RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 NSUN3Q9H649 340 aaKnown RBP16.14■□□□□ 0.17
DDX39A-221ENST00000593026 DACH1Q9UI36 760 aa16.14■□□□□ 0.17
DDX39A-221ENST00000593026 ITGA11Q9UKX5 1188 aa16.14■□□□□ 0.17
DDX39A-221ENST00000593026 PCDHGC5Q9Y5F6 944 aa16.14■□□□□ 0.17
DDX39A-221ENST00000593026 ANO9A1A5B4 782 aa16.13■□□□□ 0.17
DDX39A-221ENST00000593026 PPEF2O14830 753 aa16.13■□□□□ 0.17
DDX39A-221ENST00000593026 SLC16A3O15427 465 aaKnown RBP16.13■□□□□ 0.17
DDX39A-221ENST00000593026 ITGB3P05106 788 aa16.13■□□□□ 0.17
DDX39A-221ENST00000593026 URODP06132 367 aa16.13■□□□□ 0.17
DDX39A-221ENST00000593026 CTSAP10619 480 aa16.13■□□□□ 0.17
DDX39A-221ENST00000593026 BRCC3P46736 316 aa16.13■□□□□ 0.17
DDX39A-221ENST00000593026 GLUD2P49448 558 aa16.13■□□□□ 0.17
DDX39A-221ENST00000593026 USP41Q3LFD5 358 aa16.13■□□□□ 0.17
DDX39A-221ENST00000593026 FAM171A1Q5VUB5 890 aa16.13■□□□□ 0.17
DDX39A-221ENST00000593026 TAS1R1Q7RTX1 841 aa16.13■□□□□ 0.17
DDX39A-221ENST00000593026 CSGALNACT2Q8N6G5 542 aa16.13■□□□□ 0.17
DDX39A-221ENST00000593026 C1orf127Q8N9H9 656 aa16.13■□□□□ 0.17
DDX39A-221ENST00000593026 TMC2Q8TDI7 906 aa16.13■□□□□ 0.17
DDX39A-221ENST00000593026 PPP2R3CQ969Q6 453 aa16.13■□□□□ 0.17
DDX39A-221ENST00000593026 CEP63Q96MT8 703 aa16.13■□□□□ 0.17
DDX39A-221ENST00000593026 DUSP9Q99956 384 aaKnown RBP16.13■□□□□ 0.17
DDX39A-221ENST00000593026 GZF1Q9H116 711 aaPredicted RBP16.13■□□□□ 0.17
DDX39A-221ENST00000593026 RWDD2AQ9UIY3 292 aa16.13■□□□□ 0.17
DDX39A-221ENST00000593026 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.12■□□□□ 0.17
DDX39A-221ENST00000593026 LRRIQ3A6PVS8 624 aaPredicted RBP16.12■□□□□ 0.17
DDX39A-221ENST00000593026 I3L4J1 428 aa16.12■□□□□ 0.17
DDX39A-221ENST00000593026 PIRO00625 290 aa16.12■□□□□ 0.17
DDX39A-221ENST00000593026 CXCL14O95715 111 aa16.12■□□□□ 0.17
DDX39A-221ENST00000593026 KRT19P08727 400 aa16.12■□□□□ 0.17
DDX39A-221ENST00000593026 POLR2BP30876 1174 aaKnown RBP16.12■□□□□ 0.17
DDX39A-221ENST00000593026 VAMP7P51809 220 aa16.12■□□□□ 0.17
DDX39A-221ENST00000593026 BFSP1Q12934 665 aa16.12■□□□□ 0.17
DDX39A-221ENST00000593026 PTPN14Q15678 1187 aa16.12■□□□□ 0.17
DDX39A-221ENST00000593026 SKOR2Q2VWA4 1001 aaPredicted RBP16.12■□□□□ 0.17
DDX39A-221ENST00000593026 TCEAL5Q5H9L2 206 aa16.12■□□□□ 0.17
DDX39A-221ENST00000593026 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.12■□□□□ 0.17
DDX39A-221ENST00000593026 CEP57Q86XR8 500 aa16.12■□□□□ 0.17
DDX39A-221ENST00000593026 MRPL43Q8N983 215 aaKnown RBP16.12■□□□□ 0.17
DDX39A-221ENST00000593026 AUTS2Q8WXX7 1259 aa16.12■□□□□ 0.17
DDX39A-221ENST00000593026 B3GALT6Q96L58 329 aa16.12■□□□□ 0.17
DDX39A-221ENST00000593026 ZNF560Q96MR9 790 aa16.12■□□□□ 0.17
DDX39A-221ENST00000593026 TTPALQ9BTX7 342 aa16.12■□□□□ 0.17
DDX39A-221ENST00000593026 MRPL17Q9NRX2 175 aaKnown RBP16.12■□□□□ 0.17
DDX39A-221ENST00000593026 AGAP1Q9UPQ3 857 aa16.12■□□□□ 0.17
DDX39A-221ENST00000593026 SSX2IPQ9Y2D8 614 aa16.12■□□□□ 0.17
DDX39A-221ENST00000593026 R3HCC1Q9Y3T6 440 aaKnown RBP16.12■□□□□ 0.17
DDX39A-221ENST00000593026 HIDE1A8MVS5 230 aa16.11■□□□□ 0.17
DDX39A-221ENST00000593026 C2CD2LO14523 706 aa16.11■□□□□ 0.17
DDX39A-221ENST00000593026 PAX3P23760 479 aa16.11■□□□□ 0.17
DDX39A-221ENST00000593026 PNPLA4P41247 253 aa16.11■□□□□ 0.17
DDX39A-221ENST00000593026 TAF6P49848 677 aa16.11■□□□□ 0.17
DDX39A-221ENST00000593026 AP3M2P53677 418 aa16.11■□□□□ 0.17
DDX39A-221ENST00000593026 LILRA4P59901 499 aa16.11■□□□□ 0.17
DDX39A-221ENST00000593026 DLG4P78352 724 aa16.11■□□□□ 0.17
DDX39A-221ENST00000593026 CLDN10P78369 228 aa16.11■□□□□ 0.17
DDX39A-221ENST00000593026 RBP5P82980 135 aa16.11■□□□□ 0.17
DDX39A-221ENST00000593026 DSG1Q02413 1049 aa16.11■□□□□ 0.17
DDX39A-221ENST00000593026 ENPEPQ07075 957 aa16.11■□□□□ 0.17
DDX39A-221ENST00000593026 CCDC85BQ15834 202 aaPredicted RBP16.11■□□□□ 0.17
DDX39A-221ENST00000593026 STX1AQ16623 288 aa16.11■□□□□ 0.17
DDX39A-221ENST00000593026 SV2CQ496J9 727 aa16.11■□□□□ 0.17
DDX39A-221ENST00000593026 TRAPPC11Q7Z392 1133 aa16.11■□□□□ 0.17
DDX39A-221ENST00000593026 ADGRD2Q7Z7M1 963 aa16.11■□□□□ 0.17
DDX39A-221ENST00000593026 LRRC52Q8N7C0 313 aa16.11■□□□□ 0.17
DDX39A-221ENST00000593026 MAFAQ8NHW3 353 aaPredicted RBP16.11■□□□□ 0.17
DDX39A-221ENST00000593026 ZNF516Q92618 1163 aa16.11■□□□□ 0.17
DDX39A-221ENST00000593026 SUSD3Q96L08 255 aa16.11■□□□□ 0.17
DDX39A-221ENST00000593026 CHST7Q9NS84 486 aa16.11■□□□□ 0.17
DDX39A-221ENST00000593026 SIX4Q9UIU6 781 aa16.11■□□□□ 0.17
DDX39A-221ENST00000593026 IRAK3Q9Y616 596 aa16.11■□□□□ 0.17
DDX39A-221ENST00000593026 PRRC2BQ5JSZ5 2229 aaKnown RBP16.11■□□□□ 0.17
DDX39A-221ENST00000593026 C2orf71A6NGG8 1288 aa16.1■□□□□ 0.17
DDX39A-221ENST00000593026 IKBKBO14920 756 aa16.1■□□□□ 0.17
DDX39A-221ENST00000593026 SPTLC1O15269 473 aa16.1■□□□□ 0.17
DDX39A-221ENST00000593026 PHACTR2O75167 634 aa16.1■□□□□ 0.17
DDX39A-221ENST00000593026 TRIM49P0CI25 452 aa16.1■□□□□ 0.17
DDX39A-221ENST00000593026 TRIM49CP0CI26 452 aa16.1■□□□□ 0.17
DDX39A-221ENST00000593026 FGFR3P22607 806 aa16.1■□□□□ 0.17
DDX39A-221ENST00000593026 ERCC5P28715 1186 aaPredicted RBP16.1■□□□□ 0.17
DDX39A-221ENST00000593026 TKTP29401 623 aaKnown RBP16.1■□□□□ 0.17
DDX39A-221ENST00000593026 AARSP49588 968 aaKnown RBP eCLIP16.1■□□□□ 0.17
DDX39A-221ENST00000593026 BIRC3Q13489 604 aa16.1■□□□□ 0.17
DDX39A-221ENST00000593026 CCDC40Q4G0X9 1142 aa16.1■□□□□ 0.17
DDX39A-221ENST00000593026 CT47A1Q5JQC4 288 aaPredicted RBP16.1■□□□□ 0.17
DDX39A-221ENST00000593026 RTP2Q5QGT7 225 aa16.1■□□□□ 0.17
DDX39A-221ENST00000593026 KIAA0319Q5VV43 1072 aa16.1■□□□□ 0.17
DDX39A-221ENST00000593026 DSTYKQ6XUX3 929 aa16.1■□□□□ 0.17
DDX39A-221ENST00000593026 FILIP1Q7Z7B0 1213 aa16.1■□□□□ 0.17
DDX39A-221ENST00000593026 CXorf38Q8TB03 319 aa16.1■□□□□ 0.17
DDX39A-221ENST00000593026 PPM1EQ8WY54 764 aa16.1■□□□□ 0.17
DDX39A-221ENST00000593026 RIN2Q8WYP3 895 aaPredicted RBP16.1■□□□□ 0.17
DDX39A-221ENST00000593026 BORCS6Q96GS4 357 aa16.1■□□□□ 0.17
DDX39A-221ENST00000593026 SRRTQ9BXP5 876 aaKnown RBP16.1■□□□□ 0.17
DDX39A-221ENST00000593026 TLE6Q9H808 572 aa16.1■□□□□ 0.17
DDX39A-221ENST00000593026 ANO10Q9NW15 660 aa16.1■□□□□ 0.17
DDX39A-221ENST00000593026 M0QZQ0 153 aa16.09■□□□□ 0.17
DDX39A-221ENST00000593026 SYN3O14994 580 aa16.09■□□□□ 0.17
DDX39A-221ENST00000593026 FGFR1OPO95684 399 aaKnown RBP16.09■□□□□ 0.17
DDX39A-221ENST00000593026 NRIP1P48552 1158 aa16.09■□□□□ 0.17
DDX39A-221ENST00000593026 CREMQ03060 361 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms