 0.67
SHKBP1-204ENST00000594862 CDH22Q9UJ99 828 aa19.26■□□□□ 0.67
SHKBP1-204ENST00000594862 MAFFQ9ULX9 164 aa19.26■□□□□ 0.67
SHKBP1-204ENST00000594862 PCDHB8Q9UN66 801 aa19.26■□□□□ 0.67
SHKBP1-204ENST00000594862 CDY1Q9Y6F8 540 aa19.26■□□□□ 0.67
SHKBP1-204ENST00000594862 C2orf16Q68DN1 1984 aa19.26■□□□□ 0.67
SHKBP1-204ENST00000594862 I3L4J1 428 aa19.25■□□□□ 0.67
SHKBP1-204ENST00000594862 POLR2DO15514 142 aaKnown RBP19.25■□□□□ 0.67
SHKBP1-204ENST00000594862 XYLBO75191 536 aa19.25■□□□□ 0.67
SHKBP1-204ENST00000594862 C8AP07357 584 aa19.25■□□□□ 0.67
SHKBP1-204ENST00000594862 MTMR3Q13615 1198 aa19.25■□□□□ 0.67
SHKBP1-204ENST00000594862 ZBTB41Q5SVQ8 909 aa19.25■□□□□ 0.67
SHKBP1-204ENST00000594862 KANK3Q6NY19 840 aa19.25■□□□□ 0.67
SHKBP1-204ENST00000594862 UBALD2Q8IYN6 164 aa19.25■□□□□ 0.67
SHKBP1-204ENST00000594862 CEP57L1Q8IYX8 460 aa19.25■□□□□ 0.67
SHKBP1-204ENST00000594862 ZNF707Q96C28 371 aaPredicted RBP19.25■□□□□ 0.67
SHKBP1-204ENST00000594862 FAM212AQ96EL1 285 aa19.25■□□□□ 0.67
SHKBP1-204ENST00000594862 C7orf25Q9BPX7 421 aa19.25■□□□□ 0.67
SHKBP1-204ENST00000594862 USP25Q9UHP3 1055 aa19.25■□□□□ 0.67
SHKBP1-204ENST00000594862 UBE4BO95155 1302 aa19.25■□□□□ 0.67
SHKBP1-204ENST00000594862 M0QZQ0 153 aa19.24■□□□□ 0.67
SHKBP1-204ENST00000594862 EIF3DO15371 548 aaKnown RBP eCLIP19.24■□□□□ 0.67
SHKBP1-204ENST00000594862 RFPL2O75678 378 aa19.24■□□□□ 0.67
SHKBP1-204ENST00000594862 SPATA31D3P0C874 917 aa19.24■□□□□ 0.67
SHKBP1-204ENST00000594862 MYBP10242 640 aa19.24■□□□□ 0.67
SHKBP1-204ENST00000594862 SP100P23497 879 aaPredicted RBP19.24■□□□□ 0.67
SHKBP1-204ENST00000594862 AARSP49588 968 aaKnown RBP eCLIP19.24■□□□□ 0.67
SHKBP1-204ENST00000594862 ACOT2P49753 483 aa19.24■□□□□ 0.67
SHKBP1-204ENST00000594862 ZXDAP98168 799 aa19.24■□□□□ 0.67
SHKBP1-204ENST00000594862 TPGS2Q68CL5 300 aa19.24■□□□□ 0.67
SHKBP1-204ENST00000594862 JADE1Q6IE81 842 aa19.24■□□□□ 0.67
SHKBP1-204ENST00000594862 SPATA31D4Q6ZUB0 917 aa19.24■□□□□ 0.67
SHKBP1-204ENST00000594862 SPATA32Q96LK8 384 aa19.24■□□□□ 0.67
SHKBP1-204ENST00000594862 SCAND2PQ9GZW5 306 aaPredicted RBP19.24■□□□□ 0.67
SHKBP1-204ENST00000594862 KCNH3Q9ULD8 1083 aa19.24■□□□□ 0.67
SHKBP1-204ENST00000594862 SORCS3Q9UPU3 1222 aa19.24■□□□□ 0.67
SHKBP1-204ENST00000594862 ZFP37Q9Y6Q3 630 aaPredicted RBP19.24■□□□□ 0.67
SHKBP1-204ENST00000594862 CASP5P51878 434 aa19.23■□□□□ 0.67
SHKBP1-204ENST00000594862 SPAG1Q07617 926 aa19.23■□□□□ 0.67
SHKBP1-204ENST00000594862 SIGLEC14Q08ET2 396 aa19.23■□□□□ 0.67
SHKBP1-204ENST00000594862 MRPL58Q14197 206 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-204ENST00000594862 CTXN3Q4LDR2 81 aa19.23■□□□□ 0.67
SHKBP1-204ENST00000594862 FAM26FQ5R3K3 315 aa19.23■□□□□ 0.67
SHKBP1-204ENST00000594862 UNC13DQ70J99 1090 aa19.23■□□□□ 0.67
SHKBP1-204ENST00000594862 USP37Q86T82 979 aa19.23■□□□□ 0.67
SHKBP1-204ENST00000594862 ZNF461Q8TAF7 563 aa19.23■□□□□ 0.67
SHKBP1-204ENST00000594862 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.23■□□□□ 0.671e-8■■■■■ 45.1
SHKBP1-204ENST00000594862 ANK1P16157 1881 aa19.22■□□□□ 0.67
SHKBP1-204ENST00000594862 PVALEFA0A1B0GWK0 134 aa19.22■□□□□ 0.67
SHKBP1-204ENST00000594862 TISP43B9A030 160 aa19.22■□□□□ 0.67
SHKBP1-204ENST00000594862 ADAM12O43184 909 aa19.22■□□□□ 0.67
SHKBP1-204ENST00000594862 MYL1P05976 194 aa19.22■□□□□ 0.67
SHKBP1-204ENST00000594862 NFICP08651 508 aa19.22■□□□□ 0.67
SHKBP1-204ENST00000594862 CMA1P23946 247 aa19.22■□□□□ 0.67
SHKBP1-204ENST00000594862 ADSSP30520 456 aa19.22■□□□□ 0.67
SHKBP1-204ENST00000594862 ELF1P32519 619 aa19.22■□□□□ 0.67
SHKBP1-204ENST00000594862 SNRPFP62306 86 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-204ENST00000594862 ROR1Q01973 937 aa19.22■□□□□ 0.67
SHKBP1-204ENST00000594862 YWHAHQ04917 246 aaPredicted RBP19.22■□□□□ 0.67
SHKBP1-204ENST00000594862 ARMCX5Q6P1M9 558 aa19.22■□□□□ 0.67
SHKBP1-204ENST00000594862 DSTYKQ6XUX3 929 aa19.22■□□□□ 0.67
SHKBP1-204ENST00000594862 TRIM67Q6ZTA4 783 aa19.22■□□□□ 0.67
SHKBP1-204ENST00000594862 BRSK2Q8IWQ3 736 aa19.22■□□□□ 0.67
SHKBP1-204ENST00000594862 SLC7A14Q8TBB6 771 aa19.22■□□□□ 0.67
SHKBP1-204ENST00000594862 LEO1Q8WVC0 666 aaPredicted RBP19.22■□□□□ 0.67
SHKBP1-204ENST00000594862 IGSF9Q9P2J2 1179 aa19.22■□□□□ 0.67
SHKBP1-204ENST00000594862 EXTL3O43909 919 aa19.21■□□□□ 0.67
SHKBP1-204ENST00000594862 TBC1D4O60343 1298 aa19.21■□□□□ 0.67
SHKBP1-204ENST00000594862 OAZ2O95190 189 aa19.21■□□□□ 0.67
SHKBP1-204ENST00000594862 SLFN14P0C7P3 912 aa19.21■□□□□ 0.67
SHKBP1-204ENST00000594862 ODC1P11926 461 aa19.21■□□□□ 0.67
SHKBP1-204ENST00000594862 TYMPP19971 482 aa19.21■□□□□ 0.67
SHKBP1-204ENST00000594862 IGFBP6P24592 240 aaPredicted RBP19.21■□□□□ 0.67
SHKBP1-204ENST00000594862 PNPLA4P41247 253 aa19.21■□□□□ 0.67
SHKBP1-204ENST00000594862 KCNA1Q09470 495 aa19.21■□□□□ 0.67
SHKBP1-204ENST00000594862 C9orf57Q5W0N0 161 aa19.21■□□□□ 0.67
SHKBP1-204ENST00000594862 BMP8AQ7Z5Y6 402 aa19.21■□□□□ 0.67
SHKBP1-204ENST00000594862 CACTINQ8WUQ7 758 aaKnown RBP19.21■□□□□ 0.67
SHKBP1-204ENST00000594862 NXPE3Q969Y0 559 aa19.21■□□□□ 0.67
SHKBP1-204ENST00000594862 MFSD14AQ96MC6 490 aa19.21■□□□□ 0.67
SHKBP1-204ENST00000594862 ZNF560Q96MR9 790 aa19.21■□□□□ 0.67
SHKBP1-204ENST00000594862 FAM213AQ9BRX8 229 aa19.21■□□□□ 0.67
SHKBP1-204ENST00000594862 KIAA1586Q9HCI6 787 aa19.21■□□□□ 0.67
SHKBP1-204ENST00000594862 RBAKQ9NYW8 714 aaPredicted RBP19.21■□□□□ 0.67
SHKBP1-204ENST00000594862 EPS15L1Q9UBC2 864 aa19.21■□□□□ 0.67
SHKBP1-204ENST00000594862 FBXL5Q9UKA1 691 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms