RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 APOBEC3GQ9HC16 384 aaKnown RBP23.92■■□□□ 1.42
ATG4D-209ENST00000588857 SIX4Q9UIU6 781 aa23.92■■□□□ 1.42
ATG4D-209ENST00000588857 UBQLN1Q9UMX0 589 aaKnown RBP23.92■■□□□ 1.42
ATG4D-209ENST00000588857 NUB1Q9Y5A7 615 aa23.92■■□□□ 1.42
ATG4D-209ENST00000588857 NBNO60934 754 aa23.91■■□□□ 1.42
ATG4D-209ENST00000588857 PLEKP08567 350 aaPredicted RBP23.91■■□□□ 1.42
ATG4D-209ENST00000588857 SYN1P17600 705 aa23.91■■□□□ 1.42
ATG4D-209ENST00000588857 ATICP31939 592 aa23.91■■□□□ 1.42
ATG4D-209ENST00000588857 EIF4A3P38919 411 aaKnown RBP23.91■■□□□ 1.42
ATG4D-209ENST00000588857 USP8P40818 1118 aa23.91■■□□□ 1.42
ATG4D-209ENST00000588857 CUL2Q13617 745 aa23.91■■□□□ 1.42
ATG4D-209ENST00000588857 SCARA3Q6AZY7 606 aa23.91■■□□□ 1.42
ATG4D-209ENST00000588857 CHRDL2Q6WN34 429 aa23.91■■□□□ 1.42
ATG4D-209ENST00000588857 TOGARAM2Q6ZUX3 1019 aa23.91■■□□□ 1.42
ATG4D-209ENST00000588857 RNF169Q8NCN4 708 aa23.91■■□□□ 1.42
ATG4D-209ENST00000588857 SHC3Q92529 594 aa23.91■■□□□ 1.42
ATG4D-209ENST00000588857 JAKMIP2Q96AA8 810 aa23.91■■□□□ 1.42
ATG4D-209ENST00000588857 RGS18Q9NS28 235 aa23.91■■□□□ 1.42
ATG4D-209ENST00000588857 AGAP1Q9UPQ3 857 aa23.91■■□□□ 1.42
ATG4D-209ENST00000588857 GIT1Q9Y2X7 761 aa23.91■■□□□ 1.42
ATG4D-209ENST00000588857 EPN1Q9Y6I3 576 aaPredicted RBP23.91■■□□□ 1.42
ATG4D-209ENST00000588857 SCN5AQ14524 2016 aa23.91■■□□□ 1.42
ATG4D-209ENST00000588857 SSU72P8A0A1W2PR75 194 aa23.91■■□□□ 1.42
ATG4D-209ENST00000588857 OFD1O75665 1012 aa23.91■■□□□ 1.42
ATG4D-209ENST00000588857 PARNO95453 639 aaKnown RBP23.91■■□□□ 1.42
ATG4D-209ENST00000588857 POLR2BP30876 1174 aaKnown RBP23.91■■□□□ 1.42
ATG4D-209ENST00000588857 GUCY2FP51841 1108 aa23.91■■□□□ 1.42
ATG4D-209ENST00000588857 FAM43BQ6ZT52 329 aaPredicted RBP23.91■■□□□ 1.42
ATG4D-209ENST00000588857 C17orf53Q8N3J3 647 aaPredicted RBP23.91■■□□□ 1.42
ATG4D-209ENST00000588857 SEPT8Q92599 483 aa23.91■■□□□ 1.42
ATG4D-209ENST00000588857 LPPQ93052 612 aa23.91■■□□□ 1.42
ATG4D-209ENST00000588857 XYLT2Q9H1B5 865 aa23.91■■□□□ 1.42
ATG4D-209ENST00000588857 UMODL1Q5DID0 1318 aa23.9■■□□□ 1.42
ATG4D-209ENST00000588857 CCP110O43303 1012 aa23.9■■□□□ 1.42
ATG4D-209ENST00000588857 AKR1B10O60218 316 aa23.9■■□□□ 1.42
ATG4D-209ENST00000588857 NDUFA10O95299 355 aa23.9■■□□□ 1.42
ATG4D-209ENST00000588857 IPO7O95373 1038 aaKnown RBP23.9■■□□□ 1.42
ATG4D-209ENST00000588857 IBSPP21815 317 aaPredicted RBP23.9■■□□□ 1.42
ATG4D-209ENST00000588857 PRKCIP41743 596 aa23.9■■□□□ 1.42
ATG4D-209ENST00000588857 MAPK8IP2Q13387 824 aaPredicted RBP23.9■■□□□ 1.42
ATG4D-209ENST00000588857 CXorf38Q8TB03 319 aa23.9■■□□□ 1.42
ATG4D-209ENST00000588857 C18orf25Q96B23 403 aaPredicted RBP23.9■■□□□ 1.42
ATG4D-209ENST00000588857 RPS6KC1Q96S38 1066 aa23.9■■□□□ 1.42
ATG4D-209ENST00000588857 PPP1R12CQ9BZL4 782 aa23.9■■□□□ 1.42
ATG4D-209ENST00000588857 NIF3L1Q9GZT8 377 aa23.9■■□□□ 1.42
ATG4D-209ENST00000588857 HAUS4Q9H6D7 363 aa23.9■■□□□ 1.42
ATG4D-209ENST00000588857 UBN1Q9NPG3 1134 aa23.9■■□□□ 1.42
ATG4D-209ENST00000588857 TMEM39AQ9NV64 488 aa23.9■■□□□ 1.42
ATG4D-209ENST00000588857 TUBGCP4Q9UGJ1 667 aa23.9■■□□□ 1.42
ATG4D-209ENST00000588857 ZSCAN12O43309 604 aa23.89■■□□□ 1.41
ATG4D-209ENST00000588857 CCDC175P0C221 793 aa23.89■■□□□ 1.41
ATG4D-209ENST00000588857 MLH1P40692 756 aa23.89■■□□□ 1.41
ATG4D-209ENST00000588857 PLEKHG4Q58EX7 1191 aa23.89■■□□□ 1.41
ATG4D-209ENST00000588857 ZNF667Q5HYK9 610 aa23.89■■□□□ 1.41
ATG4D-209ENST00000588857 SLC24A5Q71RS6 500 aa23.89■■□□□ 1.41
ATG4D-209ENST00000588857 ECHDC2Q86YB7 292 aa23.89■■□□□ 1.41
ATG4D-209ENST00000588857 FAM71AQ8IYT1 594 aa23.89■■□□□ 1.41
ATG4D-209ENST00000588857 CCAR2Q8N163 923 aaKnown RBP23.89■■□□□ 1.41
ATG4D-209ENST00000588857 HPDLQ96IR7 371 aa23.89■■□□□ 1.41
ATG4D-209ENST00000588857 ZFP42Q96MM3 310 aa23.89■■□□□ 1.41
ATG4D-209ENST00000588857 GAD1Q99259 594 aa23.89■■□□□ 1.41
ATG4D-209ENST00000588857 ARID3AQ99856 593 aa23.89■■□□□ 1.41
ATG4D-209ENST00000588857 DESI2Q9BSY9 194 aa23.89■■□□□ 1.41
ATG4D-209ENST00000588857 PRO3102Q9H379 93 aa23.89■■□□□ 1.41
ATG4D-209ENST00000588857 RNF19AQ9NV58 838 aa23.89■■□□□ 1.41
ATG4D-209ENST00000588857 TDRD15B5MCY1 1934 aaKnown RBP23.89■■□□□ 1.41
ATG4D-209ENST00000588857 ALPK3Q96L96 1907 aa23.88■■□□□ 1.41
ATG4D-209ENST00000588857 MEIS3P2A8K0S8 358 aa23.88■■□□□ 1.41
ATG4D-209ENST00000588857 CLTBP09497 229 aa23.88■■□□□ 1.41
ATG4D-209ENST00000588857 KRT5P13647 590 aa23.88■■□□□ 1.41
ATG4D-209ENST00000588857 CCL23P55773 120 aa23.88■■□□□ 1.41
ATG4D-209ENST00000588857 PTK2Q05397 1052 aa23.88■■□□□ 1.41
ATG4D-209ENST00000588857 MYO1EQ12965 1108 aa23.88■■□□□ 1.41
ATG4D-209ENST00000588857 AGMOQ6ZNB7 445 aa23.88■■□□□ 1.41
ATG4D-209ENST00000588857 VPS36Q86VN1 386 aa23.88■■□□□ 1.41
ATG4D-209ENST00000588857 APBB2Q92870 758 aa23.88■■□□□ 1.41
ATG4D-209ENST00000588857 FAXDC2Q96IV6 333 aa23.88■■□□□ 1.41
ATG4D-209ENST00000588857 SLC38A7Q9NVC3 462 aa23.88■■□□□ 1.41
ATG4D-209ENST00000588857 NXF1Q9UBU9 619 aaKnown RBP23.88■■□□□ 1.41
ATG4D-209ENST00000588857 TBX21Q9UL17 535 aa23.88■■□□□ 1.41
ATG4D-209ENST00000588857 PPP2R2CQ9Y2T4 447 aa23.88■■□□□ 1.41
ATG4D-209ENST00000588857 SCN1AP35498 2009 aa23.88■■□□□ 1.41
ATG4D-209ENST00000588857 ARL5CA6NH57 179 aa23.87■■□□□ 1.41
ATG4D-209ENST00000588857 EIF3CLB5ME19 914 aaKnown RBP23.87■■□□□ 1.41
ATG4D-209ENST00000588857 P4HA1P13674 534 aa23.87■■□□□ 1.41
ATG4D-209ENST00000588857 CYP3A5P20815 502 aa23.87■■□□□ 1.41
ATG4D-209ENST00000588857 KIF11P52732 1056 aa23.87■■□□□ 1.41
ATG4D-209ENST00000588857 GPNMBQ14956 572 aa23.87■■□□□ 1.41
ATG4D-209ENST00000588857 WDR72Q3MJ13 1102 aa23.87■■□□□ 1.41
ATG4D-209ENST00000588857 HABP4Q5JVS0 413 aaKnown RBP23.87■■□□□ 1.41
ATG4D-209ENST00000588857 RTN4RL1Q86UN2 441 aaPredicted RBP23.87■■□□□ 1.41
ATG4D-209ENST00000588857 TMEM130Q8N3G9 435 aa23.87■■□□□ 1.41
ATG4D-209ENST00000588857 DBF4BQ8NFT6 615 aa23.87■■□□□ 1.41
ATG4D-209ENST00000588857 TET1Q8NFU7 2136 aa23.87■■□□□ 1.41
ATG4D-209ENST00000588857 SCLYQ96I15 445 aa23.87■■□□□ 1.41
ATG4D-209ENST00000588857 EIF3CQ99613 913 aaKnown RBP23.87■■□□□ 1.41
ATG4D-209ENST00000588857 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.87■■□□□ 1.41
ATG4D-209ENST00000588857 TSPYL2Q9H2G4 693 aaPredicted RBP23.87■■□□□ 1.41
ATG4D-209ENST00000588857 RSAD1Q9HA92 442 aa23.87■■□□□ 1.41
ATG4D-209ENST00000588857 KCND1Q9NSA2 647 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms