RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 SF3B1O75533 1304 aaKnown RBP eCLIP21.22■□□□□ 0.996e-7■■■■■ 71.8
LSM4-203ENST00000593829 CXCL14O95715 111 aa21.21■□□□□ 0.99
LSM4-203ENST00000593829 SNRNP35Q16560 246 aaKnown RBP21.21■□□□□ 0.99
LSM4-203ENST00000593829 COBLL1Q53SF7 1204 aa21.21■□□□□ 0.99
LSM4-203ENST00000593829 SPATA1Q5VX52 437 aa21.21■□□□□ 0.99
LSM4-203ENST00000593829 NT5DC4Q86YG4 428 aa21.21■□□□□ 0.99
LSM4-203ENST00000593829 RNF168Q8IYW5 571 aaPredicted RBP21.21■□□□□ 0.99
LSM4-203ENST00000593829 HERC2P3Q9BVR0 1158 aa21.21■□□□□ 0.99
LSM4-203ENST00000593829 GPR62Q9BZJ7 368 aa21.21■□□□□ 0.99
LSM4-203ENST00000593829 TRAF3IP3Q9Y228 551 aa21.21■□□□□ 0.99
LSM4-203ENST00000593829 PDCD11Q14690 1871 aaKnown RBP21.21■□□□□ 0.99
LSM4-203ENST00000593829 EXOC3O60645 756 aa21.21■□□□□ 0.99
LSM4-203ENST00000593829 SLC34A2O95436 690 aa21.21■□□□□ 0.99
LSM4-203ENST00000593829 PRCPP42785 496 aa21.21■□□□□ 0.99
LSM4-203ENST00000593829 SKIV2LQ15477 1246 aaKnown RBP21.21■□□□□ 0.99
LSM4-203ENST00000593829 STX1AQ16623 288 aa21.21■□□□□ 0.99
LSM4-203ENST00000593829 ISM2Q6H9L7 571 aa21.21■□□□□ 0.99
LSM4-203ENST00000593829 TAS1R1Q7RTX1 841 aa21.21■□□□□ 0.99
LSM4-203ENST00000593829 SLC9A9Q8IVB4 645 aa21.21■□□□□ 0.99
LSM4-203ENST00000593829 MRPL43Q8N983 215 aaKnown RBP21.21■□□□□ 0.99
LSM4-203ENST00000593829 RDH13Q8NBN7 331 aa21.21■□□□□ 0.99
LSM4-203ENST00000593829 CCDC112Q8NEF3 446 aa21.21■□□□□ 0.99
LSM4-203ENST00000593829 NR3C1P04150 777 aa21.2■□□□□ 0.98
LSM4-203ENST00000593829 LRPAP1P30533 357 aa21.2■□□□□ 0.98
LSM4-203ENST00000593829 CA8P35219 290 aa21.2■□□□□ 0.98
LSM4-203ENST00000593829 ELAVL2Q12926 359 aaKnown RBP21.2■□□□□ 0.98
LSM4-203ENST00000593829 MYBPC2Q14324 1141 aa21.2■□□□□ 0.98
LSM4-203ENST00000593829 SURF1Q15526 300 aa21.2■□□□□ 0.98
LSM4-203ENST00000593829 C3orf58Q8NDZ4 430 aa21.2■□□□□ 0.98
LSM4-203ENST00000593829 PDE11AQ9HCR9 933 aa21.2■□□□□ 0.98
LSM4-203ENST00000593829 DMAC2Q9NW81 257 aa21.2■□□□□ 0.98
LSM4-203ENST00000593829 KIAA1468Q9P260 1216 aa21.2■□□□□ 0.98
LSM4-203ENST00000593829 IRAK3Q9Y616 596 aa21.2■□□□□ 0.98
LSM4-203ENST00000593829 EYSQ5T1H1 3165 aa21.2■□□□□ 0.98
LSM4-203ENST00000593829 COL6A3P12111 3177 aa21.2■□□□□ 0.98
LSM4-203ENST00000593829 HIDE1A8MVS5 230 aa21.19■□□□□ 0.98
LSM4-203ENST00000593829 GOLGA6L19H0YKK7 550 aa21.19■□□□□ 0.98
LSM4-203ENST00000593829 TRAPPC3O43617 180 aa21.19■□□□□ 0.98
LSM4-203ENST00000593829 WNT7BP56706 349 aa21.19■□□□□ 0.98
LSM4-203ENST00000593829 USP41Q3LFD5 358 aa21.19■□□□□ 0.98
LSM4-203ENST00000593829 KIAA1841Q6NSI8 718 aa21.19■□□□□ 0.98
LSM4-203ENST00000593829 CD300LGQ6UXG3 332 aa21.19■□□□□ 0.98
LSM4-203ENST00000593829 ADGRD2Q7Z7M1 963 aa21.19■□□□□ 0.98
LSM4-203ENST00000593829 LRRC8AQ8IWT6 810 aa21.19■□□□□ 0.98
LSM4-203ENST00000593829 C16orf45Q96MC5 204 aaPredicted RBP21.19■□□□□ 0.98
LSM4-203ENST00000593829 TLE6Q9H808 572 aa21.19■□□□□ 0.98
LSM4-203ENST00000593829 MRPL17Q9NRX2 175 aaKnown RBP21.19■□□□□ 0.98
LSM4-203ENST00000593829 SSX2IPQ9Y2D8 614 aa21.19■□□□□ 0.98
LSM4-203ENST00000593829 ATG2AQ2TAZ0 1938 aa21.19■□□□□ 0.98
LSM4-203ENST00000593829 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.19■□□□□ 0.98
LSM4-203ENST00000593829 C2orf71A6NGG8 1288 aa21.19■□□□□ 0.98
LSM4-203ENST00000593829 URODP06132 367 aa21.19■□□□□ 0.98
LSM4-203ENST00000593829 IGFBP6P24592 240 aaPredicted RBP21.19■□□□□ 0.98
LSM4-203ENST00000593829 GLUD2P49448 558 aa21.19■□□□□ 0.98
LSM4-203ENST00000593829 GUCY2FP51841 1108 aa21.19■□□□□ 0.98
LSM4-203ENST00000593829 HYAL1Q12794 435 aa21.19■□□□□ 0.98
LSM4-203ENST00000593829 MORC3Q14149 939 aa21.19■□□□□ 0.98
LSM4-203ENST00000593829 NFIL3Q16649 462 aa21.19■□□□□ 0.98
LSM4-203ENST00000593829 RBM23Q86U06 439 aaKnown RBP21.19■□□□□ 0.98
LSM4-203ENST00000593829 EFCAB13Q8IY85 973 aa21.19■□□□□ 0.98
LSM4-203ENST00000593829 AUTS2Q8WXX7 1259 aa21.19■□□□□ 0.98
LSM4-203ENST00000593829 CHST7Q9NS84 486 aa21.19■□□□□ 0.98
LSM4-203ENST00000593829 NUB1Q9Y5A7 615 aa21.19■□□□□ 0.98
LSM4-203ENST00000593829 ANK1P16157 1881 aa21.18■□□□□ 0.98
LSM4-203ENST00000593829 BIN1O00499 593 aa21.18■□□□□ 0.98
LSM4-203ENST00000593829 NCK2O43639 380 aa21.18■□□□□ 0.98
LSM4-203ENST00000593829 NRIP1P48552 1158 aa21.18■□□□□ 0.98
LSM4-203ENST00000593829 TFAMQ00059 246 aaKnown RBP21.18■□□□□ 0.98
LSM4-203ENST00000593829 GABPB1Q06547 395 aaPredicted RBP21.18■□□□□ 0.98
LSM4-203ENST00000593829 STIM1Q13586 685 aa21.18■□□□□ 0.98
LSM4-203ENST00000593829 PTPN14Q15678 1187 aa21.18■□□□□ 0.98
LSM4-203ENST00000593829 TPD52L1Q16890 204 aaPredicted RBP21.18■□□□□ 0.98
LSM4-203ENST00000593829 FAM171A1Q5VUB5 890 aa21.18■□□□□ 0.98
LSM4-203ENST00000593829 ADSSL1Q8N142 457 aa21.18■□□□□ 0.98
LSM4-203ENST00000593829 TMEM130Q8N3G9 435 aa21.18■□□□□ 0.98
LSM4-203ENST00000593829 IGFLR1Q9H665 355 aa21.18■□□□□ 0.98
LSM4-203ENST00000593829 DPP3Q9NY33 737 aa21.18■□□□□ 0.98
LSM4-203ENST00000593829 RPL13P26373 211 aaKnown RBP21.17■□□□□ 0.98
LSM4-203ENST00000593829 PPP1R2P41236 205 aa21.17■□□□□ 0.98
LSM4-203ENST00000593829 DSG1Q02413 1049 aa21.17■□□□□ 0.98
LSM4-203ENST00000593829 CYP24A1Q07973 514 aa21.17■□□□□ 0.98
LSM4-203ENST00000593829 ZCWPW2Q504Y3 356 aa21.17■□□□□ 0.98
LSM4-203ENST00000593829 KIAA0319Q5VV43 1072 aa21.17■□□□□ 0.98
LSM4-203ENST00000593829 NYAP1Q6ZVC0 841 aa21.17■□□□□ 0.98
LSM4-203ENST00000593829 MFSD14AQ96MC6 490 aa21.17■□□□□ 0.98
LSM4-203ENST00000593829 CDCA3Q99618 268 aaPredicted RBP21.17■□□□□ 0.98
LSM4-203ENST00000593829 MYO7AQ13402 2215 aa21.17■□□□□ 0.98
LSM4-203ENST00000593829 REV3LO60673 3130 aa21.17■□□□□ 0.98
LSM4-203ENST00000593829 C2CD2LO14523 706 aa21.17■□□□□ 0.98
LSM4-203ENST00000593829 PER2O15055 1255 aa21.17■□□□□ 0.98
LSM4-203ENST00000593829 NR2F2P24468 414 aa21.17■□□□□ 0.98
LSM4-203ENST00000593829 BRCC3P46736 316 aa21.17■□□□□ 0.98
LSM4-203ENST00000593829 PSMD6Q15008 389 aa21.17■□□□□ 0.98
LSM4-203ENST00000593829 EDRF1Q3B7T1 1238 aa21.17■□□□□ 0.98
LSM4-203ENST00000593829 CEP135Q66GS9 1140 aa21.17■□□□□ 0.98
LSM4-203ENST00000593829 GPR65Q8IYL9 337 aa21.17■□□□□ 0.98
LSM4-203ENST00000593829 TRIML1Q8N9V2 468 aa21.17■□□□□ 0.98
LSM4-203ENST00000593829 B3GALT6Q96L58 329 aa21.17■□□□□ 0.98
LSM4-203ENST00000593829 FNBP1Q96RU3 617 aa21.17■□□□□ 0.98
LSM4-203ENST00000593829 TTPALQ9BTX7 342 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms