RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 C1RP00736 705 aa20.37■□□□□ 0.85
ERCC1-207ENST00000588738 TKTP29401 623 aaKnown RBP20.37■□□□□ 0.85
ERCC1-207ENST00000588738 GUCY2FP51841 1108 aa20.37■□□□□ 0.85
ERCC1-207ENST00000588738 CACTINQ8WUQ7 758 aaKnown RBP20.37■□□□□ 0.85
ERCC1-207ENST00000588738 SUSD3Q96L08 255 aa20.37■□□□□ 0.85
ERCC1-207ENST00000588738 DPP3Q9NY33 737 aa20.37■□□□□ 0.85
ERCC1-207ENST00000588738 PLXNA3P51805 1871 aa20.37■□□□□ 0.85
ERCC1-207ENST00000588738 MTCL1Q9Y4B5 1905 aaKnown RBP20.36■□□□□ 0.85
ERCC1-207ENST00000588738 SYN3O14994 580 aa20.36■□□□□ 0.85
ERCC1-207ENST00000588738 GADD45BO75293 160 aaPredicted RBP20.36■□□□□ 0.85
ERCC1-207ENST00000588738 GLUD1P00367 558 aa20.36■□□□□ 0.85
ERCC1-207ENST00000588738 IL9P15248 144 aa20.36■□□□□ 0.85
ERCC1-207ENST00000588738 RPL17P18621 184 aaKnown RBP20.36■□□□□ 0.85
ERCC1-207ENST00000588738 PAX3P23760 479 aa20.36■□□□□ 0.85
ERCC1-207ENST00000588738 PNOCQ13519 176 aa20.36■□□□□ 0.85
ERCC1-207ENST00000588738 SYCE2Q6PIF2 218 aa20.36■□□□□ 0.85
ERCC1-207ENST00000588738 ELMSAN1Q6PJG2 1045 aa20.36■□□□□ 0.85
ERCC1-207ENST00000588738 ANKS3Q6ZW76 656 aa20.36■□□□□ 0.85
ERCC1-207ENST00000588738 GLYCTKQ8IVS8 523 aa20.36■□□□□ 0.85
ERCC1-207ENST00000588738 C12orf56Q8IXR9 622 aa20.36■□□□□ 0.85
ERCC1-207ENST00000588738 XXYLT1Q8NBI6 393 aa20.36■□□□□ 0.85
ERCC1-207ENST00000588738 FBXL18Q96ME1 805 aa20.36■□□□□ 0.85
ERCC1-207ENST00000588738 COL25A1Q9BXS0 654 aaPredicted RBP20.36■□□□□ 0.85
ERCC1-207ENST00000588738 RMND1Q9NWS8 449 aa20.36■□□□□ 0.85
ERCC1-207ENST00000588738 SPDYE4A6NLX3 237 aa20.35■□□□□ 0.85
ERCC1-207ENST00000588738 KINO60870 393 aaKnown RBP20.35■□□□□ 0.85
ERCC1-207ENST00000588738 SMC2O95347 1197 aa20.35■□□□□ 0.85
ERCC1-207ENST00000588738 CYP2J2P51589 502 aa20.35■□□□□ 0.85
ERCC1-207ENST00000588738 TFAMQ00059 246 aaKnown RBP20.35■□□□□ 0.85
ERCC1-207ENST00000588738 SURF1Q15526 300 aa20.35■□□□□ 0.85
ERCC1-207ENST00000588738 SMAD2Q15796 467 aaKnown RBP20.35■□□□□ 0.85
ERCC1-207ENST00000588738 SNRNP35Q16560 246 aaKnown RBP20.35■□□□□ 0.85
ERCC1-207ENST00000588738 C9orf57Q5W0N0 161 aa20.35■□□□□ 0.85
ERCC1-207ENST00000588738 CES5AQ6NT32 575 aa20.35■□□□□ 0.85
ERCC1-207ENST00000588738 PALB2Q86YC2 1186 aa20.35■□□□□ 0.85
ERCC1-207ENST00000588738 CBWD2Q8IUF1 395 aa20.35■□□□□ 0.85
ERCC1-207ENST00000588738 EFCAB13Q8IY85 973 aa20.35■□□□□ 0.85
ERCC1-207ENST00000588738 TMEM130Q8N3G9 435 aa20.35■□□□□ 0.85
ERCC1-207ENST00000588738 RDH13Q8NBN7 331 aa20.35■□□□□ 0.85
ERCC1-207ENST00000588738 APPL2Q8NEU8 664 aa20.35■□□□□ 0.85
ERCC1-207ENST00000588738 UHRF1Q96T88 793 aaPredicted RBP20.35■□□□□ 0.85
ERCC1-207ENST00000588738 CLSTN3Q9BQT9 956 aa20.35■□□□□ 0.85
ERCC1-207ENST00000588738 S1PR5Q9H228 398 aa20.35■□□□□ 0.85
ERCC1-207ENST00000588738 PDE11AQ9HCR9 933 aa20.35■□□□□ 0.85
ERCC1-207ENST00000588738 C5orf42Q9H799 3197 aa20.35■□□□□ 0.85
ERCC1-207ENST00000588738 ANO9A1A5B4 782 aa20.34■□□□□ 0.85
ERCC1-207ENST00000588738 PIRO00625 290 aa20.34■□□□□ 0.85
ERCC1-207ENST00000588738 PDXKO00764 312 aa20.34■□□□□ 0.85
ERCC1-207ENST00000588738 WNT7BP56706 349 aa20.34■□□□□ 0.85
ERCC1-207ENST00000588738 LILRA4P59901 499 aa20.34■□□□□ 0.85
ERCC1-207ENST00000588738 ITIH3Q06033 890 aa20.34■□□□□ 0.85
ERCC1-207ENST00000588738 DSTYKQ6XUX3 929 aa20.34■□□□□ 0.85
ERCC1-207ENST00000588738 ELOA2Q8IYF1 753 aaPredicted RBP20.34■□□□□ 0.85
ERCC1-207ENST00000588738 IPO9Q96P70 1041 aaKnown RBP20.34■□□□□ 0.85
ERCC1-207ENST00000588738 GSDMAQ96QA5 445 aa20.34■□□□□ 0.85
ERCC1-207ENST00000588738 APOL5Q9BWW9 433 aa20.34■□□□□ 0.85
ERCC1-207ENST00000588738 KCTD10Q9H3F6 313 aa20.34■□□□□ 0.85
ERCC1-207ENST00000588738 MTRRQ9UBK8 725 aa20.34■□□□□ 0.85
ERCC1-207ENST00000588738 PCDHB8Q9UN66 801 aa20.34■□□□□ 0.85
ERCC1-207ENST00000588738 USP15Q9Y4E8 981 aaPredicted RBP20.34■□□□□ 0.85
ERCC1-207ENST00000588738 BACE2Q9Y5Z0 518 aa20.34■□□□□ 0.85
ERCC1-207ENST00000588738 H7C4K7 107 aa20.33■□□□□ 0.85
ERCC1-207ENST00000588738 M0QZQ0 153 aa20.33■□□□□ 0.85
ERCC1-207ENST00000588738 DLL1O00548 723 aa20.33■□□□□ 0.85
ERCC1-207ENST00000588738 EXOC3O60645 756 aa20.33■□□□□ 0.85
ERCC1-207ENST00000588738 AARSP49588 968 aaKnown RBP eCLIP20.33■□□□□ 0.85
ERCC1-207ENST00000588738 UBE2HP62256 183 aa20.33■□□□□ 0.85
ERCC1-207ENST00000588738 VARS2Q5ST30 1063 aaKnown RBP20.33■□□□□ 0.85
ERCC1-207ENST00000588738 LILRA6Q6PI73 481 aa20.33■□□□□ 0.85
ERCC1-207ENST00000588738 HDAC7Q8WUI4 952 aa20.33■□□□□ 0.85
ERCC1-207ENST00000588738 SMARCE1Q969G3 411 aa20.33■□□□□ 0.85
ERCC1-207ENST00000588738 ADAM7Q9H2U9 754 aa20.33■□□□□ 0.85
ERCC1-207ENST00000588738 PLEKHA4Q9H4M7 779 aa20.33■□□□□ 0.85
ERCC1-207ENST00000588738 SFXN1Q9H9B4 322 aa20.33■□□□□ 0.85
ERCC1-207ENST00000588738 MAN1C1Q9NR34 630 aa20.33■□□□□ 0.85
ERCC1-207ENST00000588738 PRKAG3Q9UGI9 489 aa20.33■□□□□ 0.85
ERCC1-207ENST00000588738 PPEF2O14830 753 aa20.32■□□□□ 0.84
ERCC1-207ENST00000588738 TGM5O43548 720 aa20.32■□□□□ 0.84
ERCC1-207ENST00000588738 CALUO43852 315 aaPredicted RBP20.32■□□□□ 0.84
ERCC1-207ENST00000588738 TMEM191BP0C7N4 346 aa20.32■□□□□ 0.84
ERCC1-207ENST00000588738 SPATA31D3P0C874 917 aa20.32■□□□□ 0.84
ERCC1-207ENST00000588738 OR1D2P34982 312 aa20.32■□□□□ 0.84
ERCC1-207ENST00000588738 RARS2Q5T160 578 aaKnown RBP20.32■□□□□ 0.84
ERCC1-207ENST00000588738 SPATA31D4Q6ZUB0 917 aa20.32■□□□□ 0.84
ERCC1-207ENST00000588738 SLC9A9Q8IVB4 645 aa20.32■□□□□ 0.84
ERCC1-207ENST00000588738 GUF1Q8N442 669 aaKnown RBP20.32■□□□□ 0.84
ERCC1-207ENST00000588738 C12orf76Q8N812 135 aaPredicted RBP20.32■□□□□ 0.84
ERCC1-207ENST00000588738 TMEM174Q8WUU8 243 aa20.32■□□□□ 0.84
ERCC1-207ENST00000588738 ANKRD36BP1Q96IX9 119 aa20.32■□□□□ 0.84
ERCC1-207ENST00000588738 GTPBP4Q9BZE4 634 aaKnown RBP20.32■□□□□ 0.84
ERCC1-207ENST00000588738 MAPK8IP1Q9UQF2 711 aa20.32■□□□□ 0.84
ERCC1-207ENST00000588738 PCDHA5Q9Y5H7 936 aa20.32■□□□□ 0.84
ERCC1-207ENST00000588738 CDY1Q9Y6F8 540 aa20.32■□□□□ 0.84
ERCC1-207ENST00000588738 SCN1AP35498 2009 aa20.32■□□□□ 0.84
ERCC1-207ENST00000588738 ARHGEF37A1IGU5 675 aa20.31■□□□□ 0.84
ERCC1-207ENST00000588738 PRPF40AO75400 957 aaKnown RBP20.31■□□□□ 0.84
ERCC1-207ENST00000588738 PNPLA4P41247 253 aa20.31■□□□□ 0.84
ERCC1-207ENST00000588738 TAF6P49848 677 aa20.31■□□□□ 0.84
ERCC1-207ENST00000588738 RAB33AQ14088 237 aa20.31■□□□□ 0.84
ERCC1-207ENST00000588738 MRPL58Q14197 206 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms