RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 NUMBLQ9Y6R0 609 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 MYO15AQ9UKN7 3530 aa10.38□□□□□ -0.75
BRCA1-226ENST00000591534 PHLPP2Q6ZVD8 1323 aa10.37□□□□□ -0.75
BRCA1-226ENST00000591534 CASTOR2A6NHX0 329 aa10.37□□□□□ -0.75
BRCA1-226ENST00000591534 BTBD18B2RXH4 712 aa10.37□□□□□ -0.75
BRCA1-226ENST00000591534 ACKR2O00590 384 aa10.37□□□□□ -0.75
BRCA1-226ENST00000591534 WNT7AO00755 349 aa10.37□□□□□ -0.75
BRCA1-226ENST00000591534 NCAM2O15394 837 aa10.37□□□□□ -0.75
BRCA1-226ENST00000591534 CD2BP2O95400 341 aaKnown RBP10.37□□□□□ -0.75
BRCA1-226ENST00000591534 C8AP07357 584 aa10.37□□□□□ -0.75
BRCA1-226ENST00000591534 POU2F2P09086 479 aa10.37□□□□□ -0.75
BRCA1-226ENST00000591534 RPL17P18621 184 aaKnown RBP10.37□□□□□ -0.75
BRCA1-226ENST00000591534 MAGEA9P43362 315 aa10.37□□□□□ -0.75
BRCA1-226ENST00000591534 NAMPTP43490 491 aa10.37□□□□□ -0.75
BRCA1-226ENST00000591534 YARSP54577 528 aaKnown RBP10.37□□□□□ -0.75
BRCA1-226ENST00000591534 PRKCQQ04759 706 aa10.37□□□□□ -0.75
BRCA1-226ENST00000591534 DPYDQ12882 1025 aa10.37□□□□□ -0.75
BRCA1-226ENST00000591534 SPECC1Q5M775 1068 aa10.37□□□□□ -0.75
BRCA1-226ENST00000591534 RSPO2Q6UXX9 243 aaPredicted RBP10.37□□□□□ -0.75
BRCA1-226ENST00000591534 GRASPQ7Z6J2 395 aaPredicted RBP10.37□□□□□ -0.75
BRCA1-226ENST00000591534 C1orf210Q8IVY1 113 aa10.37□□□□□ -0.75
BRCA1-226ENST00000591534 MTMR9Q96QG7 549 aa10.37□□□□□ -0.75
BRCA1-226ENST00000591534 HINFPQ9BQA5 517 aa10.37□□□□□ -0.75
BRCA1-226ENST00000591534 TOPORSQ9NS56 1045 aaPredicted RBP10.37□□□□□ -0.75
BRCA1-226ENST00000591534 SNTG2Q9NY99 539 aa10.37□□□□□ -0.75
BRCA1-226ENST00000591534 POLIQ9UNA4 740 aa10.37□□□□□ -0.75
BRCA1-226ENST00000591534 PTPRZ1P23471 2315 aaPredicted RBP10.36□□□□□ -0.75
BRCA1-226ENST00000591534 F8W810 466 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 B3GAT3O94766 335 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 KIF4AO95239 1232 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 PRKCBP05771 671 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 CYP11B2P19099 503 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 PDCP20941 246 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 RPA1P27694 616 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 ELF1P32519 619 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 MCM7P33993 719 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 STARD6P59095 220 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 GNL2Q13823 731 aaKnown RBP10.36□□□□□ -0.75
BRCA1-226ENST00000591534 RAB33AQ14088 237 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 INTS6LQ5JSJ4 861 aaKnown RBP10.36□□□□□ -0.75
BRCA1-226ENST00000591534 RTP2Q5QGT7 225 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 PRSS55Q6UWB4 352 aaPredicted RBP10.36□□□□□ -0.75
BRCA1-226ENST00000591534 ANKS3Q6ZW76 656 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 CDR2LQ86X02 465 aaPredicted RBP10.36□□□□□ -0.75
BRCA1-226ENST00000591534 CATSPER3Q86XQ3 398 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 ANKMY2Q8IV38 441 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 PJA1Q8NG27 643 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 LNX1Q8TBB1 728 aaPredicted RBP10.36□□□□□ -0.75
BRCA1-226ENST00000591534 FAM200AQ8TCP9 573 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 HASPINQ8TF76 798 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 KIFAP3Q92845 792 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 SECISBP2LQ93073 1101 aaKnown RBP10.36□□□□□ -0.75
BRCA1-226ENST00000591534 NELL2Q99435 816 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 CLSTN3Q9BQT9 956 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 OSBPL6Q9BZF3 934 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 RAB34Q9BZG1 259 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 GZF1Q9H116 711 aaPredicted RBP10.36□□□□□ -0.75
BRCA1-226ENST00000591534 PDZD7Q9H5P4 517 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 GPRC5CQ9NQ84 441 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 SLC38A7Q9NVC3 462 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 DNAAF2Q9NVR5 837 aaKnown RBP10.36□□□□□ -0.75
BRCA1-226ENST00000591534 KCNG1Q9UIX4 513 aa10.36□□□□□ -0.75
BRCA1-226ENST00000591534 MRPS17Q9Y2R5 130 aaKnown RBP10.36□□□□□ -0.75
BRCA1-226ENST00000591534 KANSL1LA0AUZ9 987 aa10.35□□□□□ -0.75
BRCA1-226ENST00000591534 TMEM189-UBE2V1I3L0A0 370 aa10.35□□□□□ -0.75
BRCA1-226ENST00000591534 K7ERI5 159 aa10.35□□□□□ -0.75
BRCA1-226ENST00000591534 LAMTOR5O43504 91 aa10.35□□□□□ -0.75
BRCA1-226ENST00000591534 KINO60870 393 aaKnown RBP10.35□□□□□ -0.75
BRCA1-226ENST00000591534 RECQL4O94761 1208 aa10.35□□□□□ -0.75
BRCA1-226ENST00000591534 DCNP07585 359 aaKnown RBP10.35□□□□□ -0.75
BRCA1-226ENST00000591534 OR52Z1P0C646 297 aa10.35□□□□□ -0.75
BRCA1-226ENST00000591534 SPATA31C1P0DKV0 1188 aa10.35□□□□□ -0.75
BRCA1-226ENST00000591534 LIG1P18858 919 aa10.35□□□□□ -0.75
BRCA1-226ENST00000591534 SDHBP21912 280 aa10.35□□□□□ -0.75
BRCA1-226ENST00000591534 OR1D2P34982 312 aa10.35□□□□□ -0.75
BRCA1-226ENST00000591534 ZNF528Q3MIS6 628 aa10.35□□□□□ -0.75
BRCA1-226ENST00000591534 PABPC1LQ4VXU2 614 aaKnown RBP10.35□□□□□ -0.75
BRCA1-226ENST00000591534 AXDND1Q5T1B0 1012 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-226ENST00000591534 CCDC83Q8IWF9 413 aa10.35□□□□□ -0.75
BRCA1-226ENST00000591534 GPR161Q8N6U8 529 aaKnown RBP10.35□□□□□ -0.75
BRCA1-226ENST00000591534 SLC7A14Q8TBB6 771 aa10.35□□□□□ -0.75
BRCA1-226ENST00000591534 FEZF2Q8TBJ5 459 aa10.35□□□□□ -0.75
BRCA1-226ENST00000591534 RUBCNQ92622 972 aa10.35□□□□□ -0.75
BRCA1-226ENST00000591534 RABGGTAQ92696 567 aa10.35□□□□□ -0.75
BRCA1-226ENST00000591534 FGF13Q92913 245 aa10.35□□□□□ -0.75
BRCA1-226ENST00000591534 CCDC94Q9BW85 323 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-226ENST00000591534 GDE1Q9NZC3 331 aa10.35□□□□□ -0.75
BRCA1-226ENST00000591534 NOL7Q9UMY1 257 aaKnown RBP10.35□□□□□ -0.75
BRCA1-226ENST00000591534 BACE2Q9Y5Z0 518 aa10.35□□□□□ -0.75
BRCA1-226ENST00000591534 MYO10Q9HD67 2058 aa10.35□□□□□ -0.75
BRCA1-226ENST00000591534 ARID2Q68CP9 1835 aa10.35□□□□□ -0.75
BRCA1-226ENST00000591534 VPS13AQ96RL7 3174 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 H7C4K7 107 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 ERVH48-1M5A8F1 160 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 PTGESO14684 152 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 ZNF197O14709 1029 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 CCL16O15467 120 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 LRG1P02750 347 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 SP9P0CG40 484 aa10.34□□□□□ -0.75
BRCA1-226ENST00000591534 FGFR3P22607 806 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms