RNA–Protein interactions for RNA: ENST00000594372.1

SIN3B-204, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-204ENST00000594372 LMNB2Q03252 620 aa13.44□□□□□ -0.26
SIN3B-204ENST00000594372 CCDC6Q16204 474 aa13.44□□□□□ -0.26
SIN3B-204ENST00000594372 STXBP5Q5T5C0 1151 aa13.44□□□□□ -0.26
SIN3B-204ENST00000594372 PDZD4Q76G19 769 aaPredicted RBP13.44□□□□□ -0.26
SIN3B-204ENST00000594372 FAM3CQ92520 227 aa13.44□□□□□ -0.26
SIN3B-204ENST00000594372 WASF1Q92558 559 aa13.44□□□□□ -0.26
SIN3B-204ENST00000594372 SECISBP2LQ93073 1101 aaKnown RBP13.44□□□□□ -0.26
SIN3B-204ENST00000594372 ZFYVE19Q96K21 471 aa13.44□□□□□ -0.26
SIN3B-204ENST00000594372 ZBTB45Q96K62 511 aaPredicted RBP13.44□□□□□ -0.26
SIN3B-204ENST00000594372 PGLYRP2Q96PD5 576 aa13.44□□□□□ -0.26
SIN3B-204ENST00000594372 POLR3CQ9BUI4 534 aaPredicted RBP13.44□□□□□ -0.26
SIN3B-204ENST00000594372 TRMT61BQ9BVS5 477 aaKnown RBP13.44□□□□□ -0.26
SIN3B-204ENST00000594372 TARS2Q9BW92 718 aaKnown RBP13.44□□□□□ -0.26
SIN3B-204ENST00000594372 BHMT2Q9H2M3 363 aa13.44□□□□□ -0.26
SIN3B-204ENST00000594372 ZFP14Q9HCL3 533 aa13.44□□□□□ -0.26
SIN3B-204ENST00000594372 TUBGCP4Q9UGJ1 667 aa13.44□□□□□ -0.26
SIN3B-204ENST00000594372 TIMM13Q9Y5L4 95 aaPredicted RBP13.44□□□□□ -0.26
SIN3B-204ENST00000594372 NUP205Q92621 2012 aa13.44□□□□□ -0.26
SIN3B-204ENST00000594372 CCDC169A6NNP5 214 aa13.43□□□□□ -0.26
SIN3B-204ENST00000594372 PP2D1A8MPX8 630 aa13.43□□□□□ -0.26
SIN3B-204ENST00000594372 NCAM2O15394 837 aa13.43□□□□□ -0.26
SIN3B-204ENST00000594372 HRO43593 1189 aa13.43□□□□□ -0.26
SIN3B-204ENST00000594372 TBC1D4O60343 1298 aa13.43□□□□□ -0.26
SIN3B-204ENST00000594372 SOAT2O75908 522 aa13.43□□□□□ -0.26
SIN3B-204ENST00000594372 VNN2O95498 520 aa13.43□□□□□ -0.26
SIN3B-204ENST00000594372 CCT6AP40227 531 aaKnown RBP13.43□□□□□ -0.26
SIN3B-204ENST00000594372 MAGEA9P43362 315 aa13.43□□□□□ -0.26
SIN3B-204ENST00000594372 RBM25P49756 843 aaKnown RBP13.43□□□□□ -0.26
SIN3B-204ENST00000594372 PEX3P56589 373 aa13.43□□□□□ -0.26
SIN3B-204ENST00000594372 CTXN3Q4LDR2 81 aa13.43□□□□□ -0.26
SIN3B-204ENST00000594372 PPM1JQ5JR12 505 aa13.43□□□□□ -0.26
SIN3B-204ENST00000594372 SLC8B1Q6J4K2 584 aa13.43□□□□□ -0.26
SIN3B-204ENST00000594372 RNF19BQ6ZMZ0 732 aa13.43□□□□□ -0.26
SIN3B-204ENST00000594372 ZNF461Q8TAF7 563 aa13.43□□□□□ -0.26
SIN3B-204ENST00000594372 SHKBP1Q8TBC3 707 aa13.43□□□□□ -0.26
SIN3B-204ENST00000594372 ZSCAN18Q8TBC5 510 aaPredicted RBP13.43□□□□□ -0.26
SIN3B-204ENST00000594372 DNASE1L2Q92874 299 aa13.43□□□□□ -0.26
SIN3B-204ENST00000594372 CRISPLD1Q9H336 500 aa13.43□□□□□ -0.26
SIN3B-204ENST00000594372 MRPS17Q9Y2R5 130 aaKnown RBP13.43□□□□□ -0.26
SIN3B-204ENST00000594372 ABCA7Q8IZY2 2146 aa13.43□□□□□ -0.26
SIN3B-204ENST00000594372 KIAA1549LQ6ZVL6 1849 aa13.43□□□□□ -0.26
SIN3B-204ENST00000594372 HEPACAM2A8MVW5 462 aa13.42□□□□□ -0.26
SIN3B-204ENST00000594372 E9PMD0 336 aa13.42□□□□□ -0.26
SIN3B-204ENST00000594372 OR52Z1P0C646 297 aa13.42□□□□□ -0.26
SIN3B-204ENST00000594372 GRM5P41594 1212 aa13.42□□□□□ -0.26
SIN3B-204ENST00000594372 GUCY2FP51841 1108 aa13.42□□□□□ -0.26
SIN3B-204ENST00000594372 RAD51AP2Q09MP3 1159 aa13.42□□□□□ -0.26
SIN3B-204ENST00000594372 TXNDC11Q6PKC3 985 aa13.42□□□□□ -0.26
SIN3B-204ENST00000594372 ALKAL1Q6UXT8 129 aa13.42□□□□□ -0.26
SIN3B-204ENST00000594372 MAP4K3Q8IVH8 894 aa13.42□□□□□ -0.26
SIN3B-204ENST00000594372 TCEAL8Q8IYN2 117 aa13.42□□□□□ -0.26
SIN3B-204ENST00000594372 DAW1Q8N136 415 aa13.42□□□□□ -0.26
SIN3B-204ENST00000594372 SMARCD2Q92925 531 aa13.42□□□□□ -0.26
SIN3B-204ENST00000594372 IFT74Q96LB3 600 aa13.42□□□□□ -0.26
SIN3B-204ENST00000594372 UROC1Q96N76 676 aa13.42□□□□□ -0.26
SIN3B-204ENST00000594372 NELL2Q99435 816 aa13.42□□□□□ -0.26
SIN3B-204ENST00000594372 ACO2Q99798 780 aaKnown RBP13.42□□□□□ -0.26
SIN3B-204ENST00000594372 RUSC1Q9BVN2 902 aa13.42□□□□□ -0.26
SIN3B-204ENST00000594372 CCDC94Q9BW85 323 aaPredicted RBP13.42□□□□□ -0.26
SIN3B-204ENST00000594372 SLITRK6Q9H5Y7 841 aa13.42□□□□□ -0.26
SIN3B-204ENST00000594372 AVENQ9NQS1 362 aaPredicted RBP13.42□□□□□ -0.26
SIN3B-204ENST00000594372 POLR3BQ9NW08 1133 aaPredicted RBP13.42□□□□□ -0.26
SIN3B-204ENST00000594372 RAB23Q9ULC3 237 aa13.42□□□□□ -0.26
SIN3B-204ENST00000594372 KIAA1024Q9UPX6 916 aa13.42□□□□□ -0.26
SIN3B-204ENST00000594372 TNFSF13BQ9Y275 285 aa13.42□□□□□ -0.26
SIN3B-204ENST00000594372 NUB1Q9Y5A7 615 aa13.42□□□□□ -0.26
SIN3B-204ENST00000594372 LAMA1P25391 3075 aa13.42□□□□□ -0.26
SIN3B-204ENST00000594372 A0A1W2PRU2 124 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 SFI1A8K8P3 1242 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 PRR5-ARHGAP8B1AHC4 643 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 K7ERI5 159 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 ABLIM1O14639 778 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 ZNF263O14978 683 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 SLC16A4O15374 487 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 TRAPPC3O43617 180 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 HIP1RO75146 1068 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 CHRNB1P11230 501 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 CPB1P15086 417 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 ATF2P15336 505 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 PSMC3P17980 439 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 RPA1P27694 616 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 MCM4P33991 863 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 NPTX2P47972 431 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 PXNP49023 591 aaPredicted RBP13.41□□□□□ -0.26
SIN3B-204ENST00000594372 YARSP54577 528 aaKnown RBP13.41□□□□□ -0.26
SIN3B-204ENST00000594372 ARHGAP8P85298 464 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 TRIM29Q14134 588 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 SIM2Q14190 667 aaPredicted RBP13.41□□□□□ -0.26
SIN3B-204ENST00000594372 PPP2R5AQ15172 486 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 ST3GAL2Q16842 350 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 CYP4A22Q5TCH4 519 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 TTC9BQ8N6N2 239 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 ERMNQ8TAM6 284 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 TBC1D32Q96NH3 1257 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 LRRC3BQ96PB8 259 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 RTKNQ9BST9 563 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 PTPRHQ9HD43 1115 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 DDX19AQ9NUU7 478 aaKnown RBP13.41□□□□□ -0.26
SIN3B-204ENST00000594372 ANKFY1Q9P2R3 1169 aa13.41□□□□□ -0.26
SIN3B-204ENST00000594372 YIPF1Q9Y548 306 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms