RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 DERAQ9Y315 318 aa9.98□□□□□ -0.81
DNMT1-223ENST00000591239 NUB1Q9Y5A7 615 aa9.98□□□□□ -0.81
DNMT1-223ENST00000591239 PDCD11Q14690 1871 aaKnown RBP9.98□□□□□ -0.81
DNMT1-223ENST00000591239 GOLGA8IPA6NC78 632 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 GOLGA6L4A6NEF3 574 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 C19orf67A6NJJ6 358 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 GOLGA8JA6NMD2 632 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 SYN3O14994 580 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 ADAM12O43184 909 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 EXTL3O43909 919 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 ZNF202O95125 648 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 IL18RAPO95256 599 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 SPATA31D3P0C874 917 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 SSTR3P32745 418 aaPredicted RBP9.97□□□□□ -0.81
DNMT1-223ENST00000591239 GUCY2FP51841 1108 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 GSE1Q14687 1217 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 KMT5BQ4FZB7 885 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 LILRA6Q6PI73 481 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 ELMSAN1Q6PJG2 1045 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 TMC5Q6UXY8 1006 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 SPATA31D4Q6ZUB0 917 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 ANKS3Q6ZW76 656 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 NELFCDQ8IXH7 590 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 NOC3LQ8WTT2 800 aaKnown RBP9.97□□□□□ -0.81
DNMT1-223ENST00000591239 HDAC7Q8WUI4 952 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 SCFD1Q8WVM8 642 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 POP1Q99575 1024 aaKnown RBP9.97□□□□□ -0.81
DNMT1-223ENST00000591239 PHF7Q9BWX1 381 aaPredicted RBP9.97□□□□□ -0.81
DNMT1-223ENST00000591239 PLEKHA4Q9H4M7 779 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 SFXN1Q9H9B4 322 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 EXOC1Q9NV70 894 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 MTRRQ9UBK8 725 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 CDH22Q9UJ99 828 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 C2CD2Q9Y426 696 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 UBE4BO95155 1302 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 VWA8A3KMH1 1905 aa9.97□□□□□ -0.81
DNMT1-223ENST00000591239 ANO9A1A5B4 782 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 TULP1O00294 542 aaPredicted RBP9.96□□□□□ -0.82
DNMT1-223ENST00000591239 PPEF2O14830 753 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 KIAA0391O15091 583 aaKnown RBP9.96□□□□□ -0.82
DNMT1-223ENST00000591239 TGFB1I1O43294 461 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 RPN1P04843 607 aaKnown RBP9.96□□□□□ -0.82
DNMT1-223ENST00000591239 WEE2P0C1S8 567 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 MCM4P33991 863 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 OR1D2P34982 312 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 MTHFRP42898 656 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 STK4Q13043 487 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 PSMD2Q13200 908 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 KNOP1Q1ED39 458 aaKnown RBP9.96□□□□□ -0.82
DNMT1-223ENST00000591239 BMT2Q1RMZ1 405 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 ATAT1Q5SQI0 421 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 VARS2Q5ST30 1063 aaKnown RBP9.96□□□□□ -0.82
DNMT1-223ENST00000591239 C9orf57Q5W0N0 161 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 KRBA2Q6ZNG9 492 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 NT5DC4Q86YG4 428 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 BRSK2Q8IWQ3 736 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 EFCAB13Q8IY85 973 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 GPD1LQ8N335 351 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 KREMEN2Q8NCW0 462 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 FEZF2Q8TBJ5 459 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 RIPOR3Q96MK2 946 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 NECTIN4Q96NY8 510 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 POMKQ9H5K3 350 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 AGPAT3Q9NRZ7 376 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 RBAKQ9NYW8 714 aaPredicted RBP9.96□□□□□ -0.82
DNMT1-223ENST00000591239 HSPBP1Q9NZL4 362 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 BACE2Q9Y5Z0 518 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 CDY1Q9Y6F8 540 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 PLXNA3P51805 1871 aa9.96□□□□□ -0.82
DNMT1-223ENST00000591239 CCDC195A0A1B0GUA6 201 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 ZNF233A6NK53 670 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 LOC730098B7Z3J9 87 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 H7C4K7 107 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 M0QZQ0 153 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 PIRO00625 290 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 TBC1D4O60343 1298 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 RFPL2O75678 378 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 PRR29P0C7W0 189 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 ANP32AP39687 249 aaKnown RBP9.95□□□□□ -0.82
DNMT1-223ENST00000591239 AARSP49588 968 aaKnown RBP eCLIP9.95□□□□□ -0.82
DNMT1-223ENST00000591239 WNT7BP56706 349 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 LILRA4P59901 499 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 SNRPFP62306 86 aaKnown RBP9.95□□□□□ -0.82
DNMT1-223ENST00000591239 TFAMQ00059 246 aaKnown RBP9.95□□□□□ -0.82
DNMT1-223ENST00000591239 DPYDQ12882 1025 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 RAB33AQ14088 237 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 MRPL58Q14197 206 aaKnown RBP9.95□□□□□ -0.82
DNMT1-223ENST00000591239 RSPO2Q6UXX9 243 aaPredicted RBP9.95□□□□□ -0.82
DNMT1-223ENST00000591239 C15orf39Q6ZRI6 1047 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 HS2ST1Q7LGA3 356 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 GPR149Q86SP6 731 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 FMR1NBQ8N0W7 255 aaPredicted RBP9.95□□□□□ -0.82
DNMT1-223ENST00000591239 KIAA0895Q8NCT3 520 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 APPL2Q8NEU8 664 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 CMASQ8NFW8 434 aaPredicted RBP9.95□□□□□ -0.82
DNMT1-223ENST00000591239 RPGRIP1Q96KN7 1286 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 KIAA1586Q9HCI6 787 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 PDE11AQ9HCR9 933 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 DPP3Q9NY33 737 aa9.95□□□□□ -0.82
DNMT1-223ENST00000591239 CGNQ9P2M7 1197 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 276 ms