RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 MCM4P33991 863 aa12.49□□□□□ -0.41
VMP1-211ENST00000591315 CLCN4P51793 760 aa12.49□□□□□ -0.41
VMP1-211ENST00000591315 TFAMQ00059 246 aaKnown RBP12.49□□□□□ -0.41
VMP1-211ENST00000591315 BMS1Q14692 1282 aaKnown RBP12.49□□□□□ -0.41
VMP1-211ENST00000591315 PSMD5Q16401 504 aa12.49□□□□□ -0.41
VMP1-211ENST00000591315 RARS2Q5T160 578 aaKnown RBP12.49□□□□□ -0.41
VMP1-211ENST00000591315 C9orf57Q5W0N0 161 aa12.49□□□□□ -0.41
VMP1-211ENST00000591315 ISM2Q6H9L7 571 aa12.49□□□□□ -0.41
VMP1-211ENST00000591315 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.49□□□□□ -0.41
VMP1-211ENST00000591315 GPD1LQ8N335 351 aa12.49□□□□□ -0.41
VMP1-211ENST00000591315 OR5B17Q8NGF7 314 aa12.49□□□□□ -0.41
VMP1-211ENST00000591315 PLEKHO2Q8TD55 490 aa12.49□□□□□ -0.41
VMP1-211ENST00000591315 PIK3R5Q8WYR1 880 aa12.49□□□□□ -0.41
VMP1-211ENST00000591315 POP1Q99575 1024 aaKnown RBP12.49□□□□□ -0.41
VMP1-211ENST00000591315 EMILIN2Q9BXX0 1053 aa12.49□□□□□ -0.41
VMP1-211ENST00000591315 GZF1Q9H116 711 aaPredicted RBP12.49□□□□□ -0.41
VMP1-211ENST00000591315 S1PR5Q9H228 398 aa12.49□□□□□ -0.41
VMP1-211ENST00000591315 ASB7Q9H672 318 aa12.49□□□□□ -0.41
VMP1-211ENST00000591315 CD320Q9NPF0 282 aa12.49□□□□□ -0.41
VMP1-211ENST00000591315 DPP3Q9NY33 737 aa12.49□□□□□ -0.41
VMP1-211ENST00000591315 NUB1Q9Y5A7 615 aa12.49□□□□□ -0.41
VMP1-211ENST00000591315 PCDHA5Q9Y5H7 936 aa12.49□□□□□ -0.41
VMP1-211ENST00000591315 MTCL1Q9Y4B5 1905 aaKnown RBP12.49□□□□□ -0.41
VMP1-211ENST00000591315 ANO9A1A5B4 782 aa12.48□□□□□ -0.41
VMP1-211ENST00000591315 PIRO00625 290 aa12.48□□□□□ -0.41
VMP1-211ENST00000591315 IL18RAPO95256 599 aa12.48□□□□□ -0.41
VMP1-211ENST00000591315 MYL1P05976 194 aa12.48□□□□□ -0.41
VMP1-211ENST00000591315 CYP3A5P20815 502 aa12.48□□□□□ -0.41
VMP1-211ENST00000591315 CASP4P49662 377 aa12.48□□□□□ -0.41
VMP1-211ENST00000591315 CDR1P51861 262 aa12.48□□□□□ -0.41
VMP1-211ENST00000591315 PSMD2Q13200 908 aa12.48□□□□□ -0.41
VMP1-211ENST00000591315 AAK1Q2M2I8 961 aa12.48□□□□□ -0.41
VMP1-211ENST00000591315 VARS2Q5ST30 1063 aaKnown RBP12.48□□□□□ -0.41
VMP1-211ENST00000591315 TMC5Q6UXY8 1006 aa12.48□□□□□ -0.41
VMP1-211ENST00000591315 CD302Q8IX05 232 aa12.48□□□□□ -0.41
VMP1-211ENST00000591315 SMRP1Q8NCR6 262 aa12.48□□□□□ -0.41
VMP1-211ENST00000591315 BEST2Q8NFU1 509 aa12.48□□□□□ -0.41
VMP1-211ENST00000591315 CASP10Q92851 521 aa12.48□□□□□ -0.41
VMP1-211ENST00000591315 SUSD3Q96L08 255 aa12.48□□□□□ -0.41
VMP1-211ENST00000591315 FBXL18Q96ME1 805 aa12.48□□□□□ -0.41
VMP1-211ENST00000591315 IPO9Q96P70 1041 aaKnown RBP12.48□□□□□ -0.41
VMP1-211ENST00000591315 C2CD2Q9Y426 696 aa12.48□□□□□ -0.41
VMP1-211ENST00000591315 USP15Q9Y4E8 981 aaPredicted RBP12.48□□□□□ -0.41
VMP1-211ENST00000591315 C2orf16Q68DN1 1984 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 ZNF233A6NK53 670 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 TGM5O43548 720 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 RFPL2O75678 378 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 ADH1AP07327 375 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 OR1D2P34982 312 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 AARSP49588 968 aaKnown RBP eCLIP12.47□□□□□ -0.41
VMP1-211ENST00000591315 LILRA4P59901 499 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 CYP24A1Q07973 514 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 ELAVL2Q12926 359 aaKnown RBP12.47□□□□□ -0.41
VMP1-211ENST00000591315 SMAD4Q13485 552 aaKnown RBP12.47□□□□□ -0.41
VMP1-211ENST00000591315 KCNB1Q14721 858 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 SNRNP35Q16560 246 aaKnown RBP12.47□□□□□ -0.41
VMP1-211ENST00000591315 LILRA6Q6PI73 481 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 HS2ST1Q7LGA3 356 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 C1orf127Q8N9H9 656 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 XXYLT1Q8NBI6 393 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 CXorf38Q8TB03 319 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 CCDC127Q96BQ5 260 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 BORCS6Q96GS4 357 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 TIGD1Q96MW7 591 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 MTMR12Q9C0I1 747 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 MAN1C1Q9NR34 630 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 DMAC2Q9NW81 257 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 FNIP2Q9P278 1114 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 MTRRQ9UBK8 725 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 STK39Q9UEW8 545 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 SIX4Q9UIU6 781 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 DERAQ9Y315 318 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 CDY1Q9Y6F8 540 aa12.47□□□□□ -0.41
VMP1-211ENST00000591315 MYO10Q9HD67 2058 aa12.46□□□□□ -0.41
VMP1-211ENST00000591315 M0QZQ0 153 aa12.46□□□□□ -0.41
VMP1-211ENST00000591315 DLL1O00548 723 aa12.46□□□□□ -0.41
VMP1-211ENST00000591315 XPOTO43592 962 aaKnown RBP12.46□□□□□ -0.41
VMP1-211ENST00000591315 TRAPPC3O43617 180 aa12.46□□□□□ -0.41
VMP1-211ENST00000591315 TBC1D4O60343 1298 aa12.46□□□□□ -0.41
VMP1-211ENST00000591315 LDHAP00338 332 aaKnown RBP12.46□□□□□ -0.41
VMP1-211ENST00000591315 GLUD1P00367 558 aa12.46□□□□□ -0.41
VMP1-211ENST00000591315 NR3C1P04150 777 aa12.46□□□□□ -0.41
VMP1-211ENST00000591315 ITGB3P05106 788 aa12.46□□□□□ -0.41
VMP1-211ENST00000591315 SP100P23497 879 aaPredicted RBP12.46□□□□□ -0.41
VMP1-211ENST00000591315 POLR2BP30876 1174 aaKnown RBP12.46□□□□□ -0.41
VMP1-211ENST00000591315 ARPP19P56211 112 aa12.46□□□□□ -0.41
VMP1-211ENST00000591315 POU5F1Q01860 360 aaKnown RBP12.46□□□□□ -0.41
VMP1-211ENST00000591315 MRPL58Q14197 206 aaKnown RBP12.46□□□□□ -0.41
VMP1-211ENST00000591315 SMAD2Q15796 467 aaKnown RBP12.46□□□□□ -0.41
VMP1-211ENST00000591315 DSTYKQ6XUX3 929 aa12.46□□□□□ -0.41
VMP1-211ENST00000591315 C12orf56Q8IXR9 622 aa12.46□□□□□ -0.41
VMP1-211ENST00000591315 SPATA20Q8TB22 786 aa12.46□□□□□ -0.41
VMP1-211ENST00000591315 SUSD6Q92537 303 aa12.46□□□□□ -0.41
VMP1-211ENST00000591315 ZNF516Q92618 1163 aa12.46□□□□□ -0.41
VMP1-211ENST00000591315 ELMO3Q96BJ8 720 aa12.46□□□□□ -0.41
VMP1-211ENST00000591315 EEF2KMTQ96G04 330 aa12.46□□□□□ -0.41
VMP1-211ENST00000591315 SENP8Q96LD8 212 aa12.46□□□□□ -0.41
VMP1-211ENST00000591315 UHRF1Q96T88 793 aaPredicted RBP12.46□□□□□ -0.41
VMP1-211ENST00000591315 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.46□□□□□ -0.41
VMP1-211ENST00000591315 INTS13Q9NVM9 706 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms