RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 SEZ6Q53EL9 994 aa16.29■□□□□ 0.2
MBD1-217ENST00000588937 LRIG3Q6UXM1 1119 aa16.29■□□□□ 0.2
MBD1-217ENST00000588937 MON1BQ7L1V2 547 aa16.29■□□□□ 0.2
MBD1-217ENST00000588937 PHF13Q86YI8 300 aaPredicted RBP16.29■□□□□ 0.2
MBD1-217ENST00000588937 SLC13A5Q86YT5 568 aaPredicted RBP16.29■□□□□ 0.2
MBD1-217ENST00000588937 C1orf131Q8NDD1 294 aaKnown RBP16.29■□□□□ 0.2
MBD1-217ENST00000588937 MAIP1Q8WWC4 291 aa16.29■□□□□ 0.2
MBD1-217ENST00000588937 CYFIP2Q96F07 1278 aa16.29■□□□□ 0.2
MBD1-217ENST00000588937 ANKRD36BP1Q96IX9 119 aa16.29■□□□□ 0.2
MBD1-217ENST00000588937 NLRP4Q96MN2 994 aa16.29■□□□□ 0.2
MBD1-217ENST00000588937 ERP44Q9BS26 406 aa16.29■□□□□ 0.2
MBD1-217ENST00000588937 CELF4Q9BZC1 486 aaKnown RBP16.29■□□□□ 0.2
MBD1-217ENST00000588937 PRMT7Q9NVM4 692 aaPredicted RBP16.29■□□□□ 0.2
MBD1-217ENST00000588937 PCYOX1Q9UHG3 505 aa16.29■□□□□ 0.2
MBD1-217ENST00000588937 MCM3APO60318 1980 aa16.29■□□□□ 0.2
MBD1-217ENST00000588937 PLXNA1Q9UIW2 1896 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 ERICH4A6NGS2 130 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 TTLL13PA6NNM8 815 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 INO80B-WBP1J3KQ70 363 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 ABLIM1O14639 778 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 THAP12O43422 761 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 STRNO43815 780 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 TNNC2P02585 160 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 TMEM191BP0C7N4 346 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 CYP2C8P10632 490 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 PYGMP11217 842 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 RRM1P23921 792 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 GCLCP48506 637 aaPredicted RBP16.28■□□□□ 0.2
MBD1-217ENST00000588937 MARCKSL1P49006 195 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 GTF2A2P52657 109 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 ZNF132P52740 706 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 YWHAEP62258 255 aaKnown RBP16.28■□□□□ 0.2
MBD1-217ENST00000588937 NOMO3P69849 1222 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 C1QBPQ07021 282 aaKnown RBP16.28■□□□□ 0.2
MBD1-217ENST00000588937 CYP1B1Q16678 543 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 ZNF568Q3ZCX4 644 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 CST9Q5W186 159 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 ADAT2Q7Z6V5 191 aaKnown RBP16.28■□□□□ 0.2
MBD1-217ENST00000588937 ZNF467Q7Z7K2 595 aaPredicted RBP16.28■□□□□ 0.2
MBD1-217ENST00000588937 MAGOHBQ96A72 148 aaKnown RBP16.28■□□□□ 0.2
MBD1-217ENST00000588937 FAM212AQ96EL1 285 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 INO80BQ9C086 356 aaPredicted RBP16.28■□□□□ 0.2
MBD1-217ENST00000588937 NIF3L1Q9GZT8 377 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 ZNF408Q9H9D4 720 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 PTPRHQ9HD43 1115 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 PDGFCQ9NRA1 345 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 ADAM22Q9P0K1 906 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 LCMT1Q9UIC8 334 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 TNFSF13BQ9Y275 285 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 NR2E1Q9Y466 385 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 PLXNB2O15031 1838 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 MROH7Q68CQ1 1323 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 A6NNZ2 444 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 B4GALT4O60513 344 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 IL18RAPO95256 599 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 YY1P25490 414 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 PHKA2P46019 1235 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 ARHGAP1Q07960 439 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 TUBB8Q3ZCM7 444 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 SPDYCQ5MJ68 293 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 DUPD1Q68J44 220 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 DDX42Q86XP3 938 aaKnown RBP eCLIP16.28■□□□□ 0.2
MBD1-217ENST00000588937 UBR7Q8N806 425 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 PRELID2Q8N945 189 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 EMID1Q96A84 441 aaPredicted RBP16.28■□□□□ 0.2
MBD1-217ENST00000588937 MTMR12Q9C0I1 747 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 ERVK-5Q9HDB9 667 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 PARP2Q9UGN5 583 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 PRDM4Q9UKN5 801 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 IVNS1ABPQ9Y6Y0 642 aa16.28■□□□□ 0.2
MBD1-217ENST00000588937 COL1A2P08123 1366 aa16.27■□□□□ 0.2
MBD1-217ENST00000588937 RBM47A0AV96 593 aaKnown RBP16.27■□□□□ 0.2
MBD1-217ENST00000588937 GOLGA6L10A6NI86 522 aa16.27■□□□□ 0.2
MBD1-217ENST00000588937 PDHXO00330 501 aa16.27■□□□□ 0.2
MBD1-217ENST00000588937 C22orf31O95567 290 aa16.27■□□□□ 0.2
MBD1-217ENST00000588937 CST3P01034 146 aaPredicted RBP16.27■□□□□ 0.2
MBD1-217ENST00000588937 CALCAP01258 141 aa16.27■□□□□ 0.2
MBD1-217ENST00000588937 ACTN2P35609 894 aa16.27■□□□□ 0.2
MBD1-217ENST00000588937 FNTAP49354 379 aa16.27■□□□□ 0.2
MBD1-217ENST00000588937 TNFAIP2Q03169 654 aa16.27■□□□□ 0.2
MBD1-217ENST00000588937 MBTD1Q05BQ5 628 aa16.27■□□□□ 0.2
MBD1-217ENST00000588937 FAM187BQ17R55 369 aa16.27■□□□□ 0.2
MBD1-217ENST00000588937 JAMLQ86YT9 394 aa16.27■□□□□ 0.2
MBD1-217ENST00000588937 PPTC7Q8NI37 304 aa16.27■□□□□ 0.2
MBD1-217ENST00000588937 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.27■□□□□ 0.2
MBD1-217ENST00000588937 TRAPPC12Q8WVT3 735 aa16.27■□□□□ 0.2
MBD1-217ENST00000588937 RPF1Q9H9Y2 349 aaKnown RBP16.27■□□□□ 0.2
MBD1-217ENST00000588937 ZSWIM8A7E2V4 1837 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 LSM8O95777 96 aaKnown RBP16.26■□□□□ 0.19
MBD1-217ENST00000588937 LGALS2P05162 132 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 TMOD1P28289 359 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 ADORA2AP29274 412 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 CLCN3P51790 818 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 MYL6P60660 151 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 TFAMQ00059 246 aaKnown RBP16.26■□□□□ 0.19
MBD1-217ENST00000588937 PTP4A2Q12974 167 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 KYAT1Q16773 422 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 SPRYD7Q5W111 196 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 TAPT1Q6NXT6 567 aa16.26■□□□□ 0.19
MBD1-217ENST00000588937 AADACL2Q6P093 401 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms