RNA–Protein interactions for RNA: ENST00000590049.5

CAPNS1-209, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5

Gene CAPNS1, Length 592 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-209ENST00000590049 RXFP1Q9HBX9 757 aa12.74□□□□□ -0.37
CAPNS1-209ENST00000590049 SAMM50Q9Y512 469 aa12.74□□□□□ -0.37
CAPNS1-209ENST00000590049 SPATA31C2B4DYI2 1134 aa12.73□□□□□ -0.37
CAPNS1-209ENST00000590049 TGM5O43548 720 aa12.73□□□□□ -0.37
CAPNS1-209ENST00000590049 CHMP2AO43633 222 aa12.73□□□□□ -0.37
CAPNS1-209ENST00000590049 EXTL3O43909 919 aa12.73□□□□□ -0.37
CAPNS1-209ENST00000590049 C6P13671 934 aa12.73□□□□□ -0.37
CAPNS1-209ENST00000590049 SYKP43405 635 aa12.73□□□□□ -0.37
CAPNS1-209ENST00000590049 SLC11A1P49279 550 aa12.73□□□□□ -0.37
CAPNS1-209ENST00000590049 ZRSR1Q15695 479 aaKnown RBP12.73□□□□□ -0.37
CAPNS1-209ENST00000590049 AXDND1Q5T1B0 1012 aaPredicted RBP12.73□□□□□ -0.37
CAPNS1-209ENST00000590049 RESP18Q5W5W9 173 aa12.73□□□□□ -0.37
CAPNS1-209ENST00000590049 C1orf228Q6PIY5 440 aa12.73□□□□□ -0.37
CAPNS1-209ENST00000590049 PALB2Q86YC2 1186 aa12.73□□□□□ -0.37
CAPNS1-209ENST00000590049 HDDC3Q8N4P3 179 aa12.73□□□□□ -0.37
CAPNS1-209ENST00000590049 ELSPBP1Q96BH3 223 aa12.73□□□□□ -0.37
CAPNS1-209ENST00000590049 WBP1Q96G27 269 aa12.73□□□□□ -0.37
CAPNS1-209ENST00000590049 TRMT61BQ9BVS5 477 aaKnown RBP12.73□□□□□ -0.37
CAPNS1-209ENST00000590049 SMARCAD1Q9H4L7 1026 aa12.73□□□□□ -0.37
CAPNS1-209ENST00000590049 EVLQ9UI08 416 aaPredicted RBP12.73□□□□□ -0.37
CAPNS1-209ENST00000590049 DNMT3LQ9UJW3 386 aa12.73□□□□□ -0.37
CAPNS1-209ENST00000590049 FBN3Q75N90 2809 aa12.73□□□□□ -0.37
CAPNS1-209ENST00000590049 LRRK2Q5S007 2527 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 NBPF19A0A087WUL8 3843 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 COL5A1P20908 1838 aaPredicted RBP12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 TSC2P49815 1807 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 NFASCO94856 1347 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 A0A1B0GVL5 298 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 PSMD10O75832 226 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 SOD2P04179 222 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 FTH1P19P0C7X4 201 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 PFKFB1P16118 471 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 SFNP31947 248 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 JAK3P52333 1124 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 GRIN1Q05586 938 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 FAM160A1Q05DH4 1040 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 PPP2R5CQ13362 524 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 GRM2Q14416 872 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 KARSQ15046 597 aaKnown RBP12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 PLCB4Q15147 1175 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 TANGO2Q6ICL3 276 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 SHC4Q6S5L8 630 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 LRRC69Q6ZNQ3 347 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 MIER3Q7Z3K6 550 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 ZNF598Q86UK7 904 aaKnown RBP12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 PIAS4Q8N2W9 510 aaPredicted RBP12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 PNPLA1Q8N8W4 532 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 IGSF22Q8N9C0 903 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 SNX29Q8TEQ0 813 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 TRAPPC12Q8WVT3 735 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 GJA10Q969M2 543 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 MSANTD3Q96H12 275 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 SENP7Q9BQF6 1050 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 ZNF334Q9HCZ1 680 aaPredicted RBP12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 JPH1Q9HDC5 661 aaPredicted RBP12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 HOOK1Q9UJC3 728 aaKnown RBP12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 KCNH3Q9ULD8 1083 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 DOCK6Q96HP0 2047 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 WDR81Q562E7 1941 aa12.72□□□□□ -0.37
CAPNS1-209ENST00000590049 A0A0U1RQF3 1178 aa12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 WDR64B1ANS9 1081 aa12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 SLC26A4O43511 780 aa12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 TRAK2O60296 914 aa12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 HNRNPA1P09651 372 aaKnown RBP eCLIP12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 CCT6AP40227 531 aaKnown RBP12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 CRYBB1P53674 252 aaPredicted RBP12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 MLLT6P55198 1093 aaPredicted RBP12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 RNASELQ05823 741 aaKnown RBP12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 SEMA3FQ13275 785 aa12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 TRIP6Q15654 476 aaKnown RBP12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 IL17AQ16552 155 aa12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 KLHL40Q2TBA0 621 aa12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 RRAGBQ5VZM2 374 aa12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 ZNF746Q6NUN9 644 aaPredicted RBP12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 AGMOQ6ZNB7 445 aa12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 CYP2U1Q7Z449 544 aa12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 MAP4K3Q8IVH8 894 aa12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 CEP57L1Q8IYX8 460 aa12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 SYNPOQ8N3V7 929 aa12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 WHAMMQ8TF30 809 aa12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 NUSAP1Q9BXS6 441 aaKnown RBP12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 CCSER1Q9C0I3 900 aa12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 GBP3Q9H0R5 595 aa12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 DDX19AQ9NUU7 478 aaKnown RBP12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 TBC1D13Q9NVG8 400 aa12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 GDE1Q9NZC3 331 aa12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 SLC9A2Q9UBY0 812 aa12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 DNAJB4Q9UDY4 337 aa12.71□□□□□ -0.37
CAPNS1-209ENST00000590049 MGAQ8IWI9 3026 aa12.71□□□□□ -0.38
CAPNS1-209ENST00000590049 TRABD2BA6NFA1 517 aa12.7□□□□□ -0.38
CAPNS1-209ENST00000590049 DCLK1O15075 740 aa12.7□□□□□ -0.38
CAPNS1-209ENST00000590049 DKC1O60832 514 aaKnown RBP eCLIP12.7□□□□□ -0.38
CAPNS1-209ENST00000590049 ATP9AO75110 1047 aa12.7□□□□□ -0.38
CAPNS1-209ENST00000590049 KCNA2P16389 499 aa12.7□□□□□ -0.38
CAPNS1-209ENST00000590049 STAT6P42226 847 aa12.7□□□□□ -0.38
CAPNS1-209ENST00000590049 IL12RB1P42701 662 aa12.7□□□□□ -0.38
CAPNS1-209ENST00000590049 GLUD2P49448 558 aa12.7□□□□□ -0.38
CAPNS1-209ENST00000590049 NDUFA8P51970 172 aa12.7□□□□□ -0.38
CAPNS1-209ENST00000590049 ITGB3BPQ13352 177 aaPredicted RBP12.7□□□□□ -0.38
CAPNS1-209ENST00000590049 TRIM61Q5EBN2 209 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms