RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 CCDC183Q5T5S1 534 aa22.78■■□□□ 1.24
CIRBP-229ENST00000590704 C15orf39Q6ZRI6 1047 aa22.78■■□□□ 1.24
CIRBP-229ENST00000590704 WDR49Q8IV35 697 aa22.78■■□□□ 1.24
CIRBP-229ENST00000590704 MLKLQ8NB16 471 aa22.78■■□□□ 1.24
CIRBP-229ENST00000590704 CGRRF1Q99675 332 aa22.78■■□□□ 1.24
CIRBP-229ENST00000590704 PUF60Q9UHX1 559 aaKnown RBP22.78■■□□□ 1.24
CIRBP-229ENST00000590704 CTNND2Q9UQB3 1225 aa22.78■■□□□ 1.24
CIRBP-229ENST00000590704 FKBP3Q00688 224 aaKnown RBP22.77■■□□□ 1.24
CIRBP-229ENST00000590704 DSG1Q02413 1049 aa22.77■■□□□ 1.24
CIRBP-229ENST00000590704 HYAL1Q12794 435 aa22.77■■□□□ 1.24
CIRBP-229ENST00000590704 SURF1Q15526 300 aa22.77■■□□□ 1.24
CIRBP-229ENST00000590704 KLHL40Q2TBA0 621 aa22.77■■□□□ 1.24
CIRBP-229ENST00000590704 TMC2Q8TDI7 906 aa22.77■■□□□ 1.24
CIRBP-229ENST00000590704 SUSD3Q96L08 255 aa22.77■■□□□ 1.24
CIRBP-229ENST00000590704 MKNK1Q9BUB5 465 aa22.77■■□□□ 1.24
CIRBP-229ENST00000590704 M0QZQ0 153 aa22.76■■□□□ 1.23
CIRBP-229ENST00000590704 CXCL14O95715 111 aa22.76■■□□□ 1.23
CIRBP-229ENST00000590704 DLATP10515 647 aaKnown RBP22.76■■□□□ 1.23
CIRBP-229ENST00000590704 RPL13P26373 211 aaKnown RBP22.76■■□□□ 1.23
CIRBP-229ENST00000590704 PSMC2P35998 433 aaKnown RBP22.76■■□□□ 1.23
CIRBP-229ENST00000590704 PAK1Q13153 545 aa22.76■■□□□ 1.23
CIRBP-229ENST00000590704 MRPL58Q14197 206 aaKnown RBP22.76■■□□□ 1.23
CIRBP-229ENST00000590704 PTPROQ16827 1216 aa22.76■■□□□ 1.23
CIRBP-229ENST00000590704 PLPP4Q5VZY2 271 aa22.76■■□□□ 1.23
CIRBP-229ENST00000590704 TRAPPC11Q7Z392 1133 aa22.76■■□□□ 1.23
CIRBP-229ENST00000590704 TMC7Q7Z402 723 aa22.76■■□□□ 1.23
CIRBP-229ENST00000590704 IRF2BP1Q8IU81 584 aa22.76■■□□□ 1.23
CIRBP-229ENST00000590704 LNX1Q8TBB1 728 aaPredicted RBP22.76■■□□□ 1.23
CIRBP-229ENST00000590704 XPOTO43592 962 aaKnown RBP22.75■■□□□ 1.23
CIRBP-229ENST00000590704 TBC1D4O60343 1298 aa22.75■■□□□ 1.23
CIRBP-229ENST00000590704 VNN1O95497 513 aa22.75■■□□□ 1.23
CIRBP-229ENST00000590704 ITGB3P05106 788 aa22.75■■□□□ 1.23
CIRBP-229ENST00000590704 TKTP29401 623 aaKnown RBP22.75■■□□□ 1.23
CIRBP-229ENST00000590704 PPP3CAQ08209 521 aa22.75■■□□□ 1.23
CIRBP-229ENST00000590704 DUOXA2Q1HG44 320 aa22.75■■□□□ 1.23
CIRBP-229ENST00000590704 FAM171A1Q5VUB5 890 aa22.75■■□□□ 1.23
CIRBP-229ENST00000590704 PDE12Q6L8Q7 609 aaKnown RBP22.75■■□□□ 1.23
CIRBP-229ENST00000590704 CAVIN1Q6NZI2 390 aaKnown RBP22.75■■□□□ 1.23
CIRBP-229ENST00000590704 RSPO2Q6UXX9 243 aaPredicted RBP22.75■■□□□ 1.23
CIRBP-229ENST00000590704 FAM186BQ8IYM0 893 aa22.75■■□□□ 1.23
CIRBP-229ENST00000590704 VN1R2Q8NFZ6 395 aa22.75■■□□□ 1.23
CIRBP-229ENST00000590704 NSUN3Q9H649 340 aaKnown RBP22.75■■□□□ 1.23
CIRBP-229ENST00000590704 RXFP1Q9HBX9 757 aa22.75■■□□□ 1.23
CIRBP-229ENST00000590704 NGRNQ9NPE2 291 aaKnown RBP22.75■■□□□ 1.23
CIRBP-229ENST00000590704 RWDD2AQ9UIY3 292 aa22.75■■□□□ 1.23
CIRBP-229ENST00000590704 CETN3O15182 167 aa22.74■■□□□ 1.23
CIRBP-229ENST00000590704 POLR2BP30876 1174 aaKnown RBP22.74■■□□□ 1.23
CIRBP-229ENST00000590704 RBM10P98175 930 aaKnown RBP22.74■■□□□ 1.23
CIRBP-229ENST00000590704 STIM1Q13586 685 aa22.74■■□□□ 1.23
CIRBP-229ENST00000590704 CCDC85BQ15834 202 aaPredicted RBP22.74■■□□□ 1.23
CIRBP-229ENST00000590704 CTC1Q2NKJ3 1217 aa22.74■■□□□ 1.23
CIRBP-229ENST00000590704 USP41Q3LFD5 358 aa22.74■■□□□ 1.23
CIRBP-229ENST00000590704 TDRD10Q5VZ19 366 aaKnown RBP22.74■■□□□ 1.23
CIRBP-229ENST00000590704 FILIP1Q7Z7B0 1213 aa22.74■■□□□ 1.23
CIRBP-229ENST00000590704 GPR65Q8IYL9 337 aa22.74■■□□□ 1.23
CIRBP-229ENST00000590704 FUCA2Q9BTY2 467 aa22.74■■□□□ 1.23
CIRBP-229ENST00000590704 FRMD4BQ9Y2L6 1034 aa22.74■■□□□ 1.23
CIRBP-229ENST00000590704 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.74■■□□□ 1.23
CIRBP-229ENST00000590704 SF3B1O75533 1304 aaKnown RBP eCLIP22.74■■□□□ 1.231e-6■■■■■ 35.3
CIRBP-229ENST00000590704 PER2O15055 1255 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 ADAM12O43184 909 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 LRRN2O75325 713 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 CNPP09543 421 aaKnown RBP22.73■■□□□ 1.23
CIRBP-229ENST00000590704 VAMP7P51809 220 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 ENPEPQ07075 957 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 BFSP1Q12934 665 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 PRSS55Q6UWB4 352 aaPredicted RBP22.73■■□□□ 1.23
CIRBP-229ENST00000590704 LIMS2Q7Z4I7 341 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 CSGALNACT2Q8N6G5 542 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 CACTINQ8WUQ7 758 aaKnown RBP22.73■■□□□ 1.23
CIRBP-229ENST00000590704 PIK3R5Q8WYR1 880 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 XYLT2Q9H1B5 865 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 ITGA11Q9UKX5 1188 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 AGAP1Q9UPQ3 857 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 LINC01565O15544 149 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 GLP2RO95838 553 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 TRIM49P0CI25 452 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 TRIM49CP0CI26 452 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 TNNI1P19237 187 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 LTBRP36941 435 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 SMC1AQ14683 1233 aaKnown RBP22.73■■□□□ 1.23
CIRBP-229ENST00000590704 NFKBIBQ15653 356 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 DUSP6Q16828 381 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 ZACNQ401N2 412 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 SV2AQ7L0J3 742 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 MICAL1Q8TDZ2 1067 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 SENP8Q96LD8 212 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 CEP63Q96MT8 703 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 KLHL5Q96PQ7 755 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 FNBP1Q96RU3 617 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 TSG101Q99816 390 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 CLSTN3Q9BQT9 956 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 ENTPD7Q9NQZ7 604 aa22.73■■□□□ 1.23
CIRBP-229ENST00000590704 IKBKBO14920 756 aa22.72■■□□□ 1.23
CIRBP-229ENST00000590704 CLASP2O75122 1294 aaKnown RBP22.72■■□□□ 1.23
CIRBP-229ENST00000590704 GLUD2P49448 558 aa22.72■■□□□ 1.23
CIRBP-229ENST00000590704 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.72■■□□□ 1.23
CIRBP-229ENST00000590704 C11orf57Q6ZUT1 292 aaPredicted RBP22.72■■□□□ 1.23
CIRBP-229ENST00000590704 INTS8Q75QN2 995 aaKnown RBP22.72■■□□□ 1.23
CIRBP-229ENST00000590704 RBM23Q86U06 439 aaKnown RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms