RNA–Protein interactions for RNA: ENST00000588706.1

TUBD1-209, Transcript of tubulin delta 1, humanhuman

TSL 5

Gene TUBD1, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-209ENST00000588706 ROPN1Q9HAT0 212 aaPredicted RBP11.09□□□□□ -0.63
TUBD1-209ENST00000588706 ATP6V0A4Q9HBG4 840 aa11.09□□□□□ -0.63
TUBD1-209ENST00000588706 C1orf112Q9NSG2 853 aa11.09□□□□□ -0.63
TUBD1-209ENST00000588706 SEPT11Q9NVA2 429 aaKnown RBP11.09□□□□□ -0.63
TUBD1-209ENST00000588706 PIM2Q9P1W9 311 aa11.09□□□□□ -0.63
TUBD1-209ENST00000588706 FBXO40Q9UH90 709 aa11.09□□□□□ -0.63
TUBD1-209ENST00000588706 KIAA1217Q5T5P2 1943 aa11.09□□□□□ -0.63
TUBD1-209ENST00000588706 ZNF233A6NK53 670 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 FOXN3O00409 490 aaPredicted RBP11.08□□□□□ -0.64
TUBD1-209ENST00000588706 NDUFAB1O14561 156 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 DKK1O94907 266 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 FAM107AO95990 144 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 F11P03951 625 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 VSIG8P0DPA2 414 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 CNGA1P29973 690 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 INPP5BP32019 993 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 COPB2P35606 906 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 MDH1P40925 334 aaKnown RBP11.08□□□□□ -0.64
TUBD1-209ENST00000588706 BAG6P46379 1132 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 EPHA4P54764 986 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 PEX3P56589 373 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 RWDD2BP57060 319 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 MRPS9P82933 396 aaKnown RBP11.08□□□□□ -0.64
TUBD1-209ENST00000588706 LMNB2Q03252 620 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 GRM1Q13255 1194 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 ITGB3BPQ13352 177 aaPredicted RBP11.08□□□□□ -0.64
TUBD1-209ENST00000588706 PLCB4Q15147 1175 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 ARHGAP44Q17R89 818 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 TTMPQ5BVD1 217 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 XKR3Q5GH77 459 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 DUPD1Q68J44 220 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 RPUSD2Q8IZ73 545 aaKnown RBP11.08□□□□□ -0.64
TUBD1-209ENST00000588706 OLIG1Q8TAK6 271 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 PGM2Q96G03 612 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 TRERF1Q96PN7 1200 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 PABPC3Q9H361 631 aaKnown RBP11.08□□□□□ -0.64
TUBD1-209ENST00000588706 GPAMQ9HCL2 828 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 MRPL47Q9HD33 250 aaKnown RBP11.08□□□□□ -0.64
TUBD1-209ENST00000588706 PICK1Q9NRD5 415 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 RAB20Q9NX57 234 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 WRAP73Q9P2S5 460 aaPredicted RBP11.08□□□□□ -0.64
TUBD1-209ENST00000588706 ZNF112Q9UJU3 913 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 ADAMTS5Q9UNA0 930 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 PCDHB2Q9Y5E7 798 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 PCDHA3Q9Y5H8 950 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 ALG6Q9Y672 507 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 USP3Q9Y6I4 520 aa11.08□□□□□ -0.64
TUBD1-209ENST00000588706 BRCA1P38398 1863 aaKnown RBP11.08□□□□□ -0.64
TUBD1-209ENST00000588706 LOC102724159A0A0B4J2E5 919 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 VWA5AO00534 786 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 NFIBO00712 420 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 EXTL3O43909 919 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 VCAM1P19320 739 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 ECHS1P30084 290 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 ICAM3P32942 547 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 NPTX2P47972 431 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 BACE1P56817 501 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 PPP2R2AP63151 447 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 CXCL9Q07325 125 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 CYP24A1Q07973 514 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 IFFO1Q0D2I5 559 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 STRN3Q13033 797 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 COG2Q14746 738 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 PSMD6Q15008 389 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 PWP2Q15269 919 aaKnown RBP11.07□□□□□ -0.64
TUBD1-209ENST00000588706 NOL9Q5SY16 702 aaKnown RBP11.07□□□□□ -0.64
TUBD1-209ENST00000588706 LIN9Q5TKA1 542 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 DENND2CQ68D51 928 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 ACAD10Q6JQN1 1059 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 SV2AQ7L0J3 742 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 TRMT10CQ7L0Y3 403 aaKnown RBP11.07□□□□□ -0.64
TUBD1-209ENST00000588706 TAOK1Q7L7X3 1001 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 VWA5B2Q8N398 1253 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 CHST13Q8NET6 341 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 ZNF564Q8TBZ8 553 aaPredicted RBP11.07□□□□□ -0.64
TUBD1-209ENST00000588706 NANOS1Q8WY41 292 aaKnown RBP11.07□□□□□ -0.64
TUBD1-209ENST00000588706 RIN2Q8WYP3 895 aaPredicted RBP11.07□□□□□ -0.64
TUBD1-209ENST00000588706 TEX13BQ9BXU2 312 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 DDX47Q9H0S4 455 aaKnown RBP11.07□□□□□ -0.64
TUBD1-209ENST00000588706 THAP2Q9H0W7 228 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 ACAD9Q9H845 621 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 PPCSQ9HAB8 311 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 RNF146Q9NTX7 359 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 EHD2Q9NZN4 543 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 WHRNQ9P202 907 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 AMACRQ9UHK6 382 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 RSPH14Q9UHP6 348 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 NOCTQ9UK39 431 aaKnown RBP11.07□□□□□ -0.64
TUBD1-209ENST00000588706 AJAP1Q9UKB5 411 aaPredicted RBP11.07□□□□□ -0.64
TUBD1-209ENST00000588706 PACSIN2Q9UNF0 486 aaPredicted RBP11.07□□□□□ -0.64
TUBD1-209ENST00000588706 STYXL1Q9Y6J8 313 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 SCINQ9Y6U3 715 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 GRIN2DO15399 1336 aa11.07□□□□□ -0.64
TUBD1-209ENST00000588706 DENND3A2RUS2 1198 aa11.06□□□□□ -0.64
TUBD1-209ENST00000588706 H0YGN5 161 aa11.06□□□□□ -0.64
TUBD1-209ENST00000588706 PSTPIP1O43586 416 aa11.06□□□□□ -0.64
TUBD1-209ENST00000588706 SPOPO43791 374 aa11.06□□□□□ -0.64
TUBD1-209ENST00000588706 GAS8O95995 478 aa11.06□□□□□ -0.64
TUBD1-209ENST00000588706 AGTP01019 485 aa11.06□□□□□ -0.64
TUBD1-209ENST00000588706 SLURP2P0DP57 97 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms