RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 ADORA2AP29274 412 aa16.41■□□□□ 0.22
PNKP-204ENST00000594661 ABCD1P33897 745 aa16.41■□□□□ 0.22
PNKP-204ENST00000594661 PRKCIP41743 596 aa16.41■□□□□ 0.22
PNKP-204ENST00000594661 MATR3P43243 847 aaKnown RBP eCLIP16.41■□□□□ 0.22
PNKP-204ENST00000594661 ARMCX2Q7L311 632 aa16.41■□□□□ 0.22
PNKP-204ENST00000594661 SLC7A3Q8WY07 619 aa16.41■□□□□ 0.22
PNKP-204ENST00000594661 CENPTQ96BT3 561 aa16.41■□□□□ 0.22
PNKP-204ENST00000594661 PTPN18Q99952 460 aa16.41■□□□□ 0.22
PNKP-204ENST00000594661 FAM167BQ9BTA0 163 aa16.41■□□□□ 0.22
PNKP-204ENST00000594661 TLR10Q9BXR5 811 aa16.41■□□□□ 0.22
PNKP-204ENST00000594661 NRBP2Q9NSY0 501 aa16.41■□□□□ 0.22
PNKP-204ENST00000594661 NFS1Q9Y697 457 aa16.41■□□□□ 0.22
PNKP-204ENST00000594661 PLXNA1Q9UIW2 1896 aa16.41■□□□□ 0.22
PNKP-204ENST00000594661 NOP56O00567 594 aaKnown RBP16.4■□□□□ 0.22
PNKP-204ENST00000594661 HNRNPDLO14979 420 aaKnown RBP16.4■□□□□ 0.22
PNKP-204ENST00000594661 MAPK13O15264 365 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 ARL2P36404 184 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 MXRA7P84157 204 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 SNRNP35Q16560 246 aaKnown RBP16.4■□□□□ 0.22
PNKP-204ENST00000594661 ZNF792Q3KQV3 632 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 C10orf76Q5T2E6 689 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 ANKS4BQ8N8V4 417 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 EIF1ADQ8N9N8 165 aaKnown RBP16.4■□□□□ 0.22
PNKP-204ENST00000594661 SPATA33Q96N06 139 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 AZI2Q9H6S1 392 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 RBM12Q9NTZ6 932 aaKnown RBP16.4■□□□□ 0.22
PNKP-204ENST00000594661 MORF4L1Q9UBU8 362 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 USP20Q9Y2K6 914 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 C2CD2Q9Y426 696 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 ASB14A6NK59 587 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 ASAP2O43150 1006 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 LGR5O75473 907 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 GFPT2O94808 682 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 TXNP10599 105 aaKnown RBP16.4■□□□□ 0.22
PNKP-204ENST00000594661 PAFAH1B1P43034 410 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 GCLMP48507 274 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 RUFY4Q6ZNE9 571 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 VPS36Q86VN1 386 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 LMO3Q8TAP4 145 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 GLG1Q92896 1179 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 CHMP6Q96FZ7 201 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 EPB41L5Q9HCM4 733 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 CNOT8Q9UFF9 292 aaKnown RBP16.4■□□□□ 0.22
PNKP-204ENST00000594661 TSKSQ9UJT2 592 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 NAGPAQ9UK23 515 aa16.4■□□□□ 0.22
PNKP-204ENST00000594661 LRRN2O75325 713 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 HEXIM1O94992 359 aaKnown RBP16.39■□□□□ 0.21
PNKP-204ENST00000594661 ATP2A2P16615 1042 aaKnown RBP16.39■□□□□ 0.21
PNKP-204ENST00000594661 RFC5P40937 340 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 STAT1P42224 750 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 USP4Q13107 963 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 DYNC1I2Q13409 638 aaKnown RBP16.39■□□□□ 0.21
PNKP-204ENST00000594661 TAF11Q15544 211 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 CST9Q5W186 159 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 ANO7Q6IWH7 933 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 ALKBH5Q6P6C2 394 aaKnown RBP16.39■□□□□ 0.21
PNKP-204ENST00000594661 ERICH1Q86X53 443 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 POMGNT1Q8WZA1 660 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 ZNF232Q9UNY5 417 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 LRRIQ4A6NIV6 560 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 EVI5O60447 810 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 FTCDO95954 541 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 ZBTB48P10074 688 aaPredicted RBP16.39■□□□□ 0.21
PNKP-204ENST00000594661 GUCY2FP51841 1108 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 TTLL4Q14679 1199 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 BRDTQ58F21 947 aaPredicted RBP16.39■□□□□ 0.21
PNKP-204ENST00000594661 PIGWQ7Z7B1 504 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 CASKIN2Q8WXE0 1202 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 TRIM4Q9C037 500 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 NMRK2Q9NPI5 230 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 RNF14Q9UBS8 474 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 APEX2Q9UBZ4 518 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 DNAJC12Q9UKB3 198 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 G3BP2Q9UN86 482 aaKnown RBP16.39■□□□□ 0.21
PNKP-204ENST00000594661 LRRC42Q9Y546 428 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 SIP14410 1827 aa16.39■□□□□ 0.21
PNKP-204ENST00000594661 GOLGA6L10A0A0M3HER8 536 aa16.38■□□□□ 0.21
PNKP-204ENST00000594661 A0A1B0GVG6 124 aa16.38■□□□□ 0.21
PNKP-204ENST00000594661 ZBTB42B2RXF5 422 aa16.38■□□□□ 0.21
PNKP-204ENST00000594661 F8VZ95 297 aa16.38■□□□□ 0.21
PNKP-204ENST00000594661 H0YCG3 227 aa16.38■□□□□ 0.21
PNKP-204ENST00000594661 MAFO75444 373 aaPredicted RBP16.38■□□□□ 0.21
PNKP-204ENST00000594661 ANXA13P27216 316 aa16.38■□□□□ 0.21
PNKP-204ENST00000594661 SOX5P35711 763 aa16.38■□□□□ 0.21
PNKP-204ENST00000594661 NAMPTP43490 491 aa16.38■□□□□ 0.21
PNKP-204ENST00000594661 GUCY2DQ02846 1103 aa16.38■□□□□ 0.21
PNKP-204ENST00000594661 ZNF844Q08AG5 666 aa16.38■□□□□ 0.21
PNKP-204ENST00000594661 GJC2Q5T442 439 aaPredicted RBP16.38■□□□□ 0.21
PNKP-204ENST00000594661 ERMARDQ5T6L9 678 aa16.38■□□□□ 0.21
PNKP-204ENST00000594661 SCFD2Q8WU76 684 aa16.38■□□□□ 0.21
PNKP-204ENST00000594661 FAM167AQ96KS9 214 aa16.38■□□□□ 0.21
PNKP-204ENST00000594661 FBXL18Q96ME1 805 aa16.38■□□□□ 0.21
PNKP-204ENST00000594661 STK33Q9BYT3 514 aa16.38■□□□□ 0.21
PNKP-204ENST00000594661 GPR88Q9GZN0 384 aa16.38■□□□□ 0.21
PNKP-204ENST00000594661 PIDD1Q9HB75 910 aa16.38■□□□□ 0.21
PNKP-204ENST00000594661 SMARCAL1Q9NZC9 954 aa16.38■□□□□ 0.21
PNKP-204ENST00000594661 WFS1O76024 890 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 DNA2P51530 1060 aa16.37■□□□□ 0.21
PNKP-204ENST00000594661 MCCD1P59942 119 aaPredicted RBP16.37■□□□□ 0.21
PNKP-204ENST00000594661 CAPSQ13938 189 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms